RNA–Protein interactions for RNA: ENST00000564288.5

MACF1-231, Transcript of microtubule-actin crosslinking factor 1, human

APPRIS ALT2 TSL 5 BASIC

Gene MACF1, Length 24,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-231	ENST00000564288		V9GY48	417 aa	Predicted RBP	4.61	□□□□□ -1.67
MACF1-231	ENST00000564288	RASSF9	O75901	435 aa		4.61	□□□□□ -1.67
MACF1-231	ENST00000564288	RTN1	Q16799	776 aa		4.61	□□□□□ -1.67
MACF1-231	ENST00000564288	PIK3R5	Q8WYR1	880 aa		4.61	□□□□□ -1.67
MACF1-231	ENST00000564288	MYO5C	Q9NQX4	1742 aa		4.61	□□□□□ -1.67
MACF1-231	ENST00000564288	CCDC189	A1A4V9	331 aa		4.61	□□□□□ -1.67
MACF1-231	ENST00000564288	MGRN1	O60291	552 aa		4.61	□□□□□ -1.67
MACF1-231	ENST00000564288	TUBGCP2	Q9BSJ2	902 aa		4.61	□□□□□ -1.67
MACF1-231	ENST00000564288	MAN1B1	Q9UKM7	699 aa		4.61	□□□□□ -1.67
MACF1-231	ENST00000564288	GMEB1	Q9Y692	573 aa		4.61	□□□□□ -1.67
MACF1-231	ENST00000564288	KDR	P35968	1356 aa		4.61	□□□□□ -1.67
MACF1-231	ENST00000564288	ZWILCH	Q9H900	591 aa		4.61	□□□□□ -1.67
MACF1-231	ENST00000564288	TUBE1	Q9UJT0	475 aa		4.61	□□□□□ -1.67
MACF1-231	ENST00000564288	CARD8	Q9Y2G2	431 aa		4.61	□□□□□ -1.67
MACF1-231	ENST00000564288	SHOX2	O60902	331 aa	Predicted RBP	4.61	□□□□□ -1.67
MACF1-231	ENST00000564288	GGPS1	O95749	300 aa		4.61	□□□□□ -1.67
MACF1-231	ENST00000564288	PFKFB1	P16118	471 aa		4.61	□□□□□ -1.67
MACF1-231	ENST00000564288	AK8	Q96MA6	479 aa		4.61	□□□□□ -1.67
MACF1-231	ENST00000564288	PANK4	Q9NVE7	773 aa		4.61	□□□□□ -1.67
MACF1-231	ENST00000564288	KIF1B	O60333	1816 aa		4.61	□□□□□ -1.67
MACF1-231	ENST00000564288	PTPRE	P23469	700 aa		4.61	□□□□□ -1.67
MACF1-231	ENST00000564288	SNX29	Q8TEQ0	813 aa		4.61	□□□□□ -1.67
MACF1-231	ENST00000564288	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	4.61	□□□□□ -1.67	4e-6	■■■□□ 14.8
MACF1-231	ENST00000564288	SNRNP27	Q8WVK2	155 aa	Known RBP	4.61	□□□□□ -1.67
MACF1-231	ENST00000564288	RNPC3	Q96LT9	517 aa	Known RBP	4.61	□□□□□ -1.67
MACF1-231	ENST00000564288	CDC5L	Q99459	802 aa	Known RBP	4.61	□□□□□ -1.67
MACF1-231	ENST00000564288	AK5	Q9Y6K8	562 aa		4.61	□□□□□ -1.67
MACF1-231	ENST00000564288	RBM46	Q8TBY0	533 aa	Known RBP	4.61	□□□□□ -1.67
MACF1-231	ENST00000564288	MYCBPAP	Q8TBZ2	947 aa		4.61	□□□□□ -1.67
MACF1-231	ENST00000564288	RSPH1	Q8WYR4	309 aa		4.61	□□□□□ -1.67
MACF1-231	ENST00000564288	ALKBH8	Q96BT7	664 aa	Known RBP	4.61	□□□□□ -1.67
MACF1-231	ENST00000564288	RXFP1	Q9HBX9	757 aa		4.61	□□□□□ -1.67
MACF1-231	ENST00000564288	KCNK3	O14649	394 aa		4.61	□□□□□ -1.67
MACF1-231	ENST00000564288	SAP30BP	Q9UHR5	308 aa	Known RBP	4.61	□□□□□ -1.67
MACF1-231	ENST00000564288	ANKAR	Q7Z5J8	1434 aa		4.61	□□□□□ -1.67
MACF1-231	ENST00000564288	UQCRFS1P1	P0C7P4	283 aa		4.61	□□□□□ -1.67
MACF1-231	ENST00000564288	VSNL1	P62760	191 aa		4.61	□□□□□ -1.67
MACF1-231	ENST00000564288	DPCR1	Q3MIW9	517 aa		4.61	□□□□□ -1.67
MACF1-231	ENST00000564288	GSTA5	Q7RTV2	222 aa		4.61	□□□□□ -1.67
MACF1-231	ENST00000564288	ZNF444	Q8N0Y2	327 aa	Predicted RBP	4.61	□□□□□ -1.67
MACF1-231	ENST00000564288	PPP4R1	Q8TF05	950 aa		4.61	□□□□□ -1.67
MACF1-231	ENST00000564288	N4BP1	O75113	896 aa	Known RBP	4.61	□□□□□ -1.67
MACF1-231	ENST00000564288	NAA35	Q5VZE5	725 aa		4.61	□□□□□ -1.67
MACF1-231	ENST00000564288	ALLC	Q8N6M5	410 aa		4.61	□□□□□ -1.67
MACF1-231	ENST00000564288	CDHR2	Q9BYE9	1310 aa		4.61	□□□□□ -1.67
MACF1-231	ENST00000564288	COQ9	O75208	318 aa		4.61	□□□□□ -1.67
MACF1-231	ENST00000564288	BLMH	Q13867	455 aa		4.61	□□□□□ -1.67
MACF1-231	ENST00000564288	PLEKHF1	Q96S99	279 aa		4.61	□□□□□ -1.67
MACF1-231	ENST00000564288	FMO2	Q99518	471 aa		4.61	□□□□□ -1.67
MACF1-231	ENST00000564288	ASCC2	Q9H1I8	757 aa	Predicted RBP	4.61	□□□□□ -1.67
MACF1-231	ENST00000564288	GRM8	O00222	908 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	PPARG	P37231	505 aa	Predicted RBP	4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	STAT1	P42224	750 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	HSPA13	P48723	471 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	CCNH	P51946	323 aa	Predicted RBP	4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	SLC5A9	Q2M3M2	681 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	HAUS3	Q68CZ6	603 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	KRT40	Q6A162	431 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	TSPYL6	Q8N831	410 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	CNPY3	Q9BT09	278 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	USP27X	A6NNY8	438 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	ZNF12	P17014	697 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	XIAP	P98170	497 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	MMEL1	Q495T6	779 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	ATG16L1	Q676U5	607 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	GGT6	Q6P531	493 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	ESR2	Q92731	530 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	MXD3	Q9BW11	206 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	PASK	Q96RG2	1323 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	KRT8	P05787	483 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	SEC24C	P53992	1094 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	C11orf91	Q3C1V1	193 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	SASH3	O75995	380 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	HELB	Q8NG08	1087 aa	Predicted RBP	4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	KCNA4	P22459	653 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	OTUD7A	Q8TE49	926 aa	Predicted RBP	4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	CCDC127	Q96BQ5	260 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	KIFC3	Q9BVG8	833 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	ISCU	Q9H1K1	167 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	C15orf41	Q9Y2V0	281 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	SNAPC5	O75971	98 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	KRT15	P19012	456 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	KRT79	Q5XKE5	535 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	PRR23C	Q6ZRP0	262 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	NECTIN2	Q92692	538 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288		A8MXQ7	604 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	CES2	O00748	559 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	SYF2	O95926	243 aa	Known RBP	4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	SKIV2L2	P42285	1042 aa	Known RBP	4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	RPL5	P46777	297 aa	Known RBP	4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	RASSF7	Q02833	373 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	ZFR	Q96KR1	1074 aa	Known RBP	4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	ZC3H13	Q5T200	1668 aa	Known RBP	4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	ATP6V1G2	O95670	118 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	HDAC4	P56524	1084 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	MAP3K7CL	P57077	242 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	ASIC2	Q16515	512 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	PARP6	Q2NL67	630 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	LIN9	Q5TKA1	542 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	B3GNT6	Q6ZMB0	384 aa		4.6	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms