RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-231ENST00000561395 ARL6IP4Q66PJ3 421 aaKnown RBP8.53□□□□□ -1.04
TPM1-231ENST00000561395 NEK8Q86SG6 692 aa8.53□□□□□ -1.04
TPM1-231ENST00000561395 C4orf32Q8N8J7 132 aa8.53□□□□□ -1.04
TPM1-231ENST00000561395 TRIB2Q92519 343 aa8.53□□□□□ -1.04
TPM1-231ENST00000561395 CSRNP2Q9H175 543 aa8.53□□□□□ -1.04
TPM1-231ENST00000561395 RANBP17Q9H2T7 1088 aaKnown RBP8.53□□□□□ -1.04
TPM1-231ENST00000561395 TTYH1Q9H313 450 aaPredicted RBP8.53□□□□□ -1.04
TPM1-231ENST00000561395 PICK1Q9NRD5 415 aa8.53□□□□□ -1.04
TPM1-231ENST00000561395 TMEM260Q9NX78 707 aa8.53□□□□□ -1.04
TPM1-231ENST00000561395 LAD1O00515 517 aa8.52□□□□□ -1.05
TPM1-231ENST00000561395 PTPRAP18433 802 aa8.52□□□□□ -1.05
TPM1-231ENST00000561395 USP14P54578 494 aa8.52□□□□□ -1.05
TPM1-231ENST00000561395 TYRO3Q06418 890 aa8.52□□□□□ -1.05
TPM1-231ENST00000561395 TRAF1Q13077 416 aa8.52□□□□□ -1.05
TPM1-231ENST00000561395 MTMR2Q13614 643 aa8.52□□□□□ -1.05
TPM1-231ENST00000561395 MAP3K21Q5TCX8 1036 aa8.52□□□□□ -1.05
TPM1-231ENST00000561395 TEX2Q8IWB9 1127 aa8.52□□□□□ -1.05
TPM1-231ENST00000561395 CKAP2LQ8IYA6 745 aa8.52□□□□□ -1.05
TPM1-231ENST00000561395 USP38Q8NB14 1042 aa8.52□□□□□ -1.05
TPM1-231ENST00000561395 ZNF280CQ8ND82 737 aa8.52□□□□□ -1.05
TPM1-231ENST00000561395 TBCKQ8TEA7 893 aa8.52□□□□□ -1.05
TPM1-231ENST00000561395 KIFC2Q96AC6 838 aa8.52□□□□□ -1.05
TPM1-231ENST00000561395 TIGD1Q96MW7 591 aa8.52□□□□□ -1.05
TPM1-231ENST00000561395 RBSNQ9H1K0 784 aa8.52□□□□□ -1.05
TPM1-231ENST00000561395 PSTPIP2Q9H939 334 aa8.52□□□□□ -1.05
TPM1-231ENST00000561395 AS3MTQ9HBK9 375 aa8.52□□□□□ -1.05
TPM1-231ENST00000561395 EMILIN3Q9NT22 766 aa8.52□□□□□ -1.05
TPM1-231ENST00000561395 FBXO28Q9NVF7 368 aa8.52□□□□□ -1.05
TPM1-231ENST00000561395 FAM13BQ9NYF5 915 aa8.52□□□□□ -1.05
TPM1-231ENST00000561395 KCNH3Q9ULD8 1083 aa8.52□□□□□ -1.05
TPM1-231ENST00000561395 ZHX2Q9Y6X8 837 aa8.52□□□□□ -1.05
TPM1-231ENST00000561395 SMCHD1A6NHR9 2005 aa8.52□□□□□ -1.05
TPM1-231ENST00000561395 VWA3AA6NCI4 1184 aa8.51□□□□□ -1.05
TPM1-231ENST00000561395 OPLAHO14841 1288 aa8.51□□□□□ -1.05
TPM1-231ENST00000561395 NEMFO60524 1076 aa8.51□□□□□ -1.05
TPM1-231ENST00000561395 CCNT1O60563 726 aaKnown RBP8.51□□□□□ -1.05
TPM1-231ENST00000561395 CCDC192P0DO97 292 aa8.51□□□□□ -1.05
TPM1-231ENST00000561395 XRCC6P12956 609 aaKnown RBP eCLIP8.51□□□□□ -1.05
TPM1-231ENST00000561395 TAL1P17542 331 aaPredicted RBP8.51□□□□□ -1.05
TPM1-231ENST00000561395 VCAM1P19320 739 aa8.51□□□□□ -1.05
TPM1-231ENST00000561395 LONP1P36776 959 aaKnown RBP8.51□□□□□ -1.05
TPM1-231ENST00000561395 PRPHP41219 470 aa8.51□□□□□ -1.05
TPM1-231ENST00000561395 BACE1P56817 501 aa8.51□□□□□ -1.05
TPM1-231ENST00000561395 AP3B2Q13367 1082 aa8.51□□□□□ -1.05
TPM1-231ENST00000561395 IL17AQ16552 155 aa8.51□□□□□ -1.05
TPM1-231ENST00000561395 TMEM132AQ24JP5 1023 aa8.51□□□□□ -1.05
TPM1-231ENST00000561395 LETM2Q2VYF4 491 aa8.51□□□□□ -1.05
TPM1-231ENST00000561395 USH1GQ495M9 461 aa8.51□□□□□ -1.05
TPM1-231ENST00000561395 SPECC1Q5M775 1068 aa8.51□□□□□ -1.05
TPM1-231ENST00000561395 MCTP2Q6DN12 878 aa8.51□□□□□ -1.05
TPM1-231ENST00000561395 POTEHQ6S545 545 aa8.51□□□□□ -1.05
TPM1-231ENST00000561395 MS4A3Q96HJ5 214 aa8.51□□□□□ -1.05
TPM1-231ENST00000561395 C12orf42Q96LP6 360 aa8.51□□□□□ -1.05
TPM1-231ENST00000561395 SLF1Q9BQI6 1058 aa8.51□□□□□ -1.05
TPM1-231ENST00000561395 SDF4Q9BRK5 362 aa8.51□□□□□ -1.05
TPM1-231ENST00000561395 TMEM60Q9H2L4 133 aa8.51□□□□□ -1.05
TPM1-231ENST00000561395 RYDENQ9NUL5 291 aaKnown RBP8.51□□□□□ -1.05
TPM1-231ENST00000561395 GJD2Q9UKL4 321 aa8.51□□□□□ -1.05
TPM1-231ENST00000561395 PNMA3Q9UL41 463 aa8.51□□□□□ -1.05
TPM1-231ENST00000561395 AGTPBP1Q9UPW5 1226 aa8.51□□□□□ -1.05
TPM1-231ENST00000561395 AFG3L2Q9Y4W6 797 aa8.51□□□□□ -1.05
TPM1-231ENST00000561395 COL11A1P12107 1806 aaPredicted RBP8.51□□□□□ -1.05
TPM1-231ENST00000561395 A0A0G2JMZ2 1700 aa8.51□□□□□ -1.05
TPM1-231ENST00000561395 USP17L15C9J2P7 530 aa8.5□□□□□ -1.05
TPM1-231ENST00000561395 USP17L13C9JLJ4 530 aa8.5□□□□□ -1.05
TPM1-231ENST00000561395 USP17L11C9JVI0 530 aa8.5□□□□□ -1.05
TPM1-231ENST00000561395 USP17L18D6R9N7 530 aa8.5□□□□□ -1.05
TPM1-231ENST00000561395 USP17L22D6RA61 530 aa8.5□□□□□ -1.05
TPM1-231ENST00000561395 USP17L17D6RBQ6 530 aa8.5□□□□□ -1.05
TPM1-231ENST00000561395 USP17L19D6RCP7 530 aa8.5□□□□□ -1.05
TPM1-231ENST00000561395 USP17L20D6RJB6 530 aa8.5□□□□□ -1.05
TPM1-231ENST00000561395 PIK3CDO00329 1044 aa8.5□□□□□ -1.05
TPM1-231ENST00000561395 MEIS2O14770 477 aa8.5□□□□□ -1.05
TPM1-231ENST00000561395 ACTN4O43707 911 aaKnown RBP8.5□□□□□ -1.05
TPM1-231ENST00000561395 EDIL3O43854 480 aa8.5□□□□□ -1.05
TPM1-231ENST00000561395 OR52Z1P0C646 297 aa8.5□□□□□ -1.05
TPM1-231ENST00000561395 GCFC2P16383 781 aaKnown RBP8.5□□□□□ -1.05
TPM1-231ENST00000561395 SMAD3P84022 425 aaKnown RBP8.5□□□□□ -1.05
TPM1-231ENST00000561395 USP17L24Q0WX57 530 aa8.5□□□□□ -1.05
TPM1-231ENST00000561395 SPP2Q13103 211 aa8.5□□□□□ -1.05
TPM1-231ENST00000561395 SHHQ15465 462 aa8.5□□□□□ -1.05
TPM1-231ENST00000561395 C9orf50Q5SZB4 431 aa8.5□□□□□ -1.05
TPM1-231ENST00000561395 TREML2Q5T2D2 321 aa8.5□□□□□ -1.05
TPM1-231ENST00000561395 PPP4R3AQ6IN85 833 aa8.5□□□□□ -1.05
TPM1-231ENST00000561395 CCDC174Q6PII3 467 aa8.5□□□□□ -1.05
TPM1-231ENST00000561395 USP17L6PQ6QN14 398 aa8.5□□□□□ -1.05
TPM1-231ENST00000561395 SASS6Q6UVJ0 657 aa8.5□□□□□ -1.05
TPM1-231ENST00000561395 KRBA2Q6ZNG9 492 aa8.5□□□□□ -1.05
TPM1-231ENST00000561395 USP49Q70CQ1 688 aa8.5□□□□□ -1.05
TPM1-231ENST00000561395 ELOA2Q8IYF1 753 aaPredicted RBP8.5□□□□□ -1.05
TPM1-231ENST00000561395 PRPF38AQ8NAV1 312 aaKnown RBP8.5□□□□□ -1.05
TPM1-231ENST00000561395 ANO3Q9BYT9 981 aa8.5□□□□□ -1.05
TPM1-231ENST00000561395 TANGO6Q9C0B7 1094 aa8.5□□□□□ -1.05
TPM1-231ENST00000561395 RPAP3Q9H6T3 665 aaPredicted RBP8.5□□□□□ -1.05
TPM1-231ENST00000561395 TRPC6Q9Y210 931 aa8.5□□□□□ -1.05
TPM1-231ENST00000561395 REV3LO60673 3130 aa8.5□□□□□ -1.05
TPM1-231ENST00000561395 ABCB11O95342 1321 aa8.5□□□□□ -1.05
TPM1-231ENST00000561395 A0A087X0B3 334 aa8.49□□□□□ -1.05
TPM1-231ENST00000561395 C19orf81C9J6K1 198 aa8.49□□□□□ -1.05
TPM1-231ENST00000561395 POLR2DO15514 142 aaKnown RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms