RNA–Protein interactions for RNA: ENST00000562389.5

CLK3-207, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-207ENST00000562389 CPT1AP50416 773 aa19.1■□□□□ 0.65
CLK3-207ENST00000562389 ARHGAP1Q07960 439 aa19.1■□□□□ 0.65
CLK3-207ENST00000562389 SEMA3FQ13275 785 aa19.1■□□□□ 0.65
CLK3-207ENST00000562389 NPY5RQ15761 445 aa19.1■□□□□ 0.65
CLK3-207ENST00000562389 BLIDQ8IZY5 108 aa19.1■□□□□ 0.65
CLK3-207ENST00000562389 RASGRP4Q8TDF6 673 aa19.1■□□□□ 0.65
CLK3-207ENST00000562389 CRYGNQ8WXF5 182 aa19.1■□□□□ 0.65
CLK3-207ENST00000562389 DOCK5Q9H7D0 1870 aa19.09■□□□□ 0.65
CLK3-207ENST00000562389 M0R2N6 131 aa19.09■□□□□ 0.65
CLK3-207ENST00000562389 ITGB5P18084 799 aa19.09■□□□□ 0.65
CLK3-207ENST00000562389 UBA1P22314 1058 aaKnown RBP19.09■□□□□ 0.65
CLK3-207ENST00000562389 ARHGAP4P98171 946 aa19.09■□□□□ 0.65
CLK3-207ENST00000562389 SNX17Q15036 470 aa19.09■□□□□ 0.65
CLK3-207ENST00000562389 CDHR1Q96JP9 859 aa19.09■□□□□ 0.65
CLK3-207ENST00000562389 JADE2Q9NQC1 790 aa19.09■□□□□ 0.65
CLK3-207ENST00000562389 KCNJ14Q9UNX9 436 aa19.09■□□□□ 0.65
CLK3-207ENST00000562389 A6NJR5 290 aa19.08■□□□□ 0.64
CLK3-207ENST00000562389 CYP3A4P08684 503 aa19.08■□□□□ 0.64
CLK3-207ENST00000562389 HMGN5P82970 282 aaKnown RBP19.08■□□□□ 0.64
CLK3-207ENST00000562389 SP2Q02086 613 aa19.08■□□□□ 0.64
CLK3-207ENST00000562389 LAMC2Q13753 1193 aa19.08■□□□□ 0.64
CLK3-207ENST00000562389 LRRC26Q2I0M4 334 aa19.08■□□□□ 0.64
CLK3-207ENST00000562389 BRDTQ58F21 947 aaPredicted RBP19.08■□□□□ 0.64
CLK3-207ENST00000562389 CELF3Q5SZQ8 465 aaKnown RBP19.08■□□□□ 0.64
CLK3-207ENST00000562389 C1orf53Q5VUE5 145 aa19.08■□□□□ 0.64
CLK3-207ENST00000562389 SLC39A5Q6ZMH5 540 aa19.08■□□□□ 0.64
CLK3-207ENST00000562389 FERMT2Q96AC1 680 aa19.08■□□□□ 0.64
CLK3-207ENST00000562389 TMX3Q96JJ7 454 aa19.08■□□□□ 0.64
CLK3-207ENST00000562389 MXRA8Q9BRK3 442 aa19.08■□□□□ 0.64
CLK3-207ENST00000562389 STARD7Q9NQZ5 370 aa19.08■□□□□ 0.64
CLK3-207ENST00000562389 ELP1O95163 1332 aa19.07■□□□□ 0.64
CLK3-207ENST00000562389 MAFGO15525 162 aa19.07■□□□□ 0.64
CLK3-207ENST00000562389 CABYRO75952 493 aa19.07■□□□□ 0.64
CLK3-207ENST00000562389 GGPS1O95749 300 aa19.07■□□□□ 0.64
CLK3-207ENST00000562389 MTMR1Q13613 665 aa19.07■□□□□ 0.64
CLK3-207ENST00000562389 NEDD9Q14511 834 aa19.07■□□□□ 0.64
CLK3-207ENST00000562389 CEP55Q53EZ4 464 aa19.07■□□□□ 0.64
CLK3-207ENST00000562389 MYSM1Q5VVJ2 828 aa19.07■□□□□ 0.64
CLK3-207ENST00000562389 DHX37Q8IY37 1157 aaKnown RBP19.07■□□□□ 0.64
CLK3-207ENST00000562389 DPF3Q92784 378 aa19.07■□□□□ 0.64
CLK3-207ENST00000562389 GLT1D1Q96MS3 346 aa19.07■□□□□ 0.64
CLK3-207ENST00000562389 SENP7Q9BQF6 1050 aa19.07■□□□□ 0.64
CLK3-207ENST00000562389 GJB4Q9NTQ9 266 aa19.07■□□□□ 0.64
CLK3-207ENST00000562389 POLR3EQ9NVU0 708 aa19.07■□□□□ 0.64
CLK3-207ENST00000562389 SCN10AQ9Y5Y9 1956 aa19.06■□□□□ 0.64
CLK3-207ENST00000562389 KPNA6O60684 536 aa19.06■□□□□ 0.64
CLK3-207ENST00000562389 MMP3P08254 477 aa19.06■□□□□ 0.64
CLK3-207ENST00000562389 ATN1P54259 1190 aaPredicted RBP19.06■□□□□ 0.64
CLK3-207ENST00000562389 PURAQ00577 322 aaKnown RBP19.06■□□□□ 0.64
CLK3-207ENST00000562389 CXCL17Q6UXB2 119 aa19.06■□□□□ 0.64
CLK3-207ENST00000562389 NIPA1Q7RTP0 329 aa19.06■□□□□ 0.64
CLK3-207ENST00000562389 PPTC7Q8NI37 304 aa19.06■□□□□ 0.64
CLK3-207ENST00000562389 AFG1LQ8WV93 481 aa19.06■□□□□ 0.64
CLK3-207ENST00000562389 EVI5O60447 810 aa19.05■□□□□ 0.64
CLK3-207ENST00000562389 KCNA2P16389 499 aa19.05■□□□□ 0.64
CLK3-207ENST00000562389 ZNF76P36508 570 aa19.05■□□□□ 0.64
CLK3-207ENST00000562389 RTP1P59025 263 aa19.05■□□□□ 0.64
CLK3-207ENST00000562389 METTL7BQ6UX53 244 aa19.05■□□□□ 0.64
CLK3-207ENST00000562389 KRT25Q7Z3Z0 450 aa19.05■□□□□ 0.64
CLK3-207ENST00000562389 GIMAP8Q8ND71 665 aaPredicted RBP19.05■□□□□ 0.64
CLK3-207ENST00000562389 MLXIPQ9HAP2 919 aa19.05■□□□□ 0.64
CLK3-207ENST00000562389 PDE4DIPQ5VU43 2346 aa19.05■□□□□ 0.64
CLK3-207ENST00000562389 A0A0U1RQG5 324 aaPredicted RBP19.04■□□□□ 0.64
CLK3-207ENST00000562389 FAM86B1E9PN63 330 aa19.04■□□□□ 0.64
CLK3-207ENST00000562389 MEIS1O00470 390 aa19.04■□□□□ 0.64
CLK3-207ENST00000562389 MMP1P03956 469 aa19.04■□□□□ 0.64
CLK3-207ENST00000562389 MYL3P08590 195 aa19.04■□□□□ 0.64
CLK3-207ENST00000562389 FAM86B2P0C5J1 330 aa19.04■□□□□ 0.64
CLK3-207ENST00000562389 HOXD8P13378 290 aaPredicted RBP19.04■□□□□ 0.64
CLK3-207ENST00000562389 CIITAP33076 1130 aa19.04■□□□□ 0.64
CLK3-207ENST00000562389 USP11P51784 963 aa19.04■□□□□ 0.64
CLK3-207ENST00000562389 TRIM29Q14134 588 aa19.04■□□□□ 0.64
CLK3-207ENST00000562389 CYP2W1Q8TAV3 490 aa19.04■□□□□ 0.64
CLK3-207ENST00000562389 TBCKQ8TEA7 893 aa19.04■□□□□ 0.64
CLK3-207ENST00000562389 SPATA33Q96N06 139 aa19.04■□□□□ 0.64
CLK3-207ENST00000562389 MTG1Q9BT17 334 aaPredicted RBP19.04■□□□□ 0.64
CLK3-207ENST00000562389 BRMS1Q9HCU9 246 aa19.04■□□□□ 0.64
CLK3-207ENST00000562389 KCNH7Q9NS40 1196 aa19.04■□□□□ 0.64
CLK3-207ENST00000562389 IGLV3-22A0A075B6J6 115 aa19.03■□□□□ 0.64
CLK3-207ENST00000562389 ATP9AO75110 1047 aa19.03■□□□□ 0.64
CLK3-207ENST00000562389 KRT2P35908 639 aa19.03■□□□□ 0.64
CLK3-207ENST00000562389 SETQ01105 290 aaPredicted RBP19.03■□□□□ 0.64
CLK3-207ENST00000562389 NONOQ15233 471 aaKnown RBP eCLIP19.03■□□□□ 0.64
CLK3-207ENST00000562389 DGKDQ16760 1214 aa19.03■□□□□ 0.64
CLK3-207ENST00000562389 HSDL1Q3SXM5 330 aa19.03■□□□□ 0.64
CLK3-207ENST00000562389 KRT40Q6A162 431 aa19.03■□□□□ 0.64
CLK3-207ENST00000562389 CYFIP1Q7L576 1253 aa19.03■□□□□ 0.64
CLK3-207ENST00000562389 VTI1AQ96AJ9 217 aa19.03■□□□□ 0.64
CLK3-207ENST00000562389 SEZ6LQ9BYH1 1024 aa19.03■□□□□ 0.64
CLK3-207ENST00000562389 CCDC194A0A1B0GVG4 234 aa19.02■□□□□ 0.64
CLK3-207ENST00000562389 EDIL3O43854 480 aa19.02■□□□□ 0.64
CLK3-207ENST00000562389 SORBS3O60504 671 aa19.02■□□□□ 0.64
CLK3-207ENST00000562389 ARP10275 920 aa19.02■□□□□ 0.64
CLK3-207ENST00000562389 TRIM60Q495X7 471 aa19.02■□□□□ 0.64
CLK3-207ENST00000562389 PLA2G4DQ86XP0 818 aa19.02■□□□□ 0.64
CLK3-207ENST00000562389 C7orf61Q8IZ16 206 aa19.02■□□□□ 0.64
CLK3-207ENST00000562389 FAM184AQ8NB25 1140 aa19.02■□□□□ 0.64
CLK3-207ENST00000562389 SLC43A3Q8NBI5 491 aa19.02■□□□□ 0.64
CLK3-207ENST00000562389 OXER1Q8TDS5 423 aa19.02■□□□□ 0.64
CLK3-207ENST00000562389 C8orf76Q96K31 380 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms