RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 DDX12PQ92771 950 aa13.03□□□□□ -0.32
ABCA3-203ENST00000563623 TRIM31Q9BZY9 425 aa13.03□□□□□ -0.32
ABCA3-203ENST00000563623 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.03□□□□□ -0.32
ABCA3-203ENST00000563623 ZNF804BA4D1E1 1349 aa13.03□□□□□ -0.32
ABCA3-203ENST00000563623 B4GALNT4Q76KP1 1039 aa13.02□□□□□ -0.32
ABCA3-203ENST00000563623 MYOCDQ8IZQ8 938 aa13.02□□□□□ -0.32
ABCA3-203ENST00000563623 TLR10Q9BXR5 811 aa13.02□□□□□ -0.32
ABCA3-203ENST00000563623 BCL9O00512 1426 aa13.02□□□□□ -0.32
ABCA3-203ENST00000563623 BACH1O14867 736 aa13.02□□□□□ -0.33
ABCA3-203ENST00000563623 PRPF4BQ13523 1007 aaKnown RBP13.02□□□□□ -0.33
ABCA3-203ENST00000563623 HERC4Q5GLZ8 1057 aaPredicted RBP13.02□□□□□ -0.33
ABCA3-203ENST00000563623 PDXDC1Q6P996 788 aa13.02□□□□□ -0.33
ABCA3-203ENST00000563623 UBLCP1Q8WVY7 318 aaPredicted RBP13.02□□□□□ -0.33
ABCA3-203ENST00000563623 MAGEF1Q9HAY2 307 aa13.02□□□□□ -0.33
ABCA3-203ENST00000563623 USP8P40818 1118 aa13.02□□□□□ -0.33
ABCA3-203ENST00000563623 IFT88Q13099 833 aa13.02□□□□□ -0.33
ABCA3-203ENST00000563623 TRADDQ15628 312 aa13.02□□□□□ -0.33
ABCA3-203ENST00000563623 GALNT17Q6IS24 598 aa13.02□□□□□ -0.33
ABCA3-203ENST00000563623 LRRC47Q8N1G4 583 aaKnown RBP13.02□□□□□ -0.33
ABCA3-203ENST00000563623 RNPC3Q96LT9 517 aaKnown RBP13.02□□□□□ -0.33
ABCA3-203ENST00000563623 SETDB2Q96T68 719 aa13.02□□□□□ -0.33
ABCA3-203ENST00000563623 NR1D1P20393 614 aa13.01□□□□□ -0.33
ABCA3-203ENST00000563623 TNNC1P63316 161 aa13.01□□□□□ -0.33
ABCA3-203ENST00000563623 PICALMQ13492 652 aa13.01□□□□□ -0.33
ABCA3-203ENST00000563623 UBE2SQ16763 222 aa13.01□□□□□ -0.33
ABCA3-203ENST00000563623 UNC13DQ70J99 1090 aa13.01□□□□□ -0.33
ABCA3-203ENST00000563623 FBXO33Q7Z6M2 555 aa13.01□□□□□ -0.33
ABCA3-203ENST00000563623 TEX11Q8IYF3 940 aa13.01□□□□□ -0.33
ABCA3-203ENST00000563623 AP1M1Q9BXS5 423 aa13.01□□□□□ -0.33
ABCA3-203ENST00000563623 ZC3H4Q9UPT8 1303 aaKnown RBP13.01□□□□□ -0.33
ABCA3-203ENST00000563623 MYH13Q9UKX3 1938 aa13.01□□□□□ -0.33
ABCA3-203ENST00000563623 KLRC1P26715 233 aa13.01□□□□□ -0.33
ABCA3-203ENST00000563623 MAP2K2P36507 400 aa13.01□□□□□ -0.33
ABCA3-203ENST00000563623 ASIC2Q16515 512 aa13.01□□□□□ -0.33
ABCA3-203ENST00000563623 SLC35G1Q2M3R5 365 aa13.01□□□□□ -0.33
ABCA3-203ENST00000563623 FAM83BQ5T0W9 1011 aa13.01□□□□□ -0.33
ABCA3-203ENST00000563623 MICALCLQ6ZW33 695 aa13.01□□□□□ -0.33
ABCA3-203ENST00000563623 OR2W6PQ8NHA6 318 aa13.01□□□□□ -0.33
ABCA3-203ENST00000563623 A0A1W2PQJ5 194 aa13.01□□□□□ -0.33
ABCA3-203ENST00000563623 PRPHP41219 470 aa13.01□□□□□ -0.33
ABCA3-203ENST00000563623 GRB10Q13322 594 aa13.01□□□□□ -0.33
ABCA3-203ENST00000563623 RPS6KA1Q15418 735 aa13.01□□□□□ -0.33
ABCA3-203ENST00000563623 FAM26FQ5R3K3 315 aa13.01□□□□□ -0.33
ABCA3-203ENST00000563623 KLHDC7AQ5VTJ3 777 aa13.01□□□□□ -0.33
ABCA3-203ENST00000563623 NUDT12Q9BQG2 462 aa13.01□□□□□ -0.33
ABCA3-203ENST00000563623 CXorf56Q9H5V9 222 aa13.01□□□□□ -0.33
ABCA3-203ENST00000563623 ZNF287Q9HBT7 754 aa13.01□□□□□ -0.33
ABCA3-203ENST00000563623 SEPT11Q9NVA2 429 aaKnown RBP13.01□□□□□ -0.33
ABCA3-203ENST00000563623 PANK4Q9NVE7 773 aa13.01□□□□□ -0.33
ABCA3-203ENST00000563623 SRP68Q9UHB9 627 aaKnown RBP13.01□□□□□ -0.33
ABCA3-203ENST00000563623 SUFUQ9UMX1 484 aa13.01□□□□□ -0.33
ABCA3-203ENST00000563623 SIK3Q9Y2K2 1263 aa13.01□□□□□ -0.33
ABCA3-203ENST00000563623 COL1A1P02452 1464 aaPredicted RBP13□□□□□ -0.33
ABCA3-203ENST00000563623 USP17L5A8MUK1 530 aa13□□□□□ -0.33
ABCA3-203ENST00000563623 MYO1FO00160 1098 aa13□□□□□ -0.33
ABCA3-203ENST00000563623 RDXP35241 583 aaKnown RBP13□□□□□ -0.33
ABCA3-203ENST00000563623 DCAF17Q5H9S7 520 aaPredicted RBP13□□□□□ -0.33
ABCA3-203ENST00000563623 CENPPQ6IPU0 288 aa13□□□□□ -0.33
ABCA3-203ENST00000563623 FAM43BQ6ZT52 329 aaPredicted RBP13□□□□□ -0.33
ABCA3-203ENST00000563623 DDX42Q86XP3 938 aaKnown RBP eCLIP13□□□□□ -0.33
ABCA3-203ENST00000563623 PACSIN1Q9BY11 444 aa13□□□□□ -0.33
ABCA3-203ENST00000563623 PLAAQ9Y263 795 aa13□□□□□ -0.33
ABCA3-203ENST00000563623 COL4A3BPQ9Y5P4 624 aa13□□□□□ -0.33
ABCA3-203ENST00000563623 FLT1P17948 1338 aa13□□□□□ -0.33
ABCA3-203ENST00000563623 KCNQ2O43526 872 aa13□□□□□ -0.33
ABCA3-203ENST00000563623 FGRP09769 529 aa13□□□□□ -0.33
ABCA3-203ENST00000563623 ADCY7P51828 1080 aa13□□□□□ -0.33
ABCA3-203ENST00000563623 SBK1Q52WX2 424 aa13□□□□□ -0.33
ABCA3-203ENST00000563623 PURBQ96QR8 312 aaKnown RBP13□□□□□ -0.33
ABCA3-203ENST00000563623 ANKRD2Q9GZV1 360 aa13□□□□□ -0.33
ABCA3-203ENST00000563623 GOPCQ9HD26 462 aa13□□□□□ -0.33
ABCA3-203ENST00000563623 GOLGA6L7A0A1B0GV03 622 aa13□□□□□ -0.33
ABCA3-203ENST00000563623 F8W031 263 aaPredicted RBP13□□□□□ -0.33
ABCA3-203ENST00000563623 MPHOSPH10O00566 681 aaKnown RBP13□□□□□ -0.33
ABCA3-203ENST00000563623 LRCH2Q5VUJ6 765 aa13□□□□□ -0.33
ABCA3-203ENST00000563623 NAA35Q5VZE5 725 aa13□□□□□ -0.33
ABCA3-203ENST00000563623 ADAT2Q7Z6V5 191 aaKnown RBP13□□□□□ -0.33
ABCA3-203ENST00000563623 CLEC10AQ8IUN9 316 aa13□□□□□ -0.33
ABCA3-203ENST00000563623 PARP4Q9UKK3 1724 aaKnown RBP13□□□□□ -0.33
ABCA3-203ENST00000563623 SMIM23A6NLE4 172 aa12.99□□□□□ -0.33
ABCA3-203ENST00000563623 SLC37A4O43826 429 aa12.99□□□□□ -0.33
ABCA3-203ENST00000563623 FKBP3Q00688 224 aaKnown RBP12.99□□□□□ -0.33
ABCA3-203ENST00000563623 IFFO1Q0D2I5 559 aa12.99□□□□□ -0.33
ABCA3-203ENST00000563623 FIGNQ5HY92 759 aa12.99□□□□□ -0.33
ABCA3-203ENST00000563623 TBC1D9BQ66K14 1250 aa12.99□□□□□ -0.33
ABCA3-203ENST00000563623 GUF1Q8N442 669 aaKnown RBP12.99□□□□□ -0.33
ABCA3-203ENST00000563623 MMTAG2Q9BU76 263 aaKnown RBP12.99□□□□□ -0.33
ABCA3-203ENST00000563623 TSKSQ9UJT2 592 aa12.99□□□□□ -0.33
ABCA3-203ENST00000563623 NPHP3-ACAD11A0A0J9YXS1 232 aa12.99□□□□□ -0.33
ABCA3-203ENST00000563623 LDHCP07864 332 aa12.99□□□□□ -0.33
ABCA3-203ENST00000563623 HNRNPH1P31943 449 aaKnown RBP12.99□□□□□ -0.33
ABCA3-203ENST00000563623 CDK8P49336 464 aa12.99□□□□□ -0.33
ABCA3-203ENST00000563623 CDR1P51861 262 aa12.99□□□□□ -0.33
ABCA3-203ENST00000563623 KCNK18Q7Z418 384 aa12.99□□□□□ -0.33
ABCA3-203ENST00000563623 CASKIN2Q8WXE0 1202 aa12.99□□□□□ -0.33
ABCA3-203ENST00000563623 KAT2BQ92831 832 aa12.99□□□□□ -0.33
ABCA3-203ENST00000563623 IQCDQ96DY2 449 aa12.99□□□□□ -0.33
ABCA3-203ENST00000563623 DPH5Q9H2P9 285 aa12.99□□□□□ -0.33
ABCA3-203ENST00000563623 MYH3P11055 1940 aa12.99□□□□□ -0.33
ABCA3-203ENST00000563623 A0A087X0T9 212 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms