RNA–Protein interactions for RNA: ENST00000562729.5

CHRFAM7A-204, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 4

Gene CHRFAM7A, Length 573 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-204ENST00000562729 HSD17B4P51659 736 aa10.73□□□□□ -0.69
CHRFAM7A-204ENST00000562729 NKX3-2P78367 333 aa10.73□□□□□ -0.69
CHRFAM7A-204ENST00000562729 SHHQ15465 462 aa10.73□□□□□ -0.69
CHRFAM7A-204ENST00000562729 TMEM63BQ5T3F8 832 aa10.73□□□□□ -0.69
CHRFAM7A-204ENST00000562729 MICU3Q86XE3 530 aa10.73□□□□□ -0.69
CHRFAM7A-204ENST00000562729 RAB11FIP4Q86YS3 637 aa10.73□□□□□ -0.69
CHRFAM7A-204ENST00000562729 CCDC82Q8N4S0 544 aa10.73□□□□□ -0.69
CHRFAM7A-204ENST00000562729 DEFB123Q8N688 67 aa10.73□□□□□ -0.69
CHRFAM7A-204ENST00000562729 HIPK3Q9H422 1215 aa10.73□□□□□ -0.69
CHRFAM7A-204ENST00000562729 COL20A1Q9P218 1284 aa10.73□□□□□ -0.69
CHRFAM7A-204ENST00000562729 CTAGE5O15320 804 aa10.72□□□□□ -0.69
CHRFAM7A-204ENST00000562729 CYTH3O43739 400 aa10.72□□□□□ -0.69
CHRFAM7A-204ENST00000562729 CDK7P50613 346 aa10.72□□□□□ -0.69
CHRFAM7A-204ENST00000562729 PURAQ00577 322 aaKnown RBP10.72□□□□□ -0.69
CHRFAM7A-204ENST00000562729 PPIGQ13427 754 aaKnown RBP eCLIP10.72□□□□□ -0.69
CHRFAM7A-204ENST00000562729 LY6KQ17RY6 165 aa10.72□□□□□ -0.69
CHRFAM7A-204ENST00000562729 GNPTABQ3T906 1256 aa10.72□□□□□ -0.69
CHRFAM7A-204ENST00000562729 MFSD5Q6N075 450 aa10.72□□□□□ -0.69
CHRFAM7A-204ENST00000562729 KCNV1Q6PIU1 500 aa10.72□□□□□ -0.69
CHRFAM7A-204ENST00000562729 DHX32Q7L7V1 743 aaKnown RBP10.72□□□□□ -0.69
CHRFAM7A-204ENST00000562729 FAM126BQ8IXS8 530 aa10.72□□□□□ -0.69
CHRFAM7A-204ENST00000562729 DHX37Q8IY37 1157 aaKnown RBP10.72□□□□□ -0.69
CHRFAM7A-204ENST00000562729 CMTR1Q8N1G2 835 aaKnown RBP10.72□□□□□ -0.69
CHRFAM7A-204ENST00000562729 COPS5Q92905 334 aa10.72□□□□□ -0.69
CHRFAM7A-204ENST00000562729 MTMR8Q96EF0 704 aa10.72□□□□□ -0.69
CHRFAM7A-204ENST00000562729 SPZ1Q9BXG8 430 aa10.72□□□□□ -0.69
CHRFAM7A-204ENST00000562729 ZBTB43O43298 467 aa10.71□□□□□ -0.69
CHRFAM7A-204ENST00000562729 SORBS3O60504 671 aa10.71□□□□□ -0.69
CHRFAM7A-204ENST00000562729 PLEKHA8P1O95397 391 aa10.71□□□□□ -0.69
CHRFAM7A-204ENST00000562729 CASTP20810 708 aaKnown RBP10.71□□□□□ -0.69
CHRFAM7A-204ENST00000562729 SMARCA1P28370 1054 aa10.71□□□□□ -0.69
CHRFAM7A-204ENST00000562729 LAMC2Q13753 1193 aa10.71□□□□□ -0.69
CHRFAM7A-204ENST00000562729 PGM5Q15124 567 aa10.71□□□□□ -0.69
CHRFAM7A-204ENST00000562729 DGKDQ16760 1214 aa10.71□□□□□ -0.69
CHRFAM7A-204ENST00000562729 C9orf50Q5SZB4 431 aa10.71□□□□□ -0.69
CHRFAM7A-204ENST00000562729 ZNF697Q5TEC3 545 aa10.71□□□□□ -0.69
CHRFAM7A-204ENST00000562729 HEATR3Q7Z4Q2 680 aa10.71□□□□□ -0.69
CHRFAM7A-204ENST00000562729 FANCBQ8NB91 859 aa10.71□□□□□ -0.69
CHRFAM7A-204ENST00000562729 AFG1LQ8WV93 481 aa10.71□□□□□ -0.69
CHRFAM7A-204ENST00000562729 TCEANC2Q96MN5 208 aa10.71□□□□□ -0.69
CHRFAM7A-204ENST00000562729 PDCD2LQ9BRP1 358 aa10.71□□□□□ -0.69
CHRFAM7A-204ENST00000562729 TRPV6Q9H1D0 765 aa10.71□□□□□ -0.69
CHRFAM7A-204ENST00000562729 MTIF3Q9H2K0 278 aaKnown RBP10.71□□□□□ -0.69
CHRFAM7A-204ENST00000562729 MLXIPQ9HAP2 919 aa10.71□□□□□ -0.69
CHRFAM7A-204ENST00000562729 RBM28Q9NW13 759 aaKnown RBP10.71□□□□□ -0.69
CHRFAM7A-204ENST00000562729 TBX21Q9UL17 535 aa10.71□□□□□ -0.69
CHRFAM7A-204ENST00000562729 VPS9D1Q9Y2B5 631 aa10.71□□□□□ -0.69
CHRFAM7A-204ENST00000562729 A6NJR5 290 aa10.7□□□□□ -0.7
CHRFAM7A-204ENST00000562729 SPDYE3A6NKU9 549 aa10.7□□□□□ -0.7
CHRFAM7A-204ENST00000562729 GOLGA8AA7E2F4 631 aa10.7□□□□□ -0.7
CHRFAM7A-204ENST00000562729 GOLGA8BA8MQT2 603 aa10.7□□□□□ -0.7
CHRFAM7A-204ENST00000562729 NOP56O00567 594 aaKnown RBP10.7□□□□□ -0.7
CHRFAM7A-204ENST00000562729 B4GALT4O60513 344 aa10.7□□□□□ -0.7
CHRFAM7A-204ENST00000562729 ARIH2O95376 493 aa10.7□□□□□ -0.7
CHRFAM7A-204ENST00000562729 MMP3P08254 477 aa10.7□□□□□ -0.7
CHRFAM7A-204ENST00000562729 CSF2RAP15509 400 aa10.7□□□□□ -0.7
CHRFAM7A-204ENST00000562729 ITGB8P26012 769 aa10.7□□□□□ -0.7
CHRFAM7A-204ENST00000562729 CYP2C18P33260 490 aa10.7□□□□□ -0.7
CHRFAM7A-204ENST00000562729 CCL23P55773 120 aa10.7□□□□□ -0.7
CHRFAM7A-204ENST00000562729 RTN1Q16799 776 aa10.7□□□□□ -0.7
CHRFAM7A-204ENST00000562729 NBPF20Q3BBV1 942 aa10.7□□□□□ -0.7
CHRFAM7A-204ENST00000562729 PSRC1Q6PGN9 363 aaPredicted RBP10.7□□□□□ -0.7
CHRFAM7A-204ENST00000562729 BLOC1S2Q6QNY1 142 aa10.7□□□□□ -0.7
CHRFAM7A-204ENST00000562729 SRBD1Q8N5C6 995 aaKnown RBP10.7□□□□□ -0.7
CHRFAM7A-204ENST00000562729 C7orf31Q8N865 590 aa10.7□□□□□ -0.7
CHRFAM7A-204ENST00000562729 RETREG2Q8NC44 543 aa10.7□□□□□ -0.7
CHRFAM7A-204ENST00000562729 OXER1Q8TDS5 423 aa10.7□□□□□ -0.7
CHRFAM7A-204ENST00000562729 SPATA33Q96N06 139 aa10.7□□□□□ -0.7
CHRFAM7A-204ENST00000562729 JAKMIP1Q96N16 626 aaKnown RBP10.7□□□□□ -0.7
CHRFAM7A-204ENST00000562729 KATNAL1Q9BW62 490 aa10.7□□□□□ -0.7
CHRFAM7A-204ENST00000562729 ALDH8A1Q9H2A2 487 aaPredicted RBP10.7□□□□□ -0.7
CHRFAM7A-204ENST00000562729 PSTPIP2Q9H939 334 aa10.7□□□□□ -0.7
CHRFAM7A-204ENST00000562729 EHMT1Q9H9B1 1298 aa10.7□□□□□ -0.7
CHRFAM7A-204ENST00000562729 TRMT13Q9NUP7 481 aaKnown RBP10.7□□□□□ -0.7
CHRFAM7A-204ENST00000562729 KIAA1217Q5T5P2 1943 aa10.7□□□□□ -0.7
CHRFAM7A-204ENST00000562729 BAZ2BQ9UIF8 2168 aaKnown RBP10.69□□□□□ -0.7
CHRFAM7A-204ENST00000562729 KLF18A0A0U1RQI7 1052 aa10.69□□□□□ -0.7
CHRFAM7A-204ENST00000562729 hCG_1642624A0A1W2PR95 340 aa10.69□□□□□ -0.7
CHRFAM7A-204ENST00000562729 OPLAHO14841 1288 aa10.69□□□□□ -0.7
CHRFAM7A-204ENST00000562729 STAM2O75886 525 aa10.69□□□□□ -0.7
CHRFAM7A-204ENST00000562729 CD4P01730 458 aa10.69□□□□□ -0.7
CHRFAM7A-204ENST00000562729 PSMA5P28066 241 aa10.69□□□□□ -0.7
CHRFAM7A-204ENST00000562729 ARHGAP1Q07960 439 aa10.69□□□□□ -0.7
CHRFAM7A-204ENST00000562729 NFRKBQ6P4R8 1299 aa10.69□□□□□ -0.7
CHRFAM7A-204ENST00000562729 CCDC62Q6P9F0 684 aa10.69□□□□□ -0.7
CHRFAM7A-204ENST00000562729 TMTC3Q6ZXV5 915 aa10.69□□□□□ -0.7
CHRFAM7A-204ENST00000562729 Q7L0L9 218 aa10.69□□□□□ -0.7
CHRFAM7A-204ENST00000562729 VSIG10LQ86VR7 867 aa10.69□□□□□ -0.7
CHRFAM7A-204ENST00000562729 SGMS1Q86VZ5 419 aa10.69□□□□□ -0.7
CHRFAM7A-204ENST00000562729 RPUSD2Q8IZ73 545 aaKnown RBP10.69□□□□□ -0.7
CHRFAM7A-204ENST00000562729 CCDC155Q8N6L0 562 aa10.69□□□□□ -0.7
CHRFAM7A-204ENST00000562729 SLC43A3Q8NBI5 491 aa10.69□□□□□ -0.7
CHRFAM7A-204ENST00000562729 FAM161BQ96MY7 647 aa10.69□□□□□ -0.7
CHRFAM7A-204ENST00000562729 PPP4R2Q9NY27 417 aa10.69□□□□□ -0.7
CHRFAM7A-204ENST00000562729 DDX41Q9UJV9 622 aaKnown RBP10.69□□□□□ -0.7
CHRFAM7A-204ENST00000562729 GRIN2DO15399 1336 aa10.68□□□□□ -0.7
CHRFAM7A-204ENST00000562729 CCDC196A0A1B0GTZ2 297 aa10.68□□□□□ -0.7
CHRFAM7A-204ENST00000562729 GGPS1O95749 300 aa10.68□□□□□ -0.7
CHRFAM7A-204ENST00000562729 FGBP02675 491 aa10.68□□□□□ -0.7
CHRFAM7A-204ENST00000562729 ACRP10323 421 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms