RNA–Protein interactions for RNA: ENST00000564757.5

SCAPER-213, Transcript of S-phase cyclin A associated protein in the ER, human

TSL 5

Gene SCAPER, Length 626 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCAPER-213	ENST00000564757	PDE8A	O60658	829 aa		4.97	□□□□□ -1.61
SCAPER-213	ENST00000564757	VAMP4	O75379	141 aa		4.97	□□□□□ -1.61
SCAPER-213	ENST00000564757	ENDOU	P21128	410 aa	Known RBP	4.97	□□□□□ -1.61
SCAPER-213	ENST00000564757	CNR2	P34972	360 aa		4.97	□□□□□ -1.61
SCAPER-213	ENST00000564757	POU4F1	Q01851	419 aa		4.97	□□□□□ -1.61
SCAPER-213	ENST00000564757	NR1I3	Q14994	352 aa		4.97	□□□□□ -1.61
SCAPER-213	ENST00000564757	FNDC3B	Q53EP0	1204 aa	Known RBP	4.97	□□□□□ -1.61
SCAPER-213	ENST00000564757	WWC2	Q6AWC2	1192 aa		4.97	□□□□□ -1.61
SCAPER-213	ENST00000564757	GTF2IRD2B	Q6EKJ0	949 aa		4.97	□□□□□ -1.61
SCAPER-213	ENST00000564757	GTF2IRD2	Q86UP8	949 aa		4.97	□□□□□ -1.61
SCAPER-213	ENST00000564757	ARHGEF39	Q8N4T4	335 aa		4.97	□□□□□ -1.61
SCAPER-213	ENST00000564757	KISS1R	Q969F8	398 aa	Predicted RBP	4.97	□□□□□ -1.61
SCAPER-213	ENST00000564757	JMJD8	Q96S16	334 aa		4.97	□□□□□ -1.61
SCAPER-213	ENST00000564757	CEP89	Q96ST8	783 aa		4.97	□□□□□ -1.61
SCAPER-213	ENST00000564757	MRPL4	Q9BYD3	311 aa	Known RBP	4.97	□□□□□ -1.61
SCAPER-213	ENST00000564757	CAAP1	Q9H8G2	361 aa		4.97	□□□□□ -1.61
SCAPER-213	ENST00000564757	HCFC2	Q9Y5Z7	792 aa		4.97	□□□□□ -1.61
SCAPER-213	ENST00000564757	DUSP10	Q9Y6W6	482 aa		4.97	□□□□□ -1.61
SCAPER-213	ENST00000564757	PMF1-BGLAP	U3KQ54	211 aa		4.97	□□□□□ -1.61
SCAPER-213	ENST00000564757	SHOX	O15266	292 aa		4.96	□□□□□ -1.62
SCAPER-213	ENST00000564757	RFPL3	O75679	317 aa		4.96	□□□□□ -1.62
SCAPER-213	ENST00000564757	ZNF205	O95201	554 aa		4.96	□□□□□ -1.62
SCAPER-213	ENST00000564757	CD3E	P07766	207 aa		4.96	□□□□□ -1.62
SCAPER-213	ENST00000564757	FBLN1	P23142	703 aa		4.96	□□□□□ -1.62
SCAPER-213	ENST00000564757	HOXC12	P31275	282 aa		4.96	□□□□□ -1.62
SCAPER-213	ENST00000564757	NEK4	P51957	841 aa		4.96	□□□□□ -1.62
SCAPER-213	ENST00000564757	GABRE	P78334	506 aa		4.96	□□□□□ -1.62
SCAPER-213	ENST00000564757	FOXO4	P98177	505 aa		4.96	□□□□□ -1.62
SCAPER-213	ENST00000564757	AMPD3	Q01432	767 aa		4.96	□□□□□ -1.62
SCAPER-213	ENST00000564757	TARBP2	Q15633	366 aa	Known RBP	4.96	□□□□□ -1.62
SCAPER-213	ENST00000564757	TM4SF20	Q53R12	229 aa		4.96	□□□□□ -1.62
SCAPER-213	ENST00000564757	USP53	Q70EK8	1073 aa		4.96	□□□□□ -1.62
SCAPER-213	ENST00000564757	UBR7	Q8N806	425 aa		4.96	□□□□□ -1.62
SCAPER-213	ENST00000564757	ZNF513	Q8N8E2	541 aa	Predicted RBP	4.96	□□□□□ -1.62
SCAPER-213	ENST00000564757	SLC16A11	Q8NCK7	471 aa		4.96	□□□□□ -1.62
SCAPER-213	ENST00000564757	ZNF526	Q8TF50	670 aa	Predicted RBP	4.96	□□□□□ -1.62
SCAPER-213	ENST00000564757	MRGPRX3	Q96LB0	322 aa		4.96	□□□□□ -1.62
SCAPER-213	ENST00000564757	CCDC140	Q96MF4	163 aa		4.96	□□□□□ -1.62
SCAPER-213	ENST00000564757	AP5S1	Q9NUS5	200 aa		4.96	□□□□□ -1.62
SCAPER-213	ENST00000564757	SMPD4	Q9NXE4	827 aa		4.96	□□□□□ -1.62
SCAPER-213	ENST00000564757	SRRD	Q9UH36	339 aa		4.96	□□□□□ -1.62
SCAPER-213	ENST00000564757	MCM8	Q9UJA3	840 aa		4.96	□□□□□ -1.62
SCAPER-213	ENST00000564757	BLACE	A4D250	179 aa		4.95	□□□□□ -1.62
SCAPER-213	ENST00000564757		H0Y8X5	98 aa		4.95	□□□□□ -1.62
SCAPER-213	ENST00000564757	STXBP3	O00186	592 aa		4.95	□□□□□ -1.62
SCAPER-213	ENST00000564757	OPA1	O60313	960 aa		4.95	□□□□□ -1.62
SCAPER-213	ENST00000564757	DLX3	O60479	287 aa		4.95	□□□□□ -1.62
SCAPER-213	ENST00000564757	EFCAB14	O75071	495 aa		4.95	□□□□□ -1.62
SCAPER-213	ENST00000564757	CP	P00450	1065 aa		4.95	□□□□□ -1.62
SCAPER-213	ENST00000564757	S100B	P04271	92 aa	Predicted RBP	4.95	□□□□□ -1.62
SCAPER-213	ENST00000564757	GSN	P06396	782 aa		4.95	□□□□□ -1.62
SCAPER-213	ENST00000564757	ATF2	P15336	505 aa		4.95	□□□□□ -1.62
SCAPER-213	ENST00000564757	BMP8B	P34820	402 aa		4.95	□□□□□ -1.62
SCAPER-213	ENST00000564757	FLT3	P36888	993 aa		4.95	□□□□□ -1.62
SCAPER-213	ENST00000564757	CTSK	P43235	329 aa		4.95	□□□□□ -1.62
SCAPER-213	ENST00000564757	NOP2	P46087	812 aa	Known RBP	4.95	□□□□□ -1.62
SCAPER-213	ENST00000564757	HTRA3	P83110	453 aa		4.95	□□□□□ -1.62
SCAPER-213	ENST00000564757	MVK	Q03426	396 aa		4.95	□□□□□ -1.62
SCAPER-213	ENST00000564757	GRB10	Q13322	594 aa		4.95	□□□□□ -1.62
SCAPER-213	ENST00000564757	SF1	Q15637	639 aa	Known RBP	4.95	□□□□□ -1.62
SCAPER-213	ENST00000564757	KRT26	Q7Z3Y9	468 aa		4.95	□□□□□ -1.62
SCAPER-213	ENST00000564757	SAPCD2	Q86UD0	394 aa		4.95	□□□□□ -1.62
SCAPER-213	ENST00000564757	LRRTM3	Q86VH5	581 aa		4.95	□□□□□ -1.62
SCAPER-213	ENST00000564757	PRPF38A	Q8NAV1	312 aa	Known RBP	4.95	□□□□□ -1.62
SCAPER-213	ENST00000564757	TMEM52	Q8NDY8	209 aa		4.95	□□□□□ -1.62
SCAPER-213	ENST00000564757	ATL2	Q8NHH9	583 aa		4.95	□□□□□ -1.62
SCAPER-213	ENST00000564757	DDX1	Q92499	740 aa	Known RBP	4.95	□□□□□ -1.62
SCAPER-213	ENST00000564757	OSBP2	Q969R2	916 aa		4.95	□□□□□ -1.62
SCAPER-213	ENST00000564757	MAGEB10	Q96LZ2	347 aa	Predicted RBP	4.95	□□□□□ -1.62
SCAPER-213	ENST00000564757	CLUHP3	Q96NS8	147 aa		4.95	□□□□□ -1.62
SCAPER-213	ENST00000564757	NKX2-4	Q9H2Z4	354 aa		4.95	□□□□□ -1.62
SCAPER-213	ENST00000564757	METTL14	Q9HCE5	456 aa	Known RBP	4.95	□□□□□ -1.62
SCAPER-213	ENST00000564757	PRR13	Q9NZ81	148 aa		4.95	□□□□□ -1.62
SCAPER-213	ENST00000564757	MAGEC2	Q9UBF1	373 aa	Predicted RBP	4.95	□□□□□ -1.62
SCAPER-213	ENST00000564757		A0A1W2PQ27	194 aa		4.94	□□□□□ -1.62
SCAPER-213	ENST00000564757		A0A1W2PQ64	194 aa		4.94	□□□□□ -1.62
SCAPER-213	ENST00000564757		A0A1W2PQC6	194 aa		4.94	□□□□□ -1.62
SCAPER-213	ENST00000564757		A0A1W2PQD8	194 aa		4.94	□□□□□ -1.62
SCAPER-213	ENST00000564757	SH3D21	A4FU49	640 aa		4.94	□□□□□ -1.62
SCAPER-213	ENST00000564757	FSHB	P01225	129 aa		4.94	□□□□□ -1.62
SCAPER-213	ENST00000564757	ITGB3	P05106	788 aa		4.94	□□□□□ -1.62
SCAPER-213	ENST00000564757	DBH	P09172	617 aa		4.94	□□□□□ -1.62
SCAPER-213	ENST00000564757	CPE	P16870	476 aa		4.94	□□□□□ -1.62
SCAPER-213	ENST00000564757	STAT3	P40763	770 aa		4.94	□□□□□ -1.62
SCAPER-213	ENST00000564757	SEPHS1	P49903	392 aa		4.94	□□□□□ -1.62
SCAPER-213	ENST00000564757	GFRA1	P56159	465 aa		4.94	□□□□□ -1.62
SCAPER-213	ENST00000564757	SCRN1	Q12765	414 aa		4.94	□□□□□ -1.62
SCAPER-213	ENST00000564757	MAP4K2	Q12851	820 aa		4.94	□□□□□ -1.62
SCAPER-213	ENST00000564757	CRTC3	Q6UUV7	619 aa		4.94	□□□□□ -1.62
SCAPER-213	ENST00000564757	BRAP	Q7Z569	592 aa		4.94	□□□□□ -1.62
SCAPER-213	ENST00000564757	MTDH	Q86UE4	582 aa	Known RBP	4.94	□□□□□ -1.62
SCAPER-213	ENST00000564757	AHI1	Q8N157	1196 aa		4.94	□□□□□ -1.62
SCAPER-213	ENST00000564757	TMEM145	Q8NBT3	493 aa		4.94	□□□□□ -1.62
SCAPER-213	ENST00000564757	LEO1	Q8WVC0	666 aa	Predicted RBP	4.94	□□□□□ -1.62
SCAPER-213	ENST00000564757	KRTAP3-1	Q9BYR8	98 aa		4.94	□□□□□ -1.62
SCAPER-213	ENST00000564757	CYP26B1	Q9NR63	512 aa		4.94	□□□□□ -1.62
SCAPER-213	ENST00000564757	HOMER2	Q9NSB8	354 aa		4.94	□□□□□ -1.62
SCAPER-213	ENST00000564757	FAN1	Q9Y2M0	1017 aa		4.94	□□□□□ -1.62
SCAPER-213	ENST00000564757	OVOL3	O00110	214 aa		4.93	□□□□□ -1.62
SCAPER-213	ENST00000564757	SRGAP3	O43295	1099 aa		4.93	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms