RNA–Protein interactions for RNA: ENST00000563963.1

TUBGCP4-207, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 2

Gene TUBGCP4, Length 4,379 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-207ENST00000563963 TTPALQ9BTX7 342 aa6.48□□□□□ -1.37
TUBGCP4-207ENST00000563963 EDEM3Q9BZQ6 932 aa6.48□□□□□ -1.37
TUBGCP4-207ENST00000563963 CLSTN2Q9H4D0 955 aa6.48□□□□□ -1.37
TUBGCP4-207ENST00000563963 ZNF215Q9UL58 517 aaPredicted RBP6.48□□□□□ -1.37
TUBGCP4-207ENST00000563963 NUP155O75694 1391 aa6.48□□□□□ -1.37
TUBGCP4-207ENST00000563963 ZW10O43264 779 aa6.48□□□□□ -1.37
TUBGCP4-207ENST00000563963 CBFA2T3O75081 653 aa6.48□□□□□ -1.37
TUBGCP4-207ENST00000563963 CLCN6P51797 869 aa6.48□□□□□ -1.37
TUBGCP4-207ENST00000563963 KLHL30Q0D2K2 578 aa6.48□□□□□ -1.37
TUBGCP4-207ENST00000563963 CAMK2BQ13554 666 aa6.48□□□□□ -1.37
TUBGCP4-207ENST00000563963 KIF22Q14807 665 aa6.48□□□□□ -1.37
TUBGCP4-207ENST00000563963 METTL11BQ5VVY1 283 aa6.48□□□□□ -1.37
TUBGCP4-207ENST00000563963 ANKLE2Q86XL3 938 aa6.48□□□□□ -1.37
TUBGCP4-207ENST00000563963 SCAIQ8N9R8 606 aa6.48□□□□□ -1.37
TUBGCP4-207ENST00000563963 KAT2BQ92831 832 aa6.48□□□□□ -1.37
TUBGCP4-207ENST00000563963 SELENOSQ9BQE4 189 aa6.48□□□□□ -1.37
TUBGCP4-207ENST00000563963 ARNT2Q9HBZ2 717 aa6.48□□□□□ -1.37
TUBGCP4-207ENST00000563963 ZMYND8Q9ULU4 1186 aaPredicted RBP6.48□□□□□ -1.37
TUBGCP4-207ENST00000563963 NKTRP30414 1462 aaKnown RBP6.47□□□□□ -1.37
TUBGCP4-207ENST00000563963 GPATCH8Q9UKJ3 1502 aaKnown RBP6.47□□□□□ -1.37
TUBGCP4-207ENST00000563963 ANKRD65E5RJM6 399 aa6.47□□□□□ -1.37
TUBGCP4-207ENST00000563963 ACSL4O60488 711 aa6.47□□□□□ -1.37
TUBGCP4-207ENST00000563963 MYZAPP0CAP1 466 aa6.47□□□□□ -1.37
TUBGCP4-207ENST00000563963 ALDH3A1P30838 453 aa6.47□□□□□ -1.37
TUBGCP4-207ENST00000563963 PTGS2P35354 604 aa6.47□□□□□ -1.37
TUBGCP4-207ENST00000563963 KRT20P35900 424 aa6.47□□□□□ -1.37
TUBGCP4-207ENST00000563963 SERPINB8P50452 374 aa6.47□□□□□ -1.37
TUBGCP4-207ENST00000563963 KPNA1P52294 538 aaPredicted RBP6.47□□□□□ -1.37
TUBGCP4-207ENST00000563963 CRY1Q16526 586 aa6.47□□□□□ -1.37
TUBGCP4-207ENST00000563963 TMEM95Q3KNT9 176 aa6.47□□□□□ -1.37
TUBGCP4-207ENST00000563963 PLEKHO1Q53GL0 409 aaPredicted RBP6.47□□□□□ -1.37
TUBGCP4-207ENST00000563963 CRTC1Q6UUV9 634 aa6.47□□□□□ -1.37
TUBGCP4-207ENST00000563963 RAPH1Q70E73 1250 aa6.47□□□□□ -1.37
TUBGCP4-207ENST00000563963 CAND1Q86VP6 1230 aaKnown RBP6.47□□□□□ -1.37
TUBGCP4-207ENST00000563963 FAM186BQ8IYM0 893 aa6.47□□□□□ -1.37
TUBGCP4-207ENST00000563963 CEP70Q8NHQ1 597 aa6.47□□□□□ -1.37
TUBGCP4-207ENST00000563963 GLT8D2Q9H1C3 349 aa6.47□□□□□ -1.37
TUBGCP4-207ENST00000563963 DDX21Q9NR30 783 aaKnown RBP eCLIP6.47□□□□□ -1.37
TUBGCP4-207ENST00000563963 DSEQ9UL01 958 aa6.47□□□□□ -1.37
TUBGCP4-207ENST00000563963 CD2APQ9Y5K6 639 aa6.47□□□□□ -1.37
TUBGCP4-207ENST00000563963 IFIT2P09913 472 aaKnown RBP6.47□□□□□ -1.37
TUBGCP4-207ENST00000563963 CD83Q01151 205 aa6.47□□□□□ -1.37
TUBGCP4-207ENST00000563963 GNA13Q14344 377 aa6.47□□□□□ -1.37
TUBGCP4-207ENST00000563963 TBC1D9Q6ZT07 1266 aa6.47□□□□□ -1.37
TUBGCP4-207ENST00000563963 STK32CQ86UX6 486 aa6.47□□□□□ -1.37
TUBGCP4-207ENST00000563963 CCDC63Q8NA47 563 aa6.47□□□□□ -1.37
TUBGCP4-207ENST00000563963 SLC22A8Q8TCC7 542 aa6.47□□□□□ -1.37
TUBGCP4-207ENST00000563963 WDR60Q8WVS4 1066 aa6.47□□□□□ -1.37
TUBGCP4-207ENST00000563963 SMC6Q96SB8 1091 aa6.47□□□□□ -1.37
TUBGCP4-207ENST00000563963 UPF3BQ9BZI7 483 aaKnown RBP6.47□□□□□ -1.37
TUBGCP4-207ENST00000563963 DNAJC18Q9H819 358 aa6.47□□□□□ -1.37
TUBGCP4-207ENST00000563963 PCDHGB3Q9Y5G1 929 aa6.47□□□□□ -1.37
TUBGCP4-207ENST00000563963 PRRT4C9JH25 899 aa6.47□□□□□ -1.37
TUBGCP4-207ENST00000563963 CYP27B1O15528 508 aa6.47□□□□□ -1.37
TUBGCP4-207ENST00000563963 AGR2O95994 175 aa6.47□□□□□ -1.37
TUBGCP4-207ENST00000563963 TUBB4AP04350 444 aa6.47□□□□□ -1.37
TUBGCP4-207ENST00000563963 RAC2P15153 192 aa6.47□□□□□ -1.37
TUBGCP4-207ENST00000563963 H2AFXP16104 143 aaPredicted RBP6.47□□□□□ -1.37
TUBGCP4-207ENST00000563963 HNF1BP35680 557 aa6.47□□□□□ -1.37
TUBGCP4-207ENST00000563963 STAT3P40763 770 aa6.47□□□□□ -1.37
TUBGCP4-207ENST00000563963 STIM1Q13586 685 aa6.47□□□□□ -1.37
TUBGCP4-207ENST00000563963 ANKDD1AQ495B1 522 aa6.47□□□□□ -1.37
TUBGCP4-207ENST00000563963 HABP4Q5JVS0 413 aaKnown RBP6.47□□□□□ -1.37
TUBGCP4-207ENST00000563963 PPP4R3AQ6IN85 833 aa6.47□□□□□ -1.37
TUBGCP4-207ENST00000563963 FAM20CQ8IXL6 584 aa6.47□□□□□ -1.37
TUBGCP4-207ENST00000563963 ZNF784Q8NCA9 323 aaPredicted RBP6.47□□□□□ -1.37
TUBGCP4-207ENST00000563963 CNDP2Q96KP4 475 aaKnown RBP6.47□□□□□ -1.37
TUBGCP4-207ENST00000563963 HAUS8Q9BT25 410 aa6.47□□□□□ -1.37
TUBGCP4-207ENST00000563963 VCXQ9H320 206 aa6.47□□□□□ -1.37
TUBGCP4-207ENST00000563963 LGR6Q9HBX8 967 aa6.47□□□□□ -1.37
TUBGCP4-207ENST00000563963 XAB2Q9HCS7 855 aaKnown RBP6.47□□□□□ -1.37
TUBGCP4-207ENST00000563963 PREBQ9HCU5 417 aa6.47□□□□□ -1.37
TUBGCP4-207ENST00000563963 STARD7Q9NQZ5 370 aa6.47□□□□□ -1.37
TUBGCP4-207ENST00000563963 ZNF277Q9NRM2 450 aaPredicted RBP6.47□□□□□ -1.37
TUBGCP4-207ENST00000563963 AFG3L2Q9Y4W6 797 aa6.47□□□□□ -1.37
TUBGCP4-207ENST00000563963 ARHGAP31Q2M1Z3 1444 aa6.47□□□□□ -1.37
TUBGCP4-207ENST00000563963 SLIT1O75093 1534 aa6.47□□□□□ -1.37
TUBGCP4-207ENST00000563963 DIP2AQ14689 1571 aa6.46□□□□□ -1.37
TUBGCP4-207ENST00000563963 UGGT1Q9NYU2 1555 aa6.46□□□□□ -1.37
TUBGCP4-207ENST00000563963 ZBTB43O43298 467 aa6.46□□□□□ -1.37
TUBGCP4-207ENST00000563963 IL32P24001 234 aa6.46□□□□□ -1.37
TUBGCP4-207ENST00000563963 INHBCP55103 352 aa6.46□□□□□ -1.37
TUBGCP4-207ENST00000563963 ZBTB16Q05516 673 aa6.46□□□□□ -1.37
TUBGCP4-207ENST00000563963 SLFN5Q08AF3 891 aa6.46□□□□□ -1.37
TUBGCP4-207ENST00000563963 NDUFA5Q16718 116 aa6.46□□□□□ -1.37
TUBGCP4-207ENST00000563963 ARHGAP29Q52LW3 1261 aa6.46□□□□□ -1.37
TUBGCP4-207ENST00000563963 RAVER1Q8IY67 606 aaKnown RBP6.46□□□□□ -1.37
TUBGCP4-207ENST00000563963 SLC16A10Q8TF71 515 aa6.46□□□□□ -1.37
TUBGCP4-207ENST00000563963 CCDC42Q96M95 316 aa6.46□□□□□ -1.37
TUBGCP4-207ENST00000563963 APOL5Q9BWW9 433 aa6.46□□□□□ -1.37
TUBGCP4-207ENST00000563963 HESX1Q9UBX0 185 aa6.46□□□□□ -1.37
TUBGCP4-207ENST00000563963 ADAMTS8Q9UP79 889 aa6.46□□□□□ -1.37
TUBGCP4-207ENST00000563963 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.46□□□□□ -1.38
TUBGCP4-207ENST00000563963 TOP1P11387 765 aaKnown RBP6.46□□□□□ -1.38
TUBGCP4-207ENST00000563963 GZMAP12544 262 aa6.46□□□□□ -1.38
TUBGCP4-207ENST00000563963 POLE2P56282 527 aa6.46□□□□□ -1.38
TUBGCP4-207ENST00000563963 GABREP78334 506 aa6.46□□□□□ -1.38
TUBGCP4-207ENST00000563963 SMYD5Q6GMV2 418 aa6.46□□□□□ -1.38
TUBGCP4-207ENST00000563963 RTL10Q7L3V2 364 aa6.46□□□□□ -1.38
TUBGCP4-207ENST00000563963 MAELQ96JY0 434 aaKnown RBP6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms