RNA–Protein interactions for RNA: ENST00000564678.1

HERPUD1-209, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 2,199 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-209ENST00000564678 RAB34Q9BZG1 259 aa8.14□□□□□ -1.11
HERPUD1-209ENST00000564678 CPVLQ9H3G5 476 aa8.14□□□□□ -1.11
HERPUD1-209ENST00000564678 DBNDD1Q9H9R9 158 aa8.14□□□□□ -1.11
HERPUD1-209ENST00000564678 RIC8AQ9NPQ8 531 aa8.14□□□□□ -1.11
HERPUD1-209ENST00000564678 MAGEC2Q9UBF1 373 aaPredicted RBP8.14□□□□□ -1.11
HERPUD1-209ENST00000564678 GOLGA6L9A6NEM1 432 aa8.13□□□□□ -1.11
HERPUD1-209ENST00000564678 USP27XA6NNY8 438 aa8.13□□□□□ -1.11
HERPUD1-209ENST00000564678 TMEM232C9JQI7 657 aa8.13□□□□□ -1.11
HERPUD1-209ENST00000564678 ZBTB5O15062 677 aa8.13□□□□□ -1.11
HERPUD1-209ENST00000564678 ZSCAN12O43309 604 aa8.13□□□□□ -1.11
HERPUD1-209ENST00000564678 ECE2O60344 883 aa8.13□□□□□ -1.11
HERPUD1-209ENST00000564678 CASP1P29466 404 aa8.13□□□□□ -1.11
HERPUD1-209ENST00000564678 ZNF76P36508 570 aa8.13□□□□□ -1.11
HERPUD1-209ENST00000564678 PBX1P40424 430 aa8.13□□□□□ -1.11
HERPUD1-209ENST00000564678 FXR2P51116 673 aaKnown RBP eCLIP8.13□□□□□ -1.11
HERPUD1-209ENST00000564678 MCTP2Q6DN12 878 aa8.13□□□□□ -1.11
HERPUD1-209ENST00000564678 KLHL10Q6JEL2 608 aa8.13□□□□□ -1.11
HERPUD1-209ENST00000564678 TATDN1Q6P1N9 297 aa8.13□□□□□ -1.11
HERPUD1-209ENST00000564678 CABP7Q86V35 215 aa8.13□□□□□ -1.11
HERPUD1-209ENST00000564678 MCF2L2Q86YR7 1114 aa8.13□□□□□ -1.11
HERPUD1-209ENST00000564678 ADGRF4Q8IZF3 695 aa8.13□□□□□ -1.11
HERPUD1-209ENST00000564678 LRRC47Q8N1G4 583 aaKnown RBP8.13□□□□□ -1.11
HERPUD1-209ENST00000564678 RDH13Q8NBN7 331 aa8.13□□□□□ -1.11
HERPUD1-209ENST00000564678 RASSF8Q8NHQ8 419 aa8.13□□□□□ -1.11
HERPUD1-209ENST00000564678 DCAF4Q8WV16 495 aa8.13□□□□□ -1.11
HERPUD1-209ENST00000564678 STAMQ92783 540 aa8.13□□□□□ -1.11
HERPUD1-209ENST00000564678 MTMR9Q96QG7 549 aa8.13□□□□□ -1.11
HERPUD1-209ENST00000564678 MXD3Q9BW11 206 aa8.13□□□□□ -1.11
HERPUD1-209ENST00000564678 NAA15Q9BXJ9 866 aaKnown RBP8.13□□□□□ -1.11
HERPUD1-209ENST00000564678 BLZF1Q9H2G9 400 aa8.13□□□□□ -1.11
HERPUD1-209ENST00000564678 JMJD4Q9H9V9 463 aa8.13□□□□□ -1.11
HERPUD1-209ENST00000564678 TRMT1Q9NXH9 659 aaKnown RBP8.13□□□□□ -1.11
HERPUD1-209ENST00000564678 LIMA1Q9UHB6 759 aaKnown RBP8.13□□□□□ -1.11
HERPUD1-209ENST00000564678 ITIH6Q6UXX5 1313 aa8.13□□□□□ -1.11
HERPUD1-209ENST00000564678 ENTPD3O75355 529 aa8.12□□□□□ -1.11
HERPUD1-209ENST00000564678 DKK1O94907 266 aa8.12□□□□□ -1.11
HERPUD1-209ENST00000564678 PAX3P23760 479 aa8.12□□□□□ -1.11
HERPUD1-209ENST00000564678 CDC25AP30304 524 aa8.12□□□□□ -1.11
HERPUD1-209ENST00000564678 NFIAQ12857 509 aa8.12□□□□□ -1.11
HERPUD1-209ENST00000564678 SLC15A2Q16348 729 aa8.12□□□□□ -1.11
HERPUD1-209ENST00000564678 CERKLQ49MI3 558 aaPredicted RBP8.12□□□□□ -1.11
HERPUD1-209ENST00000564678 COBLL1Q53SF7 1204 aa8.12□□□□□ -1.11
HERPUD1-209ENST00000564678 RNF187Q5TA31 235 aaPredicted RBP8.12□□□□□ -1.11
HERPUD1-209ENST00000564678 KIAA0825Q8IV33 1275 aa8.12□□□□□ -1.11
HERPUD1-209ENST00000564678 ADSSL1Q8N142 457 aa8.12□□□□□ -1.11
HERPUD1-209ENST00000564678 TC2NQ8N9U0 490 aa8.12□□□□□ -1.11
HERPUD1-209ENST00000564678 CALML4Q96GE6 196 aa8.12□□□□□ -1.11
HERPUD1-209ENST00000564678 PPP1R13BQ96KQ4 1090 aa8.12□□□□□ -1.11
HERPUD1-209ENST00000564678 PANX2Q96RD6 677 aa8.12□□□□□ -1.11
HERPUD1-209ENST00000564678 BAG1Q99933 345 aaPredicted RBP8.12□□□□□ -1.11
HERPUD1-209ENST00000564678 C7orf25Q9BPX7 421 aa8.12□□□□□ -1.11
HERPUD1-209ENST00000564678 SYNPO2Q9UMS6 1093 aa8.12□□□□□ -1.11
HERPUD1-209ENST00000564678 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.12□□□□□ -1.11
HERPUD1-209ENST00000564678 FRMPD2Q68DX3 1309 aaPredicted RBP8.12□□□□□ -1.11
HERPUD1-209ENST00000564678 MYH4Q9Y623 1939 aa8.12□□□□□ -1.11
HERPUD1-209ENST00000564678 AKR1B15C9JRZ8 316 aaPredicted RBP8.12□□□□□ -1.11
HERPUD1-209ENST00000564678 MPHOSPH10O00566 681 aaKnown RBP8.12□□□□□ -1.11
HERPUD1-209ENST00000564678 KLRC4O43908 158 aa8.12□□□□□ -1.11
HERPUD1-209ENST00000564678 GCFC2P16383 781 aaKnown RBP8.12□□□□□ -1.11
HERPUD1-209ENST00000564678 PRCPP42785 496 aa8.12□□□□□ -1.11
HERPUD1-209ENST00000564678 STX17P56962 302 aa8.12□□□□□ -1.11
HERPUD1-209ENST00000564678 TMEM266Q2M3C6 531 aa8.12□□□□□ -1.11
HERPUD1-209ENST00000564678 JAKMIP3Q5VZ66 844 aa8.12□□□□□ -1.11
HERPUD1-209ENST00000564678 TMEM179Q6ZVK1 233 aa8.12□□□□□ -1.11
HERPUD1-209ENST00000564678 RASGRP2Q7LDG7 609 aa8.12□□□□□ -1.11
HERPUD1-209ENST00000564678 TMEM139Q8IV31 216 aa8.12□□□□□ -1.11
HERPUD1-209ENST00000564678 GIMAP8Q8ND71 665 aaPredicted RBP8.12□□□□□ -1.11
HERPUD1-209ENST00000564678 NOC3LQ8WTT2 800 aaKnown RBP8.12□□□□□ -1.11
HERPUD1-209ENST00000564678 NELFBQ8WX92 580 aa8.12□□□□□ -1.11
HERPUD1-209ENST00000564678 CUL5Q93034 780 aa8.12□□□□□ -1.11
HERPUD1-209ENST00000564678 COA7Q96BR5 231 aa8.12□□□□□ -1.11
HERPUD1-209ENST00000564678 CCDC51Q96ER9 411 aa8.12□□□□□ -1.11
HERPUD1-209ENST00000564678 DHTKD1Q96HY7 919 aaPredicted RBP8.12□□□□□ -1.11
HERPUD1-209ENST00000564678 PURBQ96QR8 312 aaKnown RBP8.12□□□□□ -1.11
HERPUD1-209ENST00000564678 LRRC27Q9C0I9 530 aa8.12□□□□□ -1.11
HERPUD1-209ENST00000564678 STK17AQ9UEE5 414 aa8.12□□□□□ -1.11
HERPUD1-209ENST00000564678 COL2A1P02458 1487 aaPredicted RBP8.12□□□□□ -1.11
HERPUD1-209ENST00000564678 SLX4Q8IY92 1834 aa8.12□□□□□ -1.11
HERPUD1-209ENST00000564678 PSMA7O14818 248 aa8.11□□□□□ -1.11
HERPUD1-209ENST00000564678 SLC26A4O43511 780 aa8.11□□□□□ -1.11
HERPUD1-209ENST00000564678 TPM1P09493 284 aa8.11□□□□□ -1.11
HERPUD1-209ENST00000564678 RBM5P52756 815 aaKnown RBP eCLIP8.11□□□□□ -1.11
HERPUD1-209ENST00000564678 EIF6P56537 245 aaKnown RBP8.11□□□□□ -1.11
HERPUD1-209ENST00000564678 ETF1P62495 437 aaKnown RBP8.11□□□□□ -1.11
HERPUD1-209ENST00000564678 RACK1P63244 317 aaKnown RBP8.11□□□□□ -1.11
HERPUD1-209ENST00000564678 TRIM14Q14142 442 aa8.11□□□□□ -1.11
HERPUD1-209ENST00000564678 CALCRLQ16602 461 aa8.11□□□□□ -1.11
HERPUD1-209ENST00000564678 KMT5BQ4FZB7 885 aa8.11□□□□□ -1.11
HERPUD1-209ENST00000564678 HSP90AA4PQ58FG1 418 aa8.11□□□□□ -1.11
HERPUD1-209ENST00000564678 TCP11X2Q5H9J9 407 aa8.11□□□□□ -1.11
HERPUD1-209ENST00000564678 MSL1Q68DK7 614 aa8.11□□□□□ -1.11
HERPUD1-209ENST00000564678 PPFIBP1Q86W92 1011 aa8.11□□□□□ -1.11
HERPUD1-209ENST00000564678 SMYD4Q8IYR2 804 aaPredicted RBP8.11□□□□□ -1.11
HERPUD1-209ENST00000564678 TRIM9Q9C026 710 aa8.11□□□□□ -1.11
HERPUD1-209ENST00000564678 DNAJC18Q9H819 358 aa8.11□□□□□ -1.11
HERPUD1-209ENST00000564678 KCNQ5Q9NR82 932 aa8.11□□□□□ -1.11
HERPUD1-209ENST00000564678 VTI1BQ9UEU0 232 aa8.11□□□□□ -1.11
HERPUD1-209ENST00000564678 CTNND2Q9UQB3 1225 aa8.11□□□□□ -1.11
HERPUD1-209ENST00000564678 ATRNL1Q5VV63 1379 aa8.11□□□□□ -1.11
HERPUD1-209ENST00000564678 DDTLA6NHG4 134 aaPredicted RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms