RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 CHD9Q3L8U1 2897 aa19.81■□□□□ 0.76
CDC42BPB-208ENST00000561271 GRXCR1A8MXD5 290 aa19.81■□□□□ 0.76
CDC42BPB-208ENST00000561271 PIK3CDO00329 1044 aa19.81■□□□□ 0.76
CDC42BPB-208ENST00000561271 ZBTB43O43298 467 aa19.81■□□□□ 0.76
CDC42BPB-208ENST00000561271 F2P00734 622 aa19.81■□□□□ 0.76
CDC42BPB-208ENST00000561271 DNAJB2P25686 324 aa19.81■□□□□ 0.76
CDC42BPB-208ENST00000561271 PSEN2P49810 448 aa19.81■□□□□ 0.76
CDC42BPB-208ENST00000561271 RTN1Q16799 776 aa19.81■□□□□ 0.76
CDC42BPB-208ENST00000561271 HSDL1Q3SXM5 330 aa19.81■□□□□ 0.76
CDC42BPB-208ENST00000561271 GDF6Q6KF10 455 aaPredicted RBP19.81■□□□□ 0.76
CDC42BPB-208ENST00000561271 HEATR3Q7Z4Q2 680 aa19.81■□□□□ 0.76
CDC42BPB-208ENST00000561271 SPATA33Q96N06 139 aa19.81■□□□□ 0.76
CDC42BPB-208ENST00000561271 ALG1Q9BT22 464 aa19.81■□□□□ 0.76
CDC42BPB-208ENST00000561271 CXXC1Q9P0U4 656 aaPredicted RBP19.81■□□□□ 0.76
CDC42BPB-208ENST00000561271 KLF18A0A0U1RQI7 1052 aa19.8■□□□□ 0.76
CDC42BPB-208ENST00000561271 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.8■□□□□ 0.76
CDC42BPB-208ENST00000561271 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.8■□□□□ 0.76
CDC42BPB-208ENST00000561271 HOXD8P13378 290 aaPredicted RBP19.8■□□□□ 0.76
CDC42BPB-208ENST00000561271 SEMA3FQ13275 785 aa19.8■□□□□ 0.76
CDC42BPB-208ENST00000561271 MFSD10Q14728 455 aa19.8■□□□□ 0.76
CDC42BPB-208ENST00000561271 PTGISQ16647 500 aa19.8■□□□□ 0.76
CDC42BPB-208ENST00000561271 UBE2SQ16763 222 aa19.8■□□□□ 0.76
CDC42BPB-208ENST00000561271 GNPTABQ3T906 1256 aa19.8■□□□□ 0.76
CDC42BPB-208ENST00000561271 OTOP2Q7RTS6 562 aa19.8■□□□□ 0.76
CDC42BPB-208ENST00000561271 SESTD1Q86VW0 696 aa19.8■□□□□ 0.76
CDC42BPB-208ENST00000561271 HERVK_113Q902F9 699 aa19.8■□□□□ 0.76
CDC42BPB-208ENST00000561271 VWCEQ96DN2 955 aa19.8■□□□□ 0.76
CDC42BPB-208ENST00000561271 JAKMIP1Q96N16 626 aaKnown RBP19.8■□□□□ 0.76
CDC42BPB-208ENST00000561271 INPP4AQ96PE3 977 aaPredicted RBP19.8■□□□□ 0.76
CDC42BPB-208ENST00000561271 CTAGE1Q96RT6 745 aa19.8■□□□□ 0.76
CDC42BPB-208ENST00000561271 RBM28Q9NW13 759 aaKnown RBP19.8■□□□□ 0.76
CDC42BPB-208ENST00000561271 RTEL1Q9NZ71 1219 aa19.8■□□□□ 0.76
CDC42BPB-208ENST00000561271 COL4A4P53420 1690 aaPredicted RBP19.79■□□□□ 0.76
CDC42BPB-208ENST00000561271 GOLGA8AA7E2F4 631 aa19.79■□□□□ 0.76
CDC42BPB-208ENST00000561271 GOLGA8BA8MQT2 603 aa19.79■□□□□ 0.76
CDC42BPB-208ENST00000561271 FGBP02675 491 aa19.79■□□□□ 0.76
CDC42BPB-208ENST00000561271 HSPA4P34932 840 aa19.79■□□□□ 0.76
CDC42BPB-208ENST00000561271 KIAA0753Q2KHM9 967 aa19.79■□□□□ 0.76
CDC42BPB-208ENST00000561271 PCNX4Q63HM2 1172 aa19.79■□□□□ 0.76
CDC42BPB-208ENST00000561271 DEFB128Q7Z7B8 93 aa19.79■□□□□ 0.76
CDC42BPB-208ENST00000561271 KATNAL1Q9BW62 490 aa19.79■□□□□ 0.76
CDC42BPB-208ENST00000561271 SEMA6BQ9H3T3 888 aa19.79■□□□□ 0.76
CDC42BPB-208ENST00000561271 BCAS3Q9H6U6 928 aa19.79■□□□□ 0.76
CDC42BPB-208ENST00000561271 PSTPIP2Q9H939 334 aa19.79■□□□□ 0.76
CDC42BPB-208ENST00000561271 MLXIPQ9HAP2 919 aa19.79■□□□□ 0.76
CDC42BPB-208ENST00000561271 HDAC6Q9UBN7 1215 aa19.79■□□□□ 0.76
CDC42BPB-208ENST00000561271 NAP1L2Q9ULW6 460 aaPredicted RBP19.79■□□□□ 0.76
CDC42BPB-208ENST00000561271 SNX14Q9Y5W7 946 aa19.79■□□□□ 0.76
CDC42BPB-208ENST00000561271 PITPNM1O00562 1244 aa19.78■□□□□ 0.76
CDC42BPB-208ENST00000561271 STAM2O75886 525 aa19.78■□□□□ 0.76
CDC42BPB-208ENST00000561271 TGFB3P10600 412 aa19.78■□□□□ 0.76
CDC42BPB-208ENST00000561271 PBX2P40425 430 aa19.78■□□□□ 0.76
CDC42BPB-208ENST00000561271 FGD1P98174 961 aa19.78■□□□□ 0.76
CDC42BPB-208ENST00000561271 WWC2Q6AWC2 1192 aa19.78■□□□□ 0.76
CDC42BPB-208ENST00000561271 C7orf31Q8N865 590 aa19.78■□□□□ 0.76
CDC42BPB-208ENST00000561271 KCNB2Q92953 911 aa19.78■□□□□ 0.76
CDC42BPB-208ENST00000561271 CDX2Q99626 313 aaPredicted RBP19.78■□□□□ 0.76
CDC42BPB-208ENST00000561271 MTIF3Q9H2K0 278 aaKnown RBP19.78■□□□□ 0.76
CDC42BPB-208ENST00000561271 GTF2IRD1Q9UHL9 959 aa19.78■□□□□ 0.76
CDC42BPB-208ENST00000561271 EVPLQ92817 2033 aa19.78■□□□□ 0.76
CDC42BPB-208ENST00000561271 NLRC5Q86WI3 1866 aa19.77■□□□□ 0.76
CDC42BPB-208ENST00000561271 HAS3O00219 553 aa19.77■□□□□ 0.76
CDC42BPB-208ENST00000561271 FIBPO43427 364 aa19.77■□□□□ 0.76
CDC42BPB-208ENST00000561271 HMGB1P09429 215 aaKnown RBP19.77■□□□□ 0.76
CDC42BPB-208ENST00000561271 ICAM3P32942 547 aa19.77■□□□□ 0.76
CDC42BPB-208ENST00000561271 FUT2Q10981 343 aa19.77■□□□□ 0.76
CDC42BPB-208ENST00000561271 BFSP2Q13515 415 aa19.77■□□□□ 0.76
CDC42BPB-208ENST00000561271 TYW1BQ6NUM6 668 aa19.77■□□□□ 0.76
CDC42BPB-208ENST00000561271 RPUSD2Q8IZ73 545 aaKnown RBP19.77■□□□□ 0.76
CDC42BPB-208ENST00000561271 DHX38Q92620 1227 aaKnown RBP19.77■□□□□ 0.76
CDC42BPB-208ENST00000561271 PBX4Q9BYU1 374 aa19.77■□□□□ 0.76
CDC42BPB-208ENST00000561271 CHD7Q9P2D1 2997 aa19.77■□□□□ 0.76
CDC42BPB-208ENST00000561271 PRUNE2Q8WUY3 3088 aa19.77■□□□□ 0.75
CDC42BPB-208ENST00000561271 UNC80Q8N2C7 3258 aa19.77■□□□□ 0.75
CDC42BPB-208ENST00000561271 TMEM265A0A087WTH1 108 aa19.76■□□□□ 0.75
CDC42BPB-208ENST00000561271 ZBBXA8MT70 800 aa19.76■□□□□ 0.75
CDC42BPB-208ENST00000561271 SPATA31C2B4DYI2 1134 aa19.76■□□□□ 0.75
CDC42BPB-208ENST00000561271 REC8O95072 547 aa19.76■□□□□ 0.75
CDC42BPB-208ENST00000561271 IQCF3P0C7M6 154 aa19.76■□□□□ 0.75
CDC42BPB-208ENST00000561271 CDC27P30260 824 aa19.76■□□□□ 0.75
CDC42BPB-208ENST00000561271 NAPAP54920 295 aa19.76■□□□□ 0.75
CDC42BPB-208ENST00000561271 APOBRQ0VD83 1088 aa19.76■□□□□ 0.75
CDC42BPB-208ENST00000561271 Q6ZUG5 572 aa19.76■□□□□ 0.75
CDC42BPB-208ENST00000561271 CYFIP1Q7L576 1253 aa19.76■□□□□ 0.75
CDC42BPB-208ENST00000561271 RETREG2Q8NC44 543 aa19.76■□□□□ 0.75
CDC42BPB-208ENST00000561271 MYLIPQ8WY64 445 aa19.76■□□□□ 0.75
CDC42BPB-208ENST00000561271 TIFAQ96CG3 184 aa19.76■□□□□ 0.75
CDC42BPB-208ENST00000561271 C16orf70Q9BSU1 422 aa19.76■□□□□ 0.75
CDC42BPB-208ENST00000561271 FAM217BQ9NTX9 383 aaPredicted RBP19.76■□□□□ 0.75
CDC42BPB-208ENST00000561271 TELO2Q9Y4R8 837 aa19.76■□□□□ 0.75
CDC42BPB-208ENST00000561271 SPDYE3A6NKU9 549 aa19.75■□□□□ 0.75
CDC42BPB-208ENST00000561271 NOP56O00567 594 aaKnown RBP19.75■□□□□ 0.75
CDC42BPB-208ENST00000561271 PPFIA4O75335 1185 aa19.75■□□□□ 0.75
CDC42BPB-208ENST00000561271 LGALS2P05162 132 aa19.75■□□□□ 0.75
CDC42BPB-208ENST00000561271 PFKMP08237 780 aa19.75■□□□□ 0.75
CDC42BPB-208ENST00000561271 SP4Q02446 784 aa19.75■□□□□ 0.75
CDC42BPB-208ENST00000561271 NEDD9Q14511 834 aa19.75■□□□□ 0.75
CDC42BPB-208ENST00000561271 BLOC1S2Q6QNY1 142 aa19.75■□□□□ 0.75
CDC42BPB-208ENST00000561271 METTL7BQ6UX53 244 aa19.75■□□□□ 0.75
CDC42BPB-208ENST00000561271 CCDC155Q8N6L0 562 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms