RNA–Protein interactions for RNA: ENST00000566221.5

SPG7-213, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-213ENST00000566221 KRT85P78386 507 aa16.77■□□□□ 0.28
SPG7-213ENST00000566221 ZNF174Q15697 407 aa16.77■□□□□ 0.28
SPG7-213ENST00000566221 FOXD4L6Q3SYB3 417 aaPredicted RBP16.77■□□□□ 0.28
SPG7-213ENST00000566221 ANO1Q5XXA6 986 aa16.77■□□□□ 0.28
SPG7-213ENST00000566221 KCNV1Q6PIU1 500 aa16.77■□□□□ 0.28
SPG7-213ENST00000566221 FOXD4L3Q6VB84 417 aaPredicted RBP16.77■□□□□ 0.28
SPG7-213ENST00000566221 EEPD1Q7L9B9 569 aa16.77■□□□□ 0.28
SPG7-213ENST00000566221 POTEDQ86YR6 584 aa16.77■□□□□ 0.28
SPG7-213ENST00000566221 LENG9Q96B70 501 aa16.77■□□□□ 0.28
SPG7-213ENST00000566221 ZFP91Q96JP5 570 aaPredicted RBP16.77■□□□□ 0.28
SPG7-213ENST00000566221 USP28Q96RU2 1077 aa16.77■□□□□ 0.28
SPG7-213ENST00000566221 WDR11Q9BZH6 1224 aa16.77■□□□□ 0.28
SPG7-213ENST00000566221 KATNBL1Q9H079 304 aa16.77■□□□□ 0.28
SPG7-213ENST00000566221 CFAP45Q9UL16 551 aa16.77■□□□□ 0.28
SPG7-213ENST00000566221 PTPN22Q9Y2R2 807 aa16.77■□□□□ 0.28
SPG7-213ENST00000566221 PTCH2Q9Y6C5 1203 aa16.77■□□□□ 0.28
SPG7-213ENST00000566221 LAD1O00515 517 aa16.76■□□□□ 0.27
SPG7-213ENST00000566221 TBX3O15119 743 aa16.76■□□□□ 0.27
SPG7-213ENST00000566221 MAFGO15525 162 aa16.76■□□□□ 0.27
SPG7-213ENST00000566221 ELNP15502 786 aa16.76■□□□□ 0.27
SPG7-213ENST00000566221 ICAM3P32942 547 aa16.76■□□□□ 0.27
SPG7-213ENST00000566221 NASPP49321 788 aaPredicted RBP16.76■□□□□ 0.27
SPG7-213ENST00000566221 DNM1Q05193 864 aaKnown RBP16.76■□□□□ 0.27
SPG7-213ENST00000566221 ACVR2BQ13705 512 aa16.76■□□□□ 0.27
SPG7-213ENST00000566221 SF3A1Q15459 793 aaKnown RBP16.76■□□□□ 0.27
SPG7-213ENST00000566221 CALCRLQ16602 461 aa16.76■□□□□ 0.27
SPG7-213ENST00000566221 SEPT14Q6ZU15 432 aa16.76■□□□□ 0.27
SPG7-213ENST00000566221 CYP2W1Q8TAV3 490 aa16.76■□□□□ 0.27
SPG7-213ENST00000566221 SCFD2Q8WU76 684 aa16.76■□□□□ 0.27
SPG7-213ENST00000566221 FTOQ9C0B1 505 aaKnown RBP eCLIP16.76■□□□□ 0.27
SPG7-213ENST00000566221 KCNH7Q9NS40 1196 aa16.76■□□□□ 0.27
SPG7-213ENST00000566221 ZHX1Q9UKY1 873 aaPredicted RBP16.76■□□□□ 0.27
SPG7-213ENST00000566221 MYH9P35579 1960 aaKnown RBP16.76■□□□□ 0.27
SPG7-213ENST00000566221 YEATS4O95619 227 aa16.75■□□□□ 0.27
SPG7-213ENST00000566221 OR52Z1P0C646 297 aa16.75■□□□□ 0.27
SPG7-213ENST00000566221 NCLP19338 710 aaKnown RBP16.75■□□□□ 0.27
SPG7-213ENST00000566221 GRK4P32298 578 aa16.75■□□□□ 0.27
SPG7-213ENST00000566221 ETNPPLQ8TBG4 499 aa16.75■□□□□ 0.27
SPG7-213ENST00000566221 TNPO1Q92973 898 aaKnown RBP16.75■□□□□ 0.27
SPG7-213ENST00000566221 KCNMB3Q9NPA1 279 aa16.75■□□□□ 0.27
SPG7-213ENST00000566221 CLIC4Q9Y696 253 aa16.75■□□□□ 0.27
SPG7-213ENST00000566221 MRVI1Q9Y6F6 885 aa16.75■□□□□ 0.27
SPG7-213ENST00000566221 RBM47A0AV96 593 aaKnown RBP16.74■□□□□ 0.27
SPG7-213ENST00000566221 SPATA31C2B4DYI2 1134 aa16.74■□□□□ 0.27
SPG7-213ENST00000566221 MSH4O15457 936 aa16.74■□□□□ 0.27
SPG7-213ENST00000566221 BAG4O95429 457 aaKnown RBP16.74■□□□□ 0.27
SPG7-213ENST00000566221 ARP10275 920 aa16.74■□□□□ 0.27
SPG7-213ENST00000566221 TGFB3P10600 412 aa16.74■□□□□ 0.27
SPG7-213ENST00000566221 CYBAP13498 195 aa16.74■□□□□ 0.27
SPG7-213ENST00000566221 ATP2C1P98194 919 aaPredicted RBP16.74■□□□□ 0.27
SPG7-213ENST00000566221 CEBPZQ03701 1054 aaKnown RBP16.74■□□□□ 0.27
SPG7-213ENST00000566221 PTGDRQ13258 359 aa16.74■□□□□ 0.27
SPG7-213ENST00000566221 SEMA3FQ13275 785 aa16.74■□□□□ 0.27
SPG7-213ENST00000566221 TTLL4Q14679 1199 aa16.74■□□□□ 0.27
SPG7-213ENST00000566221 STK38Q15208 465 aa16.74■□□□□ 0.27
SPG7-213ENST00000566221 PKN2Q16513 984 aaKnown RBP16.74■□□□□ 0.27
SPG7-213ENST00000566221 TAPT1Q6NXT6 567 aa16.74■□□□□ 0.27
SPG7-213ENST00000566221 CLEC17AQ6ZS10 378 aa16.74■□□□□ 0.27
SPG7-213ENST00000566221 SLFN12Q8IYM2 578 aa16.74■□□□□ 0.27
SPG7-213ENST00000566221 FAM20AQ96MK3 541 aa16.74■□□□□ 0.27
SPG7-213ENST00000566221 ZNF577Q9BSK1 485 aa16.74■□□□□ 0.27
SPG7-213ENST00000566221 AGO4Q9HCK5 861 aaKnown RBP16.74■□□□□ 0.27
SPG7-213ENST00000566221 TFIP11Q9UBB9 837 aaKnown RBP16.74■□□□□ 0.27
SPG7-213ENST00000566221 MORC2Q9Y6X9 1032 aaPredicted RBP16.74■□□□□ 0.27
SPG7-213ENST00000566221 IPO5O00410 1097 aaKnown RBP16.73■□□□□ 0.27
SPG7-213ENST00000566221 MARCH6O60337 910 aa16.73■□□□□ 0.27
SPG7-213ENST00000566221 ZNF865P0CJ78 1059 aaPredicted RBP16.73■□□□□ 0.27
SPG7-213ENST00000566221 PRKAR2AP13861 404 aaKnown RBP16.73■□□□□ 0.27
SPG7-213ENST00000566221 PRPHP41219 470 aa16.73■□□□□ 0.27
SPG7-213ENST00000566221 CACNB2Q08289 660 aaPredicted RBP16.73■□□□□ 0.27
SPG7-213ENST00000566221 SLC39A14Q15043 492 aa16.73■□□□□ 0.27
SPG7-213ENST00000566221 PTPAQ15257 358 aa16.73■□□□□ 0.27
SPG7-213ENST00000566221 ARL6IP4Q66PJ3 421 aaKnown RBP16.73■□□□□ 0.27
SPG7-213ENST00000566221 C4orf32Q8N8J7 132 aa16.73■□□□□ 0.27
SPG7-213ENST00000566221 GIMAP8Q8ND71 665 aaPredicted RBP16.73■□□□□ 0.27
SPG7-213ENST00000566221 SLC5A5Q92911 643 aa16.73■□□□□ 0.27
SPG7-213ENST00000566221 MTMR9Q96QG7 549 aa16.73■□□□□ 0.27
SPG7-213ENST00000566221 SENP7Q9BQF6 1050 aa16.73■□□□□ 0.27
SPG7-213ENST00000566221 SCAND2PQ9GZW5 306 aaPredicted RBP16.73■□□□□ 0.27
SPG7-213ENST00000566221 TMEM60Q9H2L4 133 aa16.73■□□□□ 0.27
SPG7-213ENST00000566221 PDGFCQ9NRA1 345 aa16.73■□□□□ 0.27
SPG7-213ENST00000566221 NFASCO94856 1347 aa16.72■□□□□ 0.27
SPG7-213ENST00000566221 LOXHD1Q8IVV2 1947 aa16.72■□□□□ 0.27
SPG7-213ENST00000566221 NKRFO15226 690 aaKnown RBP eCLIP16.72■□□□□ 0.27
SPG7-213ENST00000566221 INHAP05111 366 aa16.72■□□□□ 0.27
SPG7-213ENST00000566221 TXNP10599 105 aaKnown RBP16.72■□□□□ 0.27
SPG7-213ENST00000566221 KCNA2P16389 499 aa16.72■□□□□ 0.27
SPG7-213ENST00000566221 UBA1P22314 1058 aaKnown RBP16.72■□□□□ 0.27
SPG7-213ENST00000566221 CCDC144BQ3MJ40 725 aa16.72■□□□□ 0.27
SPG7-213ENST00000566221 SLC9C1Q4G0N8 1177 aa16.72■□□□□ 0.27
SPG7-213ENST00000566221 MAP3K21Q5TCX8 1036 aa16.72■□□□□ 0.27
SPG7-213ENST00000566221 IQSEC1Q6DN90 963 aa16.72■□□□□ 0.27
SPG7-213ENST00000566221 CCDC62Q6P9F0 684 aa16.72■□□□□ 0.27
SPG7-213ENST00000566221 FBXO46Q6PJ61 603 aaPredicted RBP16.72■□□□□ 0.27
SPG7-213ENST00000566221 LINC00301Q8NCQ3 95 aa16.72■□□□□ 0.27
SPG7-213ENST00000566221 KCNG4Q8TDN1 519 aa16.72■□□□□ 0.27
SPG7-213ENST00000566221 HAS1Q92839 578 aa16.72■□□□□ 0.27
SPG7-213ENST00000566221 SPATA32Q96LK8 384 aa16.72■□□□□ 0.27
SPG7-213ENST00000566221 RIT2Q99578 217 aa16.72■□□□□ 0.27
SPG7-213ENST00000566221 SDF4Q9BRK5 362 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms