RNA–Protein interactions for RNA: ENST00000561630.1

CDR2-202, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-202ENST00000561630 SPATA31C2B4DYI2 1134 aa27.37■■□□□ 1.97
CDR2-202ENST00000561630 HOXD8P13378 290 aaPredicted RBP27.37■■□□□ 1.97
CDR2-202ENST00000561630 NAPAP54920 295 aa27.37■■□□□ 1.97
CDR2-202ENST00000561630 EVCP57679 992 aa27.37■■□□□ 1.97
CDR2-202ENST00000561630 PTPN11Q06124 597 aaPredicted RBP27.37■■□□□ 1.97
CDR2-202ENST00000561630 UBE2SQ16763 222 aa27.37■■□□□ 1.97
CDR2-202ENST00000561630 TMEM199Q8N511 208 aa27.37■■□□□ 1.97
CDR2-202ENST00000561630 KAT2BQ92831 832 aa27.37■■□□□ 1.97
CDR2-202ENST00000561630 SPATA33Q96N06 139 aa27.37■■□□□ 1.97
CDR2-202ENST00000561630 NOC4LQ9BVI4 516 aaKnown RBP27.37■■□□□ 1.97
CDR2-202ENST00000561630 BARHL2Q9NY43 387 aa27.37■■□□□ 1.97
CDR2-202ENST00000561630 CYP46A1Q9Y6A2 500 aa27.37■■□□□ 1.97
CDR2-202ENST00000561630 FIBPO43427 364 aa27.36■■□□□ 1.97
CDR2-202ENST00000561630 CYP2C18P33260 490 aa27.36■■□□□ 1.97
CDR2-202ENST00000561630 FAM47CQ5HY64 1035 aa27.36■■□□□ 1.97
CDR2-202ENST00000561630 SCN10AQ9Y5Y9 1956 aa27.35■■□□□ 1.97
CDR2-202ENST00000561630 SPDYE3A6NKU9 549 aa27.35■■□□□ 1.97
CDR2-202ENST00000561630 STXBP3O00186 592 aa27.35■■□□□ 1.97
CDR2-202ENST00000561630 PPFIA4O75335 1185 aa27.35■■□□□ 1.97
CDR2-202ENST00000561630 CSF2RAP15509 400 aa27.35■■□□□ 1.97
CDR2-202ENST00000561630 SEMA3FQ13275 785 aa27.35■■□□□ 1.97
CDR2-202ENST00000561630 PPIGQ13427 754 aaKnown RBP eCLIP27.35■■□□□ 1.973e-10■□□□□ 9.3
CDR2-202ENST00000561630 HSDL1Q3SXM5 330 aa27.35■■□□□ 1.97
CDR2-202ENST00000561630 MLXIPQ9HAP2 919 aa27.35■■□□□ 1.97
CDR2-202ENST00000561630 RIC8AQ9NPQ8 531 aa27.35■■□□□ 1.97
CDR2-202ENST00000561630 SORBS3O60504 671 aa27.34■■□□□ 1.97
CDR2-202ENST00000561630 NEDD9Q14511 834 aa27.34■■□□□ 1.97
CDR2-202ENST00000561630 PPP1R13LQ8WUF5 828 aa27.34■■□□□ 1.97
CDR2-202ENST00000561630 PCDHA6Q9UN73 950 aa27.34■■□□□ 1.97
CDR2-202ENST00000561630 PCDHA8Q9Y5H6 950 aa27.34■■□□□ 1.97
CDR2-202ENST00000561630 UMODL1Q5DID0 1318 aa27.34■■□□□ 1.97
CDR2-202ENST00000561630 F2P00734 622 aa27.33■■□□□ 1.97
CDR2-202ENST00000561630 PDIA3P30101 505 aaKnown RBP27.33■■□□□ 1.97
CDR2-202ENST00000561630 CHMP4BP1P59074 171 aa27.33■■□□□ 1.97
CDR2-202ENST00000561630 TOB2Q14106 344 aaPredicted RBP27.33■■□□□ 1.97
CDR2-202ENST00000561630 PFKFB3Q16875 520 aaPredicted RBP27.33■■□□□ 1.97
CDR2-202ENST00000561630 C16orf59Q7L2K0 433 aa27.33■■□□□ 1.97
CDR2-202ENST00000561630 NLRX1Q86UT6 975 aa27.33■■□□□ 1.97
CDR2-202ENST00000561630 SESTD1Q86VW0 696 aa27.33■■□□□ 1.97
CDR2-202ENST00000561630 BCAS3Q9H6U6 928 aa27.33■■□□□ 1.97
CDR2-202ENST00000561630 CYP2C9P11712 490 aa27.32■■□□□ 1.96
CDR2-202ENST00000561630 SCG2P13521 617 aa27.32■■□□□ 1.96
CDR2-202ENST00000561630 ADCY7P51828 1080 aa27.32■■□□□ 1.96
CDR2-202ENST00000561630 METTL7BQ6UX53 244 aa27.32■■□□□ 1.96
CDR2-202ENST00000561630 RNPC3Q96LT9 517 aaKnown RBP27.32■■□□□ 1.96
CDR2-202ENST00000561630 SENP7Q9BQF6 1050 aa27.32■■□□□ 1.96
CDR2-202ENST00000561630 KATNAL1Q9BW62 490 aa27.32■■□□□ 1.96
CDR2-202ENST00000561630 UPF3BQ9BZI7 483 aaKnown RBP27.32■■□□□ 1.96
CDR2-202ENST00000561630 GLT8D2Q9H1C3 349 aa27.32■■□□□ 1.96
CDR2-202ENST00000561630 SMCO2A6NFE2 343 aa27.31■■□□□ 1.96
CDR2-202ENST00000561630 PRPF3O43395 683 aaKnown RBP27.31■■□□□ 1.96
CDR2-202ENST00000561630 ZNF286BP0CG31 522 aa27.31■■□□□ 1.96
CDR2-202ENST00000561630 PSEN2P49810 448 aa27.31■■□□□ 1.96
CDR2-202ENST00000561630 NTRK3Q16288 839 aa27.31■■□□□ 1.96
CDR2-202ENST00000561630 GPRASP2Q96D09 838 aa27.31■■□□□ 1.96
CDR2-202ENST00000561630 BUD13Q9BRD0 619 aaKnown RBP eCLIP27.31■■□□□ 1.962e-16■□□□□ 8
CDR2-202ENST00000561630 WNT8AQ9H1J5 351 aa27.31■■□□□ 1.96
CDR2-202ENST00000561630 EHMT1Q9H9B1 1298 aa27.31■■□□□ 1.96
CDR2-202ENST00000561630 HAS3O00219 553 aa27.3■■□□□ 1.96
CDR2-202ENST00000561630 FOSP01100 380 aaPredicted RBP27.3■■□□□ 1.96
CDR2-202ENST00000561630 ITGB5P18084 799 aa27.3■■□□□ 1.96
CDR2-202ENST00000561630 CCL23P55773 120 aa27.3■■□□□ 1.96
CDR2-202ENST00000561630 MFSD10Q14728 455 aa27.3■■□□□ 1.96
CDR2-202ENST00000561630 CYFIP1Q7L576 1253 aa27.3■■□□□ 1.96
CDR2-202ENST00000561630 CDHR1Q96JP9 859 aa27.3■■□□□ 1.96
CDR2-202ENST00000561630 IL23AQ9NPF7 189 aa27.3■■□□□ 1.96
CDR2-202ENST00000561630 UBIAD1Q9Y5Z9 338 aa27.3■■□□□ 1.96
CDR2-202ENST00000561630 IFNAR1P17181 557 aa27.29■■□□□ 1.96
CDR2-202ENST00000561630 PKN1Q16512 942 aa27.29■■□□□ 1.96
CDR2-202ENST00000561630 KIAA0753Q2KHM9 967 aa27.29■■□□□ 1.96
CDR2-202ENST00000561630 TMEM240Q5SV17 173 aa27.29■■□□□ 1.96
CDR2-202ENST00000561630 C7orf31Q8N865 590 aa27.29■■□□□ 1.96
CDR2-202ENST00000561630 PHKBQ93100 1093 aa27.29■■□□□ 1.96
CDR2-202ENST00000561630 C16orf70Q9BSU1 422 aa27.29■■□□□ 1.96
CDR2-202ENST00000561630 NCOA5Q9HCD5 579 aaKnown RBP27.29■■□□□ 1.96
CDR2-202ENST00000561630 NOP56O00567 594 aaKnown RBP27.28■■□□□ 1.96
CDR2-202ENST00000561630 CCT2P78371 535 aaKnown RBP27.28■■□□□ 1.96
CDR2-202ENST00000561630 PTGISQ16647 500 aa27.28■■□□□ 1.96
CDR2-202ENST00000561630 GDF6Q6KF10 455 aaPredicted RBP27.28■■□□□ 1.96
CDR2-202ENST00000561630 PSRC1Q6PGN9 363 aaPredicted RBP27.28■■□□□ 1.96
CDR2-202ENST00000561630 GIMAP8Q8ND71 665 aaPredicted RBP27.28■■□□□ 1.96
CDR2-202ENST00000561630 ZNF274Q96GC6 653 aaPredicted RBP27.28■■□□□ 1.96
CDR2-202ENST00000561630 RNF26Q9BY78 433 aaPredicted RBP27.28■■□□□ 1.96
CDR2-202ENST00000561630 PDRG1Q9NUG6 133 aa27.28■■□□□ 1.96
CDR2-202ENST00000561630 GTF2IRD1Q9UHL9 959 aa27.28■■□□□ 1.96
CDR2-202ENST00000561630 NOD1Q9Y239 953 aa27.28■■□□□ 1.96
CDR2-202ENST00000561630 ESYT2A0FGR8 921 aa27.27■■□□□ 1.96
CDR2-202ENST00000561630 PITPNM1O00562 1244 aa27.27■■□□□ 1.96
CDR2-202ENST00000561630 MAFGO15525 162 aa27.27■■□□□ 1.96
CDR2-202ENST00000561630 ACRP10323 421 aa27.27■■□□□ 1.96
CDR2-202ENST00000561630 CLK2P49760 499 aaKnown RBP27.27■■□□□ 1.96
CDR2-202ENST00000561630 ANAPC15P60006 121 aa27.27■■□□□ 1.96
CDR2-202ENST00000561630 SMAD3P84022 425 aaKnown RBP27.27■■□□□ 1.96
CDR2-202ENST00000561630 AKAP17AQ02040 695 aaKnown RBP27.27■■□□□ 1.96
CDR2-202ENST00000561630 AP3B2Q13367 1082 aa27.27■■□□□ 1.96
CDR2-202ENST00000561630 CTAGE1Q96RT6 745 aa27.27■■□□□ 1.96
CDR2-202ENST00000561630 GPR20Q99678 358 aa27.27■■□□□ 1.96
CDR2-202ENST00000561630 ALG1Q9BT22 464 aa27.27■■□□□ 1.96
CDR2-202ENST00000561630 ANO3Q9BYT9 981 aa27.27■■□□□ 1.96
CDR2-202ENST00000561630 JADE2Q9NQC1 790 aa27.27■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms