RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 ANKRD30AQ9BXX3 1397 aa5.72□□□□□ -1.49
LINC00561-201ENST00000565815 PDE8AO60658 829 aa5.72□□□□□ -1.49
LINC00561-201ENST00000565815 PPP1R11O60927 126 aaPredicted RBP5.72□□□□□ -1.49
LINC00561-201ENST00000565815 FPR2P25090 351 aa5.72□□□□□ -1.49
LINC00561-201ENST00000565815 TRHRP34981 398 aaPredicted RBP5.72□□□□□ -1.49
LINC00561-201ENST00000565815 AMPD3Q01432 767 aa5.72□□□□□ -1.49
LINC00561-201ENST00000565815 FSTL4Q6MZW2 842 aa5.72□□□□□ -1.49
LINC00561-201ENST00000565815 POMZP3Q6PJE2 187 aa5.72□□□□□ -1.49
LINC00561-201ENST00000565815 RCBTB1Q8NDN9 531 aa5.72□□□□□ -1.49
LINC00561-201ENST00000565815 PIWIL2Q8TC59 973 aaKnown RBP5.72□□□□□ -1.49
LINC00561-201ENST00000565815 PHF20Q9BVI0 1012 aa5.72□□□□□ -1.49
LINC00561-201ENST00000565815 CYP26B1Q9NR63 512 aa5.72□□□□□ -1.49
LINC00561-201ENST00000565815 GULP1Q9UBP9 304 aa5.72□□□□□ -1.49
LINC00561-201ENST00000565815 DIS3Q9Y2L1 958 aaKnown RBP5.72□□□□□ -1.49
LINC00561-201ENST00000565815 KCNK3O14649 394 aa5.72□□□□□ -1.49
LINC00561-201ENST00000565815 PPM1GO15355 546 aaPredicted RBP5.72□□□□□ -1.49
LINC00561-201ENST00000565815 ZNF205O95201 554 aa5.72□□□□□ -1.49
LINC00561-201ENST00000565815 SDHBP21912 280 aa5.72□□□□□ -1.49
LINC00561-201ENST00000565815 TACR1P25103 407 aa5.72□□□□□ -1.49
LINC00561-201ENST00000565815 SEPT7Q16181 437 aaKnown RBP5.72□□□□□ -1.49
LINC00561-201ENST00000565815 LHFPL2Q6ZUX7 228 aa5.72□□□□□ -1.49
LINC00561-201ENST00000565815 ZNF669Q96BR6 464 aaPredicted RBP5.72□□□□□ -1.49
LINC00561-201ENST00000565815 COL22A1Q8NFW1 1626 aaPredicted RBP5.72□□□□□ -1.49
LINC00561-201ENST00000565815 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.71□□□□□ -1.49
LINC00561-201ENST00000565815 KPNA6O60684 536 aa5.71□□□□□ -1.49
LINC00561-201ENST00000565815 SEPHS1P49903 392 aa5.71□□□□□ -1.49
LINC00561-201ENST00000565815 POU4F1Q01851 419 aa5.71□□□□□ -1.49
LINC00561-201ENST00000565815 PCBP1Q15365 356 aaKnown RBP eCLIP5.71□□□□□ -1.49
LINC00561-201ENST00000565815 BCL7CQ8WUZ0 217 aaPredicted RBP5.71□□□□□ -1.49
LINC00561-201ENST00000565815 G6PC3Q9BUM1 346 aa5.71□□□□□ -1.49
LINC00561-201ENST00000565815 SF3B6Q9Y3B4 125 aaKnown RBP5.71□□□□□ -1.49
LINC00561-201ENST00000565815 PCDHA2Q9Y5H9 948 aa5.71□□□□□ -1.49
LINC00561-201ENST00000565815 MST1RQ04912 1400 aa5.71□□□□□ -1.5
LINC00561-201ENST00000565815 FGF10O15520 208 aaPredicted RBP5.71□□□□□ -1.5
LINC00561-201ENST00000565815 GRB10Q13322 594 aa5.71□□□□□ -1.5
LINC00561-201ENST00000565815 IKZF1Q13422 519 aa5.71□□□□□ -1.5
LINC00561-201ENST00000565815 NLRP10Q86W26 655 aa5.71□□□□□ -1.5
LINC00561-201ENST00000565815 SCUBE1Q8IWY4 988 aa5.71□□□□□ -1.5
LINC00561-201ENST00000565815 RPUSD2Q8IZ73 545 aaKnown RBP5.71□□□□□ -1.5
LINC00561-201ENST00000565815 KCTD13Q8WZ19 329 aa5.71□□□□□ -1.5
LINC00561-201ENST00000565815 HRASLS5Q96KN8 279 aa5.71□□□□□ -1.5
LINC00561-201ENST00000565815 VPS8Q8N3P4 1428 aa5.71□□□□□ -1.5
LINC00561-201ENST00000565815 CROCC2H7BZ55 1655 aa5.71□□□□□ -1.5
LINC00561-201ENST00000565815 GSNP06396 782 aa5.7□□□□□ -1.5
LINC00561-201ENST00000565815 SRGAP2CP0DJJ0 459 aa5.7□□□□□ -1.5
LINC00561-201ENST00000565815 LRRTM3Q86VH5 581 aa5.7□□□□□ -1.5
LINC00561-201ENST00000565815 TEX2Q8IWB9 1127 aa5.7□□□□□ -1.5
LINC00561-201ENST00000565815 LINC00116Q8NCU8 138 aa5.7□□□□□ -1.5
LINC00561-201ENST00000565815 DPF3Q92784 378 aa5.7□□□□□ -1.5
LINC00561-201ENST00000565815 PLCD4Q9BRC7 762 aa5.7□□□□□ -1.5
LINC00561-201ENST00000565815 LRPPRCP42704 1394 aaKnown RBP5.7□□□□□ -1.5
LINC00561-201ENST00000565815 SETBP1Q9Y6X0 1596 aa5.7□□□□□ -1.5
LINC00561-201ENST00000565815 CFAP65Q6ZU64 1925 aaKnown RBP5.7□□□□□ -1.5
LINC00561-201ENST00000565815 A0A087WZG4 1122 aa5.7□□□□□ -1.5
LINC00561-201ENST00000565815 SCG5P05408 212 aa5.7□□□□□ -1.5
LINC00561-201ENST00000565815 MSL3P1P0C860 447 aa5.7□□□□□ -1.5
LINC00561-201ENST00000565815 CDKN1CP49918 316 aaPredicted RBP5.7□□□□□ -1.5
LINC00561-201ENST00000565815 CLCN7P51798 805 aa5.7□□□□□ -1.5
LINC00561-201ENST00000565815 HK2P52789 917 aa5.7□□□□□ -1.5
LINC00561-201ENST00000565815 TM4SF20Q53R12 229 aa5.7□□□□□ -1.5
LINC00561-201ENST00000565815 NINJ1Q92982 152 aa5.7□□□□□ -1.5
LINC00561-201ENST00000565815 HHIPL1Q96JK4 782 aa5.7□□□□□ -1.5
LINC00561-201ENST00000565815 C19orf73Q9NVV2 129 aa5.7□□□□□ -1.5
LINC00561-201ENST00000565815 RWDD3Q9Y3V2 267 aa5.7□□□□□ -1.5
LINC00561-201ENST00000565815 ADAMTS13Q76LX8 1427 aa5.7□□□□□ -1.5
LINC00561-201ENST00000565815 ADGRL3Q9HAR2 1447 aa5.7□□□□□ -1.5
LINC00561-201ENST00000565815 TMEM131LA2VDJ0 1609 aa5.7□□□□□ -1.5
LINC00561-201ENST00000565815 JMJD7P0C870 316 aa5.69□□□□□ -1.5
LINC00561-201ENST00000565815 NAT2P11245 290 aa5.69□□□□□ -1.5
LINC00561-201ENST00000565815 PCBP3P57721 371 aaKnown RBP5.69□□□□□ -1.5
LINC00561-201ENST00000565815 SUMO1P63165 101 aaKnown RBP5.69□□□□□ -1.5
LINC00561-201ENST00000565815 PKN3Q6P5Z2 889 aa5.69□□□□□ -1.5
LINC00561-201ENST00000565815 RNF180Q86T96 592 aa5.69□□□□□ -1.5
LINC00561-201ENST00000565815 RBM12BQ8IXT5 1001 aaKnown RBP5.69□□□□□ -1.5
LINC00561-201ENST00000565815 SLAMF8Q9P0V8 285 aa5.69□□□□□ -1.5
LINC00561-201ENST00000565815 CCDC39Q9UFE4 941 aa5.69□□□□□ -1.5
LINC00561-201ENST00000565815 C7orf72A4D263 438 aa5.69□□□□□ -1.5
LINC00561-201ENST00000565815 NOTOA8MTQ0 251 aa5.69□□□□□ -1.5
LINC00561-201ENST00000565815 HOXC12P31275 282 aa5.69□□□□□ -1.5
LINC00561-201ENST00000565815 CD97P48960 835 aa5.69□□□□□ -1.5
LINC00561-201ENST00000565815 GSTCDQ8NEC7 633 aa5.69□□□□□ -1.5
LINC00561-201ENST00000565815 COX4I2Q96KJ9 171 aa5.69□□□□□ -1.5
LINC00561-201ENST00000565815 JAM3Q9BX67 310 aa5.69□□□□□ -1.5
LINC00561-201ENST00000565815 PLA2G2DQ9UNK4 145 aa5.69□□□□□ -1.5
LINC00561-201ENST00000565815 COL4A3BPQ9Y5P4 624 aa5.69□□□□□ -1.5
LINC00561-201ENST00000565815 PRAG1Q86YV5 1406 aa5.69□□□□□ -1.5
LINC00561-201ENST00000565815 XRN1Q8IZH2 1706 aaKnown RBP5.69□□□□□ -1.5
LINC00561-201ENST00000565815 GCC2Q8IWJ2 1684 aa5.69□□□□□ -1.5
LINC00561-201ENST00000565815 NPHP3-ACAD11A0A0J9YXS1 232 aa5.68□□□□□ -1.5
LINC00561-201ENST00000565815 ID4P47928 161 aa5.68□□□□□ -1.5
LINC00561-201ENST00000565815 ZP2Q05996 745 aa5.68□□□□□ -1.5
LINC00561-201ENST00000565815 MAP4K2Q12851 820 aa5.68□□□□□ -1.5
LINC00561-201ENST00000565815 SIRT2Q8IXJ6 389 aa5.68□□□□□ -1.5
LINC00561-201ENST00000565815 PTCHD1Q96NR3 888 aa5.68□□□□□ -1.5
LINC00561-201ENST00000565815 JMJD8Q96S16 334 aa5.68□□□□□ -1.5
LINC00561-201ENST00000565815 CDIP1Q9H305 208 aa5.68□□□□□ -1.5
LINC00561-201ENST00000565815 TRIT1Q9H3H1 467 aaKnown RBP5.68□□□□□ -1.5
LINC00561-201ENST00000565815 TCRBV16S1A1N1A0A5B0 115 aa5.68□□□□□ -1.5
LINC00561-201ENST00000565815 ZNF891A8MT65 544 aaPredicted RBP5.68□□□□□ -1.5
LINC00561-201ENST00000565815 FAM50AQ14320 339 aaKnown RBP5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms