RNA–Protein interactions for RNA: ENST00000561623.5

GTF3C1-202, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,015 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-202ENST00000561623 NSFP46459 744 aaKnown RBP11.07□□□□□ -0.64
GTF3C1-202ENST00000561623 RNASELQ05823 741 aaKnown RBP11.07□□□□□ -0.64
GTF3C1-202ENST00000561623 HIPK4Q8NE63 616 aa11.07□□□□□ -0.64
GTF3C1-202ENST00000561623 GABPB2Q8TAK5 448 aaPredicted RBP11.07□□□□□ -0.64
GTF3C1-202ENST00000561623 KDM5DQ9BY66 1539 aa11.07□□□□□ -0.64
GTF3C1-202ENST00000561623 CLIC2O15247 247 aa11.07□□□□□ -0.64
GTF3C1-202ENST00000561623 AFPP02771 609 aaKnown RBP11.07□□□□□ -0.64
GTF3C1-202ENST00000561623 ASPHQ12797 758 aa11.07□□□□□ -0.64
GTF3C1-202ENST00000561623 PARP10Q53GL7 1025 aa11.07□□□□□ -0.64
GTF3C1-202ENST00000561623 TTLL7Q6ZT98 887 aa11.07□□□□□ -0.64
GTF3C1-202ENST00000561623 DHX40Q8IX18 779 aaKnown RBP11.07□□□□□ -0.64
GTF3C1-202ENST00000561623 FLAD1Q8NFF5 587 aa11.07□□□□□ -0.64
GTF3C1-202ENST00000561623 SLC4A7Q9Y6M7 1214 aa11.07□□□□□ -0.64
GTF3C1-202ENST00000561623 SHANK2Q9UPX8 1470 aa11.07□□□□□ -0.64
GTF3C1-202ENST00000561623 ESYT3A0FGR9 886 aa11.07□□□□□ -0.64
GTF3C1-202ENST00000561623 H7C0C1 242 aa11.07□□□□□ -0.64
GTF3C1-202ENST00000561623 APOEP02649 317 aa11.07□□□□□ -0.64
GTF3C1-202ENST00000561623 ATP5OP48047 213 aa11.07□□□□□ -0.64
GTF3C1-202ENST00000561623 R3HDM1Q15032 1099 aaKnown RBP11.07□□□□□ -0.64
GTF3C1-202ENST00000561623 DNAJC10Q8IXB1 793 aa11.07□□□□□ -0.64
GTF3C1-202ENST00000561623 C2orf69Q8N8R5 385 aa11.07□□□□□ -0.64
GTF3C1-202ENST00000561623 ANO3Q9BYT9 981 aa11.07□□□□□ -0.64
GTF3C1-202ENST00000561623 G3BP2Q9UN86 482 aaKnown RBP11.07□□□□□ -0.64
GTF3C1-202ENST00000561623 THRAP3Q9Y2W1 955 aaKnown RBP11.07□□□□□ -0.64
GTF3C1-202ENST00000561623 MGEA5O60502 916 aa11.07□□□□□ -0.64
GTF3C1-202ENST00000561623 NSMFQ6X4W1 530 aa11.07□□□□□ -0.64
GTF3C1-202ENST00000561623 PARP9Q8IXQ6 854 aa11.07□□□□□ -0.64
GTF3C1-202ENST00000561623 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.07□□□□□ -0.64
GTF3C1-202ENST00000561623 MAML1Q92585 1016 aa11.07□□□□□ -0.64
GTF3C1-202ENST00000561623 GSTA1P08263 222 aa11.07□□□□□ -0.64
GTF3C1-202ENST00000561623 GSTA2P09210 222 aa11.07□□□□□ -0.64
GTF3C1-202ENST00000561623 ANKRD20A4Q4UJ75 823 aa11.07□□□□□ -0.64
GTF3C1-202ENST00000561623 ANKRD20A8PQ5CZ79 823 aa11.07□□□□□ -0.64
GTF3C1-202ENST00000561623 ANKRD20A2Q5SQ80 823 aa11.07□□□□□ -0.64
GTF3C1-202ENST00000561623 ANKRD20A1Q5TYW2 823 aa11.07□□□□□ -0.64
GTF3C1-202ENST00000561623 ARMCX5Q6P1M9 558 aa11.07□□□□□ -0.64
GTF3C1-202ENST00000561623 THAP9Q9H5L6 903 aa11.07□□□□□ -0.64
GTF3C1-202ENST00000561623 MLXIPLQ9NP71 852 aa11.07□□□□□ -0.64
GTF3C1-202ENST00000561623 RNF14Q9UBS8 474 aa11.07□□□□□ -0.64
GTF3C1-202ENST00000561623 ANGPTL2Q9UKU9 493 aa11.07□□□□□ -0.64
GTF3C1-202ENST00000561623 ZBTB12Q9Y330 459 aaPredicted RBP11.07□□□□□ -0.64
GTF3C1-202ENST00000561623 TSPOAP1O95153 1857 aa11.06□□□□□ -0.64
GTF3C1-202ENST00000561623 MAPK4P31152 587 aa11.06□□□□□ -0.64
GTF3C1-202ENST00000561623 PABPC4Q13310 644 aaKnown RBP eCLIP11.06□□□□□ -0.645e-6■■■■■ 27.5
GTF3C1-202ENST00000561623 CEP70Q8NHQ1 597 aa11.06□□□□□ -0.64
GTF3C1-202ENST00000561623 FAM193BQ96PV7 902 aaPredicted RBP11.06□□□□□ -0.64
GTF3C1-202ENST00000561623 SH2D4AQ9H788 454 aa11.06□□□□□ -0.64
GTF3C1-202ENST00000561623 MLXIPQ9HAP2 919 aa11.06□□□□□ -0.64
GTF3C1-202ENST00000561623 ABHD10Q9NUJ1 306 aa11.06□□□□□ -0.64
GTF3C1-202ENST00000561623 N4BP1O75113 896 aaKnown RBP11.06□□□□□ -0.64
GTF3C1-202ENST00000561623 RNF8O76064 485 aa11.06□□□□□ -0.64
GTF3C1-202ENST00000561623 ESRRAP11474 423 aaPredicted RBP11.06□□□□□ -0.64
GTF3C1-202ENST00000561623 DYNLT1P63172 113 aa11.06□□□□□ -0.64
GTF3C1-202ENST00000561623 SRLQ86TD4 932 aa11.06□□□□□ -0.64
GTF3C1-202ENST00000561623 RFX6Q8HWS3 928 aa11.06□□□□□ -0.64
GTF3C1-202ENST00000561623 ABCC12Q96J65 1359 aa11.06□□□□□ -0.64
GTF3C1-202ENST00000561623 ADGRL2O95490 1459 aa11.06□□□□□ -0.64
GTF3C1-202ENST00000561623 MYO1FO00160 1098 aa11.06□□□□□ -0.64
GTF3C1-202ENST00000561623 PALMO75781 387 aa11.06□□□□□ -0.64
GTF3C1-202ENST00000561623 SERPING1P05155 500 aa11.06□□□□□ -0.64
GTF3C1-202ENST00000561623 PHKA1P46020 1223 aa11.06□□□□□ -0.64
GTF3C1-202ENST00000561623 PDE1BQ01064 536 aa11.06□□□□□ -0.64
GTF3C1-202ENST00000561623 NECTIN1Q15223 517 aa11.06□□□□□ -0.64
GTF3C1-202ENST00000561623 FAM47EQ6ZV65 393 aa11.06□□□□□ -0.64
GTF3C1-202ENST00000561623 NLRP14Q86W24 1093 aa11.06□□□□□ -0.64
GTF3C1-202ENST00000561623 GGA1Q9UJY5 639 aa11.06□□□□□ -0.64
GTF3C1-202ENST00000561623 COL4A3BPQ9Y5P4 624 aa11.06□□□□□ -0.64
GTF3C1-202ENST00000561623 EXOC1LA0A1B0GW35 172 aa11.06□□□□□ -0.64
GTF3C1-202ENST00000561623 NCK2O43639 380 aa11.06□□□□□ -0.64
GTF3C1-202ENST00000561623 PLS3P13797 630 aa11.06□□□□□ -0.64
GTF3C1-202ENST00000561623 MAGOHP61326 146 aaKnown RBP11.06□□□□□ -0.64
GTF3C1-202ENST00000561623 MYO1EQ12965 1108 aa11.06□□□□□ -0.64
GTF3C1-202ENST00000561623 GNPTABQ3T906 1256 aa11.06□□□□□ -0.64
GTF3C1-202ENST00000561623 FBXW10Q5XX13 1052 aa11.06□□□□□ -0.64
GTF3C1-202ENST00000561623 PCDHA4Q9UN74 947 aa11.06□□□□□ -0.64
GTF3C1-202ENST00000561623 ZNF518AQ6AHZ1 1483 aa11.06□□□□□ -0.64
GTF3C1-202ENST00000561623 TOM1L1O75674 476 aa11.06□□□□□ -0.64
GTF3C1-202ENST00000561623 TMOD1P28289 359 aa11.06□□□□□ -0.64
GTF3C1-202ENST00000561623 CCDC125Q86Z20 511 aa11.06□□□□□ -0.64
GTF3C1-202ENST00000561623 CENPKQ9BS16 269 aa11.06□□□□□ -0.64
GTF3C1-202ENST00000561623 SRPRBQ9Y5M8 271 aaKnown RBP11.06□□□□□ -0.64
GTF3C1-202ENST00000561623 CASP2P42575 452 aa11.05□□□□□ -0.64
GTF3C1-202ENST00000561623 TRIM50Q86XT4 487 aa11.05□□□□□ -0.64
GTF3C1-202ENST00000561623 HAUS1Q96CS2 278 aa11.05□□□□□ -0.64
GTF3C1-202ENST00000561623 GDAQ9Y2T3 454 aa11.05□□□□□ -0.64
GTF3C1-202ENST00000561623 MYOM2P54296 1465 aa11.05□□□□□ -0.64
GTF3C1-202ENST00000561623 LIG4P49917 911 aa11.05□□□□□ -0.64
GTF3C1-202ENST00000561623 TOB2Q14106 344 aaPredicted RBP11.05□□□□□ -0.64
GTF3C1-202ENST00000561623 SLMAPQ14BN4 828 aa11.05□□□□□ -0.64
GTF3C1-202ENST00000561623 DLGAP5Q15398 846 aa11.05□□□□□ -0.64
GTF3C1-202ENST00000561623 SLFN12Q8IYM2 578 aa11.05□□□□□ -0.64
GTF3C1-202ENST00000561623 PI4K2BQ8TCG2 481 aa11.05□□□□□ -0.64
GTF3C1-202ENST00000561623 CCHCR1Q8TD31 782 aa11.05□□□□□ -0.64
GTF3C1-202ENST00000561623 TEKT1Q969V4 418 aa11.05□□□□□ -0.64
GTF3C1-202ENST00000561623 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.05□□□□□ -0.64
GTF3C1-202ENST00000561623 WDR62O43379 1518 aa11.05□□□□□ -0.64
GTF3C1-202ENST00000561623 EIF4G3O43432 1585 aaKnown RBP11.05□□□□□ -0.64
GTF3C1-202ENST00000561623 FGGP02679 453 aa11.05□□□□□ -0.64
GTF3C1-202ENST00000561623 KRT3P12035 628 aa11.05□□□□□ -0.64
GTF3C1-202ENST00000561623 CYP2C19P33261 490 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms