RNA–Protein interactions for RNA: ENST00000562173.1

UBR1-203, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-203ENST00000562173 ZNF277Q9NRM2 450 aaPredicted RBP7.42□□□□□ -1.22
UBR1-203ENST00000562173 WASHC2AQ641Q2 1341 aa7.42□□□□□ -1.22
UBR1-203ENST00000562173 COL4A1P02462 1669 aa7.41□□□□□ -1.22
UBR1-203ENST00000562173 SHTN1A0MZ66 631 aa7.41□□□□□ -1.22
UBR1-203ENST00000562173 PRNPP04156 253 aa7.41□□□□□ -1.22
UBR1-203ENST00000562173 POLR2BP30876 1174 aaKnown RBP7.41□□□□□ -1.22
UBR1-203ENST00000562173 PMS1P54277 932 aaKnown RBP7.41□□□□□ -1.22
UBR1-203ENST00000562173 CDH24Q86UP0 819 aa7.41□□□□□ -1.22
UBR1-203ENST00000562173 STK11IPQ8N1F8 1099 aa7.41□□□□□ -1.22
UBR1-203ENST00000562173 ANAPC16Q96DE5 110 aa7.41□□□□□ -1.22
UBR1-203ENST00000562173 POLR3GLQ9BT43 218 aa7.41□□□□□ -1.22
UBR1-203ENST00000562173 MCOLN1Q9GZU1 580 aa7.41□□□□□ -1.22
UBR1-203ENST00000562173 BSDC1Q9NW68 430 aaPredicted RBP7.41□□□□□ -1.22
UBR1-203ENST00000562173 SUCOQ9UBS9 1254 aaKnown RBP7.41□□□□□ -1.22
UBR1-203ENST00000562173 KCNH3Q9ULD8 1083 aa7.41□□□□□ -1.22
UBR1-203ENST00000562173 SNX11Q9Y5W9 270 aa7.41□□□□□ -1.22
UBR1-203ENST00000562173 CAPN6Q9Y6Q1 641 aa7.41□□□□□ -1.22
UBR1-203ENST00000562173 WDR33Q9C0J8 1336 aaKnown RBP7.41□□□□□ -1.22
UBR1-203ENST00000562173 TMEM265A0A087WTH1 108 aa7.4□□□□□ -1.22
UBR1-203ENST00000562173 SPINK2P20155 84 aa7.4□□□□□ -1.22
UBR1-203ENST00000562173 THAP5Q7Z6K1 395 aa7.4□□□□□ -1.22
UBR1-203ENST00000562173 TTC6Q86TZ1 520 aa7.4□□□□□ -1.22
UBR1-203ENST00000562173 VSIG10LQ86VR7 867 aa7.4□□□□□ -1.22
UBR1-203ENST00000562173 DTX1Q86Y01 620 aa7.4□□□□□ -1.22
UBR1-203ENST00000562173 SPACA3Q8IXA5 215 aa7.4□□□□□ -1.22
UBR1-203ENST00000562173 FAM169BQ8N8A8 192 aa7.4□□□□□ -1.22
UBR1-203ENST00000562173 RIN3Q8TB24 985 aa7.4□□□□□ -1.22
UBR1-203ENST00000562173 SLC6A18Q96N87 628 aa7.4□□□□□ -1.22
UBR1-203ENST00000562173 KRTAP9-2Q9BYQ4 174 aa7.4□□□□□ -1.22
UBR1-203ENST00000562173 ZNF408Q9H9D4 720 aa7.4□□□□□ -1.22
UBR1-203ENST00000562173 PRR13Q9NZ81 148 aa7.4□□□□□ -1.22
UBR1-203ENST00000562173 NARFQ9UHQ1 456 aa7.4□□□□□ -1.22
UBR1-203ENST00000562173 MRC1P22897 1456 aa7.39□□□□□ -1.23
UBR1-203ENST00000562173 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.39□□□□□ -1.23
UBR1-203ENST00000562173 ERVV-2B6SEH9 535 aa7.39□□□□□ -1.23
UBR1-203ENST00000562173 ADAMTS4O75173 837 aa7.39□□□□□ -1.23
UBR1-203ENST00000562173 ATP2B1P20020 1258 aa7.39□□□□□ -1.23
UBR1-203ENST00000562173 MTHFSP49914 203 aa7.39□□□□□ -1.23
UBR1-203ENST00000562173 CST9Q5W186 159 aa7.39□□□□□ -1.23
UBR1-203ENST00000562173 UNC5AQ6ZN44 842 aa7.39□□□□□ -1.23
UBR1-203ENST00000562173 FAM181AQ8N9Y4 354 aa7.39□□□□□ -1.23
UBR1-203ENST00000562173 DTWD2Q8NBA8 298 aa7.39□□□□□ -1.23
UBR1-203ENST00000562173 VWCEQ96DN2 955 aa7.39□□□□□ -1.23
UBR1-203ENST00000562173 ACTR10Q9NZ32 417 aa7.39□□□□□ -1.23
UBR1-203ENST00000562173 ZC3H7BQ9UGR2 993 aaKnown RBP7.39□□□□□ -1.23
UBR1-203ENST00000562173 LAMB2P55268 1798 aa7.38□□□□□ -1.23
UBR1-203ENST00000562173 SNED1Q8TER0 1413 aa7.38□□□□□ -1.23
UBR1-203ENST00000562173 A0A1W2PQH9 124 aa7.38□□□□□ -1.23
UBR1-203ENST00000562173 FAM155AB1AL88 458 aaPredicted RBP7.38□□□□□ -1.23
UBR1-203ENST00000562173 STK10O94804 968 aaKnown RBP7.38□□□□□ -1.23
UBR1-203ENST00000562173 A1BGP04217 495 aa7.38□□□□□ -1.23
UBR1-203ENST00000562173 HMOX1P09601 288 aa7.38□□□□□ -1.23
UBR1-203ENST00000562173 ITIH2P19823 946 aa7.38□□□□□ -1.23
UBR1-203ENST00000562173 EPS15P42566 896 aa7.38□□□□□ -1.23
UBR1-203ENST00000562173 DEFB115Q30KQ5 88 aa7.38□□□□□ -1.23
UBR1-203ENST00000562173 NBPF12Q5TAG4 269 aaPredicted RBP7.38□□□□□ -1.23
UBR1-203ENST00000562173 SULT6B1Q6IMI4 303 aa7.38□□□□□ -1.23
UBR1-203ENST00000562173 RUFY4Q6ZNE9 571 aa7.38□□□□□ -1.23
UBR1-203ENST00000562173 CNTROBQ8N137 903 aa7.38□□□□□ -1.23
UBR1-203ENST00000562173 ZNF214Q9UL59 606 aaPredicted RBP7.38□□□□□ -1.23
UBR1-203ENST00000562173 ABT1Q9ULW3 272 aaKnown RBP7.38□□□□□ -1.23
UBR1-203ENST00000562173 NUP98P52948 1817 aa7.38□□□□□ -1.23
UBR1-203ENST00000562173 RASSF10A6NK89 507 aa7.37□□□□□ -1.23
UBR1-203ENST00000562173 H0YIN7 160 aa7.37□□□□□ -1.23
UBR1-203ENST00000562173 TCERG1O14776 1098 aaKnown RBP7.37□□□□□ -1.23
UBR1-203ENST00000562173 SMAD7O15105 426 aaKnown RBP7.37□□□□□ -1.23
UBR1-203ENST00000562173 RNMTO43148 476 aaKnown RBP7.37□□□□□ -1.23
UBR1-203ENST00000562173 HOXA10P31260 410 aaPredicted RBP7.37□□□□□ -1.23
UBR1-203ENST00000562173 EPHX2P34913 555 aa7.37□□□□□ -1.23
UBR1-203ENST00000562173 RGS19P49795 217 aa7.37□□□□□ -1.23
UBR1-203ENST00000562173 PRKCQQ04759 706 aa7.37□□□□□ -1.23
UBR1-203ENST00000562173 NKPD1Q17RQ9 610 aa7.37□□□□□ -1.23
UBR1-203ENST00000562173 TMEM192Q8IY95 271 aa7.37□□□□□ -1.23
UBR1-203ENST00000562173 CKAP2LQ8IYA6 745 aa7.37□□□□□ -1.23
UBR1-203ENST00000562173 PLD6Q8N2A8 252 aaKnown RBP7.37□□□□□ -1.23
UBR1-203ENST00000562173 HRASLS5Q96KN8 279 aa7.37□□□□□ -1.23
UBR1-203ENST00000562173 CAPNS2Q96L46 248 aa7.37□□□□□ -1.23
UBR1-203ENST00000562173 GPR62Q9BZJ7 368 aa7.37□□□□□ -1.23
UBR1-203ENST00000562173 TAOK3Q9H2K8 898 aa7.37□□□□□ -1.23
UBR1-203ENST00000562173 TRIT1Q9H3H1 467 aaKnown RBP7.37□□□□□ -1.23
UBR1-203ENST00000562173 U3KQE9 123 aa7.37□□□□□ -1.23
UBR1-203ENST00000562173 ABCC12Q96J65 1359 aa7.36□□□□□ -1.23
UBR1-203ENST00000562173 PITPNM2Q9BZ72 1349 aa7.36□□□□□ -1.23
UBR1-203ENST00000562173 PRR33A8MZF0 331 aa7.36□□□□□ -1.23
UBR1-203ENST00000562173 TNK2Q07912 1038 aa7.36□□□□□ -1.23
UBR1-203ENST00000562173 CNGB1Q14028 1251 aaPredicted RBP7.36□□□□□ -1.23
UBR1-203ENST00000562173 NCAPHQ15003 741 aa7.36□□□□□ -1.23
UBR1-203ENST00000562173 ZYXQ15942 572 aaKnown RBP7.36□□□□□ -1.23
UBR1-203ENST00000562173 LDHDQ86WU2 507 aa7.36□□□□□ -1.23
UBR1-203ENST00000562173 Q96M66 194 aa7.36□□□□□ -1.23
UBR1-203ENST00000562173 MKRN2Q9H000 416 aaKnown RBP7.36□□□□□ -1.23
UBR1-203ENST00000562173 VAV3Q9UKW4 847 aa7.36□□□□□ -1.23
UBR1-203ENST00000562173 PLAGL2Q9UPG8 496 aa7.36□□□□□ -1.23
UBR1-203ENST00000562173 ST14Q9Y5Y6 855 aa7.36□□□□□ -1.23
UBR1-203ENST00000562173 AKAP11Q9UKA4 1901 aa7.36□□□□□ -1.23
UBR1-203ENST00000562173 KIF24Q5T7B8 1368 aa7.35□□□□□ -1.23
UBR1-203ENST00000562173 KRTAP9-6A0A140TA67 174 aa7.35□□□□□ -1.23
UBR1-203ENST00000562173 CAMTA2O94983 1202 aa7.35□□□□□ -1.23
UBR1-203ENST00000562173 CBX7O95931 251 aa7.35□□□□□ -1.23
UBR1-203ENST00000562173 ETFBP38117 255 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms