RNA–Protein interactions for RNA: ENST00000561239.6

SHF-210, Transcript of Src homology 2 domain containing F, humanhuman

TSL 3

Gene SHF, Length 603 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-210ENST00000561239 CEP290O15078 2479 aa15.52■□□□□ 0.08
SHF-210ENST00000561239 ADAMTS3O15072 1205 aa15.52■□□□□ 0.08
SHF-210ENST00000561239 ST18O60284 1047 aa15.52■□□□□ 0.08
SHF-210ENST00000561239 MYL3P08590 195 aa15.52■□□□□ 0.08
SHF-210ENST00000561239 PURAQ00577 322 aaKnown RBP15.52■□□□□ 0.08
SHF-210ENST00000561239 AKAP17AQ02040 695 aaKnown RBP15.52■□□□□ 0.08
SHF-210ENST00000561239 FAAP100Q0VG06 881 aa15.52■□□□□ 0.08
SHF-210ENST00000561239 LAMC2Q13753 1193 aa15.52■□□□□ 0.08
SHF-210ENST00000561239 NPY5RQ15761 445 aa15.52■□□□□ 0.08
SHF-210ENST00000561239 TMEM63BQ5T3F8 832 aa15.52■□□□□ 0.08
SHF-210ENST00000561239 SLC43A3Q8NBI5 491 aa15.52■□□□□ 0.08
SHF-210ENST00000561239 IL31RAQ8NI17 732 aa15.52■□□□□ 0.08
SHF-210ENST00000561239 EMID1Q96A84 441 aaPredicted RBP15.52■□□□□ 0.08
SHF-210ENST00000561239 GLT8D2Q9H1C3 349 aa15.52■□□□□ 0.08
SHF-210ENST00000561239 EHMT1Q9H9B1 1298 aa15.52■□□□□ 0.08
SHF-210ENST00000561239 DDX41Q9UJV9 622 aaKnown RBP15.52■□□□□ 0.08
SHF-210ENST00000561239 TRIM43BA6NCK2 446 aa15.51■□□□□ 0.07
SHF-210ENST00000561239 SMCO2A6NFE2 343 aa15.51■□□□□ 0.07
SHF-210ENST00000561239 ARIH2O95376 493 aa15.51■□□□□ 0.07
SHF-210ENST00000561239 ADCY7P51828 1080 aa15.51■□□□□ 0.07
SHF-210ENST00000561239 UBE2SQ16763 222 aa15.51■□□□□ 0.07
SHF-210ENST00000561239 LY6KQ17RY6 165 aa15.51■□□□□ 0.07
SHF-210ENST00000561239 FAM126BQ8IXS8 530 aa15.51■□□□□ 0.07
SHF-210ENST00000561239 DHX37Q8IY37 1157 aaKnown RBP15.51■□□□□ 0.07
SHF-210ENST00000561239 CCDC12Q8WUD4 166 aaPredicted RBP15.51■□□□□ 0.07
SHF-210ENST00000561239 TRIM43Q96BQ3 446 aaPredicted RBP15.51■□□□□ 0.07
SHF-210ENST00000561239 AIFM3Q96NN9 605 aa15.51■□□□□ 0.07
SHF-210ENST00000561239 SPDYE3A6NKU9 549 aa15.5■□□□□ 0.07
SHF-210ENST00000561239 RGS20O76081 388 aa15.5■□□□□ 0.07
SHF-210ENST00000561239 TIMP1P01033 207 aa15.5■□□□□ 0.07
SHF-210ENST00000561239 SUPT20HL2P0C7V6 817 aa15.5■□□□□ 0.07
SHF-210ENST00000561239 PTGS1P23219 599 aa15.5■□□□□ 0.07
SHF-210ENST00000561239 MCM2P49736 904 aa15.5■□□□□ 0.07
SHF-210ENST00000561239 FXR1P51114 621 aaKnown RBP eCLIP15.5■□□□□ 0.07
SHF-210ENST00000561239 MRPS9P82933 396 aaKnown RBP15.5■□□□□ 0.07
SHF-210ENST00000561239 DGKDQ16760 1214 aa15.5■□□□□ 0.07
SHF-210ENST00000561239 SH3RF1Q7Z6J0 888 aa15.5■□□□□ 0.07
SHF-210ENST00000561239 CCDC148Q8NFR7 591 aa15.5■□□□□ 0.07
SHF-210ENST00000561239 CRYGNQ8WXF5 182 aa15.5■□□□□ 0.07
SHF-210ENST00000561239 COPS5Q92905 334 aa15.5■□□□□ 0.07
SHF-210ENST00000561239 BADQ92934 168 aa15.5■□□□□ 0.07
SHF-210ENST00000561239 LLPHQ9BRT6 129 aaKnown RBP15.5■□□□□ 0.07
SHF-210ENST00000561239 VPS54Q9P1Q0 977 aa15.5■□□□□ 0.07
SHF-210ENST00000561239 M0R2N6 131 aa15.49■□□□□ 0.07
SHF-210ENST00000561239 JAK2O60674 1132 aa15.49■□□□□ 0.07
SHF-210ENST00000561239 DTNBO60941 627 aa15.49■□□□□ 0.07
SHF-210ENST00000561239 FOSP01100 380 aaPredicted RBP15.49■□□□□ 0.07
SHF-210ENST00000561239 CD4P01730 458 aa15.49■□□□□ 0.07
SHF-210ENST00000561239 PTPN11Q06124 597 aaPredicted RBP15.49■□□□□ 0.07
SHF-210ENST00000561239 ARHGAP1Q07960 439 aa15.49■□□□□ 0.07
SHF-210ENST00000561239 AP3B2Q13367 1082 aa15.49■□□□□ 0.07
SHF-210ENST00000561239 NEDD9Q14511 834 aa15.49■□□□□ 0.07
SHF-210ENST00000561239 LRIT3Q3SXY7 679 aa15.49■□□□□ 0.07
SHF-210ENST00000561239 PCNX4Q63HM2 1172 aa15.49■□□□□ 0.07
SHF-210ENST00000561239 NFRKBQ6P4R8 1299 aa15.49■□□□□ 0.07
SHF-210ENST00000561239 NLRX1Q86UT6 975 aa15.49■□□□□ 0.07
SHF-210ENST00000561239 DAGLBQ8NCG7 672 aa15.49■□□□□ 0.07
SHF-210ENST00000561239 PPTC7Q8NI37 304 aa15.49■□□□□ 0.07
SHF-210ENST00000561239 AFG1LQ8WV93 481 aa15.49■□□□□ 0.07
SHF-210ENST00000561239 CDHR1Q96JP9 859 aa15.49■□□□□ 0.07
SHF-210ENST00000561239 KATNAL1Q9BW62 490 aa15.49■□□□□ 0.07
SHF-210ENST00000561239 ORC3Q9UBD5 711 aaPredicted RBP15.49■□□□□ 0.07
SHF-210ENST00000561239 TBX21Q9UL17 535 aa15.49■□□□□ 0.07
SHF-210ENST00000561239 PCDHA6Q9UN73 950 aa15.49■□□□□ 0.07
SHF-210ENST00000561239 PCDHA8Q9Y5H6 950 aa15.49■□□□□ 0.07
SHF-210ENST00000561239 FIBPO43427 364 aa15.48■□□□□ 0.07
SHF-210ENST00000561239 SLC34A2O95436 690 aa15.48■□□□□ 0.07
SHF-210ENST00000561239 MMP3P08254 477 aa15.48■□□□□ 0.07
SHF-210ENST00000561239 GNA11P29992 359 aa15.48■□□□□ 0.07
SHF-210ENST00000561239 ICAM3P32942 547 aa15.48■□□□□ 0.07
SHF-210ENST00000561239 PSMC6P62333 389 aa15.48■□□□□ 0.07
SHF-210ENST00000561239 CELF3Q5SZQ8 465 aaKnown RBP15.48■□□□□ 0.07
SHF-210ENST00000561239 MCTP2Q6DN12 878 aa15.48■□□□□ 0.07
SHF-210ENST00000561239 CCDC83Q8IWF9 413 aa15.48■□□□□ 0.07
SHF-210ENST00000561239 TMEM199Q8N511 208 aa15.48■□□□□ 0.07
SHF-210ENST00000561239 GIMAP8Q8ND71 665 aaPredicted RBP15.48■□□□□ 0.07
SHF-210ENST00000561239 TMX3Q96JJ7 454 aa15.48■□□□□ 0.07
SHF-210ENST00000561239 INPP4AQ96PE3 977 aaPredicted RBP15.48■□□□□ 0.07
SHF-210ENST00000561239 PHF20Q9BVI0 1012 aa15.48■□□□□ 0.07
SHF-210ENST00000561239 MLXIPQ9HAP2 919 aa15.48■□□□□ 0.07
SHF-210ENST00000561239 C6orf50Q9HD87 102 aa15.48■□□□□ 0.07
SHF-210ENST00000561239 KIAA1217Q5T5P2 1943 aa15.48■□□□□ 0.07
SHF-210ENST00000561239 GRIN2DO15399 1336 aa15.47■□□□□ 0.07
SHF-210ENST00000561239 SPATA31C2B4DYI2 1134 aa15.47■□□□□ 0.07
SHF-210ENST00000561239 PPFIA4O75335 1185 aa15.47■□□□□ 0.07
SHF-210ENST00000561239 SREBF1P36956 1147 aa15.47■□□□□ 0.07
SHF-210ENST00000561239 FPGSQ05932 587 aa15.47■□□□□ 0.07
SHF-210ENST00000561239 FAM47CQ5HY64 1035 aa15.47■□□□□ 0.07
SHF-210ENST00000561239 MYSM1Q5VVJ2 828 aa15.47■□□□□ 0.07
SHF-210ENST00000561239 GALNT17Q6IS24 598 aa15.47■□□□□ 0.07
SHF-210ENST00000561239 MFSD5Q6N075 450 aa15.47■□□□□ 0.07
SHF-210ENST00000561239 WASF1Q92558 559 aa15.47■□□□□ 0.07
SHF-210ENST00000561239 ANO3Q9BYT9 981 aa15.47■□□□□ 0.07
SHF-210ENST00000561239 TMEM260Q9NX78 707 aa15.47■□□□□ 0.07
SHF-210ENST00000561239 PCDHA4Q9UN74 947 aa15.47■□□□□ 0.07
SHF-210ENST00000561239 MAFGO15525 162 aa15.46■□□□□ 0.07
SHF-210ENST00000561239 EDIL3O43854 480 aa15.46■□□□□ 0.07
SHF-210ENST00000561239 GGPS1O95749 300 aa15.46■□□□□ 0.07
SHF-210ENST00000561239 PPIGQ13427 754 aaKnown RBP eCLIP15.46■□□□□ 0.07
SHF-210ENST00000561239 NBPF20Q3BBV1 942 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms