RNA–Protein interactions for RNA: ENST00000564557.1

CNOT1-206, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-206ENST00000564557 PCDHA6Q9UN73 950 aa15.67■□□□□ 0.1
CNOT1-206ENST00000564557 PCDHA8Q9Y5H6 950 aa15.67■□□□□ 0.1
CNOT1-206ENST00000564557 GGPS1O95749 300 aa15.66■□□□□ 0.1
CNOT1-206ENST00000564557 FOSP01100 380 aaPredicted RBP15.66■□□□□ 0.1
CNOT1-206ENST00000564557 CDK7P50613 346 aa15.66■□□□□ 0.1
CNOT1-206ENST00000564557 EVCP57679 992 aa15.66■□□□□ 0.1
CNOT1-206ENST00000564557 PSMC6P62333 389 aa15.66■□□□□ 0.1
CNOT1-206ENST00000564557 ARHGAP1Q07960 439 aa15.66■□□□□ 0.1
CNOT1-206ENST00000564557 FAAP100Q0VG06 881 aa15.66■□□□□ 0.1
CNOT1-206ENST00000564557 STK3Q13188 491 aa15.66■□□□□ 0.1
CNOT1-206ENST00000564557 TOB2Q14106 344 aaPredicted RBP15.66■□□□□ 0.1
CNOT1-206ENST00000564557 NEDD9Q14511 834 aa15.66■□□□□ 0.1
CNOT1-206ENST00000564557 PFKFB3Q16875 520 aaPredicted RBP15.66■□□□□ 0.1
CNOT1-206ENST00000564557 SH3RF1Q7Z6J0 888 aa15.66■□□□□ 0.1
CNOT1-206ENST00000564557 PHKBQ93100 1093 aa15.66■□□□□ 0.1
CNOT1-206ENST00000564557 SPATA33Q96N06 139 aa15.66■□□□□ 0.1
CNOT1-206ENST00000564557 LARP6Q9BRS8 491 aaKnown RBP15.66■□□□□ 0.1
CNOT1-206ENST00000564557 C6orf50Q9HD87 102 aa15.66■□□□□ 0.1
CNOT1-206ENST00000564557 TRIM43BA6NCK2 446 aa15.65■□□□□ 0.1
CNOT1-206ENST00000564557 STXBP3O00186 592 aa15.65■□□□□ 0.1
CNOT1-206ENST00000564557 NOP56O00567 594 aaKnown RBP15.65■□□□□ 0.1
CNOT1-206ENST00000564557 KIAA0355O15063 1070 aa15.65■□□□□ 0.1
CNOT1-206ENST00000564557 FIBPO43427 364 aa15.65■□□□□ 0.1
CNOT1-206ENST00000564557 SORBS3O60504 671 aa15.65■□□□□ 0.1
CNOT1-206ENST00000564557 MMP3P08254 477 aa15.65■□□□□ 0.1
CNOT1-206ENST00000564557 SUPT20HL2P0C7V6 817 aa15.65■□□□□ 0.1
CNOT1-206ENST00000564557 IFNAR1P17181 557 aa15.65■□□□□ 0.1
CNOT1-206ENST00000564557 GNA11P29992 359 aa15.65■□□□□ 0.1
CNOT1-206ENST00000564557 SSRP1Q08945 709 aaKnown RBP15.65■□□□□ 0.1
CNOT1-206ENST00000564557 CCDC148Q8NFR7 591 aa15.65■□□□□ 0.1
CNOT1-206ENST00000564557 BADQ92934 168 aa15.65■□□□□ 0.1
CNOT1-206ENST00000564557 TRIM43Q96BQ3 446 aaPredicted RBP15.65■□□□□ 0.1
CNOT1-206ENST00000564557 CDHR1Q96JP9 859 aa15.65■□□□□ 0.1
CNOT1-206ENST00000564557 RNF26Q9BY78 433 aaPredicted RBP15.65■□□□□ 0.1
CNOT1-206ENST00000564557 SLKQ9H2G2 1235 aaPredicted RBP15.65■□□□□ 0.1
CNOT1-206ENST00000564557 NCOA5Q9HCD5 579 aaKnown RBP15.65■□□□□ 0.1
CNOT1-206ENST00000564557 FRMPD4Q14CM0 1322 aa15.65■□□□□ 0.1
CNOT1-206ENST00000564557 NID2Q14112 1375 aa15.64■□□□□ 0.09
CNOT1-206ENST00000564557 CDKL5O76039 1030 aa15.64■□□□□ 0.09
CNOT1-206ENST00000564557 RGS20O76081 388 aa15.64■□□□□ 0.09
CNOT1-206ENST00000564557 ZNF76P36508 570 aa15.64■□□□□ 0.09
CNOT1-206ENST00000564557 MRPS9P82933 396 aaKnown RBP15.64■□□□□ 0.09
CNOT1-206ENST00000564557 CELF3Q5SZQ8 465 aaKnown RBP15.64■□□□□ 0.09
CNOT1-206ENST00000564557 MYSM1Q5VVJ2 828 aa15.64■□□□□ 0.09
CNOT1-206ENST00000564557 MCTP2Q6DN12 878 aa15.64■□□□□ 0.09
CNOT1-206ENST00000564557 FAM126BQ8IXS8 530 aa15.64■□□□□ 0.09
CNOT1-206ENST00000564557 TDHQ8IZJ6 230 aa15.64■□□□□ 0.09
CNOT1-206ENST00000564557 SLC43A3Q8NBI5 491 aa15.64■□□□□ 0.09
CNOT1-206ENST00000564557 GIMAP8Q8ND71 665 aaPredicted RBP15.64■□□□□ 0.09
CNOT1-206ENST00000564557 PPTC7Q8NI37 304 aa15.64■□□□□ 0.09
CNOT1-206ENST00000564557 EMID1Q96A84 441 aaPredicted RBP15.64■□□□□ 0.09
CNOT1-206ENST00000564557 INPP4AQ96PE3 977 aaPredicted RBP15.64■□□□□ 0.09
CNOT1-206ENST00000564557 KATNAL1Q9BW62 490 aa15.64■□□□□ 0.09
CNOT1-206ENST00000564557 NOD1Q9Y239 953 aa15.64■□□□□ 0.09
CNOT1-206ENST00000564557 SPATA31C2B4DYI2 1134 aa15.63■□□□□ 0.09
CNOT1-206ENST00000564557 PPFIA3O75145 1194 aa15.63■□□□□ 0.09
CNOT1-206ENST00000564557 PPFIA4O75335 1185 aa15.63■□□□□ 0.09
CNOT1-206ENST00000564557 UBA1P22314 1058 aaKnown RBP15.63■□□□□ 0.09
CNOT1-206ENST00000564557 ICAM3P32942 547 aa15.63■□□□□ 0.09
CNOT1-206ENST00000564557 AP3B2Q13367 1082 aa15.63■□□□□ 0.09
CNOT1-206ENST00000564557 NBPF20Q3BBV1 942 aa15.63■□□□□ 0.09
CNOT1-206ENST00000564557 TYW1BQ6NUM6 668 aa15.63■□□□□ 0.09
CNOT1-206ENST00000564557 BICD2Q8TD16 824 aa15.63■□□□□ 0.09
CNOT1-206ENST00000564557 TSPYL2Q9H2G4 693 aaPredicted RBP15.63■□□□□ 0.09
CNOT1-206ENST00000564557 PRO3102Q9H379 93 aa15.63■□□□□ 0.09
CNOT1-206ENST00000564557 MYH7BA7E2Y1 1941 aa15.62■□□□□ 0.09
CNOT1-206ENST00000564557 MAFGO15525 162 aa15.62■□□□□ 0.09
CNOT1-206ENST00000564557 TIMP1P01033 207 aa15.62■□□□□ 0.09
CNOT1-206ENST00000564557 FPGSQ05932 587 aa15.62■□□□□ 0.09
CNOT1-206ENST00000564557 PTPN11Q06124 597 aaPredicted RBP15.62■□□□□ 0.09
CNOT1-206ENST00000564557 MTMR1Q13613 665 aa15.62■□□□□ 0.09
CNOT1-206ENST00000564557 NTRK3Q16288 839 aa15.62■□□□□ 0.09
CNOT1-206ENST00000564557 JAKMIP3Q5VZ66 844 aa15.62■□□□□ 0.09
CNOT1-206ENST00000564557 NFRKBQ6P4R8 1299 aa15.62■□□□□ 0.09
CNOT1-206ENST00000564557 CYFIP1Q7L576 1253 aa15.62■□□□□ 0.09
CNOT1-206ENST00000564557 TMEM199Q8N511 208 aa15.62■□□□□ 0.09
CNOT1-206ENST00000564557 C7orf31Q8N865 590 aa15.62■□□□□ 0.09
CNOT1-206ENST00000564557 GPRASP2Q96D09 838 aa15.62■□□□□ 0.09
CNOT1-206ENST00000564557 ANO3Q9BYT9 981 aa15.62■□□□□ 0.09
CNOT1-206ENST00000564557 PPP1R12CQ9BZL4 782 aa15.62■□□□□ 0.09
CNOT1-206ENST00000564557 ALDH8A1Q9H2A2 487 aaPredicted RBP15.62■□□□□ 0.09
CNOT1-206ENST00000564557 PCDH10Q9P2E7 1040 aa15.62■□□□□ 0.09
CNOT1-206ENST00000564557 GRIN2DO15399 1336 aa15.62■□□□□ 0.09
CNOT1-206ENST00000564557 ESYT2A0FGR8 921 aa15.61■□□□□ 0.09
CNOT1-206ENST00000564557 B4GALT4O60513 344 aa15.61■□□□□ 0.09
CNOT1-206ENST00000564557 DEXIO95424 95 aa15.61■□□□□ 0.09
CNOT1-206ENST00000564557 SEC24BO95487 1268 aa15.61■□□□□ 0.09
CNOT1-206ENST00000564557 CD4P01730 458 aa15.61■□□□□ 0.09
CNOT1-206ENST00000564557 NEK4P51957 841 aa15.61■□□□□ 0.09
CNOT1-206ENST00000564557 NLRP5P59047 1200 aa15.61■□□□□ 0.09
CNOT1-206ENST00000564557 SP2Q02086 613 aa15.61■□□□□ 0.09
CNOT1-206ENST00000564557 PKN1Q16512 942 aa15.61■□□□□ 0.09
CNOT1-206ENST00000564557 HSDL1Q3SXM5 330 aa15.61■□□□□ 0.09
CNOT1-206ENST00000564557 METTL7BQ6UX53 244 aa15.61■□□□□ 0.09
CNOT1-206ENST00000564557 REXO1Q8N1G1 1221 aaKnown RBP15.61■□□□□ 0.09
CNOT1-206ENST00000564557 ZNF579Q8NAF0 562 aaKnown RBP15.61■□□□□ 0.09
CNOT1-206ENST00000564557 PGBD1Q96JS3 809 aa15.61■□□□□ 0.09
CNOT1-206ENST00000564557 SENP7Q9BQF6 1050 aa15.61■□□□□ 0.09
CNOT1-206ENST00000564557 ALG1Q9BT22 464 aa15.61■□□□□ 0.09
CNOT1-206ENST00000564557 ZMYND12Q9H0C1 365 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms