RNA–Protein interactions for RNA: ENST00000564970.1

PTPN9-204, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-204ENST00000564970 A0A0J9YVX5 310 aa6.85□□□□□ -1.31
PTPN9-204ENST00000564970 VPS37CA5D8V6 355 aaPredicted RBP6.85□□□□□ -1.31
PTPN9-204ENST00000564970 CFAP69A5D8W1 941 aa6.85□□□□□ -1.31
PTPN9-204ENST00000564970 ORC4O43929 436 aa6.85□□□□□ -1.31
PTPN9-204ENST00000564970 SUPT3HO75486 399 aa6.85□□□□□ -1.31
PTPN9-204ENST00000564970 ASMTLO95671 621 aa6.85□□□□□ -1.31
PTPN9-204ENST00000564970 SERPINC1P01008 464 aa6.85□□□□□ -1.31
PTPN9-204ENST00000564970 KRT6AP02538 564 aa6.85□□□□□ -1.31
PTPN9-204ENST00000564970 KRT6BP04259 564 aa6.85□□□□□ -1.31
PTPN9-204ENST00000564970 CYP2C9P11712 490 aa6.85□□□□□ -1.31
PTPN9-204ENST00000564970 PSMA5P28066 241 aa6.85□□□□□ -1.31
PTPN9-204ENST00000564970 HALP42357 657 aa6.85□□□□□ -1.31
PTPN9-204ENST00000564970 ACADSBP45954 432 aa6.85□□□□□ -1.31
PTPN9-204ENST00000564970 TMED10P49755 219 aaKnown RBP6.85□□□□□ -1.31
PTPN9-204ENST00000564970 RASSF2P50749 326 aa6.85□□□□□ -1.31
PTPN9-204ENST00000564970 CYP4A11Q02928 519 aa6.85□□□□□ -1.31
PTPN9-204ENST00000564970 MCL1Q07820 350 aa6.85□□□□□ -1.31
PTPN9-204ENST00000564970 TMEM62Q0P6H9 643 aa6.85□□□□□ -1.31
PTPN9-204ENST00000564970 HSPA14Q0VDF9 509 aa6.85□□□□□ -1.31
PTPN9-204ENST00000564970 ITGB3BPQ13352 177 aaPredicted RBP6.85□□□□□ -1.31
PTPN9-204ENST00000564970 R3HDM1Q15032 1099 aaKnown RBP6.85□□□□□ -1.31
PTPN9-204ENST00000564970 DDB1Q16531 1140 aa6.85□□□□□ -1.31
PTPN9-204ENST00000564970 ZNF569Q5MCW4 686 aa6.85□□□□□ -1.31
PTPN9-204ENST00000564970 CYP4A22Q5TCH4 519 aa6.85□□□□□ -1.31
PTPN9-204ENST00000564970 NDUFAF5Q5TEU4 345 aa6.85□□□□□ -1.31
PTPN9-204ENST00000564970 KRT28Q7Z3Y7 464 aa6.85□□□□□ -1.31
PTPN9-204ENST00000564970 CPLX4Q7Z7G2 160 aa6.85□□□□□ -1.31
PTPN9-204ENST00000564970 ZNF598Q86UK7 904 aaKnown RBP6.85□□□□□ -1.31
PTPN9-204ENST00000564970 TTC30AQ86WT1 665 aa6.85□□□□□ -1.31
PTPN9-204ENST00000564970 DDX42Q86XP3 938 aaKnown RBP eCLIP6.85□□□□□ -1.31
PTPN9-204ENST00000564970 ST13P4Q8IZP2 240 aaPredicted RBP6.85□□□□□ -1.31
PTPN9-204ENST00000564970 IQCKQ8N0W5 287 aa6.85□□□□□ -1.31
PTPN9-204ENST00000564970 NUP93Q8N1F7 819 aa6.85□□□□□ -1.31
PTPN9-204ENST00000564970 AGGF1Q8N302 714 aaeCLIP6.85□□□□□ -1.31
PTPN9-204ENST00000564970 PPFIBP2Q8ND30 876 aa6.85□□□□□ -1.31
PTPN9-204ENST00000564970 ENOX1Q8TC92 643 aaKnown RBP6.85□□□□□ -1.31
PTPN9-204ENST00000564970 NOC3LQ8WTT2 800 aaKnown RBP6.85□□□□□ -1.31
PTPN9-204ENST00000564970 EVI5LQ96CN4 794 aa6.85□□□□□ -1.31
PTPN9-204ENST00000564970 CHMP6Q96FZ7 201 aa6.85□□□□□ -1.31
PTPN9-204ENST00000564970 RNPC3Q96LT9 517 aaKnown RBP6.85□□□□□ -1.31
PTPN9-204ENST00000564970 TMEM237Q96Q45 408 aa6.85□□□□□ -1.31
PTPN9-204ENST00000564970 SEC62Q99442 399 aaKnown RBP6.85□□□□□ -1.31
PTPN9-204ENST00000564970 PRPF18Q99633 342 aaKnown RBP6.85□□□□□ -1.31
PTPN9-204ENST00000564970 SYT15Q9BQS2 421 aa6.85□□□□□ -1.31
PTPN9-204ENST00000564970 C2orf49Q9BVC5 232 aaPredicted RBP6.85□□□□□ -1.31
PTPN9-204ENST00000564970 NUF2Q9BZD4 464 aa6.85□□□□□ -1.31
PTPN9-204ENST00000564970 KLHL4Q9C0H6 718 aa6.85□□□□□ -1.31
PTPN9-204ENST00000564970 CCDC134Q9H6E4 229 aa6.85□□□□□ -1.31
PTPN9-204ENST00000564970 SUGCTQ9HAC7 445 aa6.85□□□□□ -1.31
PTPN9-204ENST00000564970 TCF7L2Q9NQB0 619 aa6.85□□□□□ -1.31
PTPN9-204ENST00000564970 PICK1Q9NRD5 415 aa6.85□□□□□ -1.31
PTPN9-204ENST00000564970 DLGAP2Q9P1A6 1054 aa6.85□□□□□ -1.31
PTPN9-204ENST00000564970 ZNHIT2Q9UHR6 403 aa6.85□□□□□ -1.31
PTPN9-204ENST00000564970 MAFFQ9ULX9 164 aa6.85□□□□□ -1.31
PTPN9-204ENST00000564970 GIT1Q9Y2X7 761 aa6.85□□□□□ -1.31
PTPN9-204ENST00000564970 SAR1BQ9Y6B6 198 aa6.85□□□□□ -1.31
PTPN9-204ENST00000564970 ARHGEF5Q12774 1597 aa6.85□□□□□ -1.31
PTPN9-204ENST00000564970 CDK12Q9NYV4 1490 aaPredicted RBP6.85□□□□□ -1.31
PTPN9-204ENST00000564970 ZFYVE9O95405 1425 aa6.84□□□□□ -1.31
PTPN9-204ENST00000564970 GAKO14976 1311 aa6.84□□□□□ -1.31
PTPN9-204ENST00000564970 MAP3K15Q6ZN16 1313 aa6.84□□□□□ -1.31
PTPN9-204ENST00000564970 A0A088AWK7 358 aa6.84□□□□□ -1.31
PTPN9-204ENST00000564970 A0A1B0GVG6 124 aa6.84□□□□□ -1.31
PTPN9-204ENST00000564970 SPDYE5A6NIY4 337 aa6.84□□□□□ -1.31
PTPN9-204ENST00000564970 GCOM1H8Y6P7 765 aaPredicted RBP6.84□□□□□ -1.31
PTPN9-204ENST00000564970 TNFRSF10AO00220 468 aa6.84□□□□□ -1.31
PTPN9-204ENST00000564970 HGSO14964 777 aaPredicted RBP6.84□□□□□ -1.31
PTPN9-204ENST00000564970 SEMA3EO15041 775 aa6.84□□□□□ -1.31
PTPN9-204ENST00000564970 SGTAO43765 313 aa6.84□□□□□ -1.31
PTPN9-204ENST00000564970 ECE2O60344 883 aa6.84□□□□□ -1.31
PTPN9-204ENST00000564970 DIAPH1O60610 1272 aaKnown RBP6.84□□□□□ -1.31
PTPN9-204ENST00000564970 ZC3H11AO75152 810 aaKnown RBP eCLIP6.84□□□□□ -1.31
PTPN9-204ENST00000564970 TJP3O95049 919 aa6.84□□□□□ -1.31
PTPN9-204ENST00000564970 FGFR1OPO95684 399 aaKnown RBP6.84□□□□□ -1.31
PTPN9-204ENST00000564970 LDHAP00338 332 aaKnown RBP6.84□□□□□ -1.31
PTPN9-204ENST00000564970 PIM1P11309 404 aaPredicted RBP6.84□□□□□ -1.31
PTPN9-204ENST00000564970 M6PRP20645 277 aa6.84□□□□□ -1.31
PTPN9-204ENST00000564970 ENPP1P22413 925 aa6.84□□□□□ -1.31
PTPN9-204ENST00000564970 VHLP40337 213 aa6.84□□□□□ -1.31
PTPN9-204ENST00000564970 ETV3P41162 512 aa6.84□□□□□ -1.31
PTPN9-204ENST00000564970 MSH2P43246 934 aa6.84□□□□□ -1.31
PTPN9-204ENST00000564970 KRT6CP48668 564 aa6.84□□□□□ -1.31
PTPN9-204ENST00000564970 MXI1P50539 228 aa6.84□□□□□ -1.31
PTPN9-204ENST00000564970 PLOD1Q02809 727 aaPredicted RBP6.84□□□□□ -1.31
PTPN9-204ENST00000564970 PKD2Q13563 968 aa6.84□□□□□ -1.31
PTPN9-204ENST00000564970 COG2Q14746 738 aa6.84□□□□□ -1.31
PTPN9-204ENST00000564970 KIF22Q14807 665 aa6.84□□□□□ -1.31
PTPN9-204ENST00000564970 RASA2Q15283 850 aa6.84□□□□□ -1.31
PTPN9-204ENST00000564970 CNPY1Q3B7I2 92 aa6.84□□□□□ -1.31
PTPN9-204ENST00000564970 TWF2Q6IBS0 349 aaKnown RBP6.84□□□□□ -1.31
PTPN9-204ENST00000564970 TTC23LQ6PF05 361 aa6.84□□□□□ -1.31
PTPN9-204ENST00000564970 SLC2A7Q6PXP3 512 aa6.84□□□□□ -1.31
PTPN9-204ENST00000564970 SLC4A10Q6U841 1118 aa6.84□□□□□ -1.31
PTPN9-204ENST00000564970 SND1Q7KZF4 910 aaKnown RBP eCLIP6.84□□□□□ -1.31
PTPN9-204ENST00000564970 TRPM8Q7Z2W7 1104 aa6.84□□□□□ -1.31
PTPN9-204ENST00000564970 VPS36Q86VN1 386 aa6.84□□□□□ -1.31
PTPN9-204ENST00000564970 SCUBE1Q8IWY4 988 aa6.84□□□□□ -1.31
PTPN9-204ENST00000564970 IFT20Q8IY31 132 aa6.84□□□□□ -1.31
PTPN9-204ENST00000564970 ENAHQ8N8S7 591 aaPredicted RBP6.84□□□□□ -1.31
PTPN9-204ENST00000564970 ENGASEQ8NFI3 743 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms