RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 EXOSC10Q01780 885 aaKnown RBP18.42■□□□□ 0.54
LMX1B-204ENST00000561065 LAMC2Q13753 1193 aa18.42■□□□□ 0.54
LMX1B-204ENST00000561065 DGKDQ16760 1214 aa18.42■□□□□ 0.54
LMX1B-204ENST00000561065 CELF3Q5SZQ8 465 aaKnown RBP18.42■□□□□ 0.54
LMX1B-204ENST00000561065 APOA5Q6Q788 366 aa18.42■□□□□ 0.54
LMX1B-204ENST00000561065 DHX37Q8IY37 1157 aaKnown RBP18.42■□□□□ 0.54
LMX1B-204ENST00000561065 MYLIPQ8WY64 445 aa18.42■□□□□ 0.54
LMX1B-204ENST00000561065 DHX38Q92620 1227 aaKnown RBP18.42■□□□□ 0.54
LMX1B-204ENST00000561065 INPP4AQ96PE3 977 aaPredicted RBP18.42■□□□□ 0.54
LMX1B-204ENST00000561065 NEK1Q96PY6 1258 aa18.42■□□□□ 0.54
LMX1B-204ENST00000561065 LZTS2Q9BRK4 669 aa18.42■□□□□ 0.54
LMX1B-204ENST00000561065 SEC63Q9UGP8 760 aaKnown RBP18.42■□□□□ 0.54
LMX1B-204ENST00000561065 BRPF3Q9ULD4 1205 aa18.42■□□□□ 0.54
LMX1B-204ENST00000561065 SLC12A7Q9Y666 1083 aa18.42■□□□□ 0.54
LMX1B-204ENST00000561065 PIK3CDO00329 1044 aa18.41■□□□□ 0.54
LMX1B-204ENST00000561065 HMGB1P09429 215 aaKnown RBP18.41■□□□□ 0.54
LMX1B-204ENST00000561065 CALM1P0DP23 149 aa18.41■□□□□ 0.54
LMX1B-204ENST00000561065 CALM2P0DP24 149 aa18.41■□□□□ 0.54
LMX1B-204ENST00000561065 CALM3P0DP25 149 aa18.41■□□□□ 0.54
LMX1B-204ENST00000561065 CASTP20810 708 aaKnown RBP18.41■□□□□ 0.54
LMX1B-204ENST00000561065 PSEN2P49810 448 aa18.41■□□□□ 0.54
LMX1B-204ENST00000561065 GNAQP50148 359 aa18.41■□□□□ 0.54
LMX1B-204ENST00000561065 HIC1Q14526 733 aa18.41■□□□□ 0.54
LMX1B-204ENST00000561065 TSGA10IPQ3SY00 556 aa18.41■□□□□ 0.54
LMX1B-204ENST00000561065 SYNE3Q6ZMZ3 975 aa18.41■□□□□ 0.54
LMX1B-204ENST00000561065 CCDC82Q8N4S0 544 aa18.41■□□□□ 0.54
LMX1B-204ENST00000561065 FANCBQ8NB91 859 aa18.41■□□□□ 0.54
LMX1B-204ENST00000561065 GTF2IRD1Q9UHL9 959 aa18.41■□□□□ 0.54
LMX1B-204ENST00000561065 TELO2Q9Y4R8 837 aa18.41■□□□□ 0.54
LMX1B-204ENST00000561065 VCANP13611 3396 aa18.4■□□□□ 0.54
LMX1B-204ENST00000561065 PITPNM1O00562 1244 aa18.4■□□□□ 0.54
LMX1B-204ENST00000561065 FGBP02675 491 aa18.4■□□□□ 0.54
LMX1B-204ENST00000561065 MFSD10Q14728 455 aa18.4■□□□□ 0.54
LMX1B-204ENST00000561065 GRIN2CQ14957 1233 aa18.4■□□□□ 0.54
LMX1B-204ENST00000561065 PTGISQ16647 500 aa18.4■□□□□ 0.54
LMX1B-204ENST00000561065 DEFB128Q7Z7B8 93 aa18.4■□□□□ 0.54
LMX1B-204ENST00000561065 WNT8BQ93098 351 aa18.4■□□□□ 0.54
LMX1B-204ENST00000561065 TIFAQ96CG3 184 aa18.4■□□□□ 0.54
LMX1B-204ENST00000561065 SPATA33Q96N06 139 aa18.4■□□□□ 0.54
LMX1B-204ENST00000561065 HDAC6Q9UBN7 1215 aa18.4■□□□□ 0.54
LMX1B-204ENST00000561065 EPB41L2O43491 1005 aaKnown RBP18.39■□□□□ 0.53
LMX1B-204ENST00000561065 IQCF3P0C7M6 154 aa18.39■□□□□ 0.53
LMX1B-204ENST00000561065 CPA1P15085 419 aa18.39■□□□□ 0.53
LMX1B-204ENST00000561065 ICAM3P32942 547 aa18.39■□□□□ 0.53
LMX1B-204ENST00000561065 FUT2Q10981 343 aa18.39■□□□□ 0.53
LMX1B-204ENST00000561065 GPNMBQ14956 572 aa18.39■□□□□ 0.53
LMX1B-204ENST00000561065 UBE2SQ16763 222 aa18.39■□□□□ 0.53
LMX1B-204ENST00000561065 KIAA0753Q2KHM9 967 aa18.39■□□□□ 0.53
LMX1B-204ENST00000561065 TYW1BQ6NUM6 668 aa18.39■□□□□ 0.53
LMX1B-204ENST00000561065 KCNV1Q6PIU1 500 aa18.39■□□□□ 0.53
LMX1B-204ENST00000561065 SLC17A8Q8NDX2 589 aa18.39■□□□□ 0.53
LMX1B-204ENST00000561065 SMARCC2Q8TAQ2 1214 aa18.39■□□□□ 0.53
LMX1B-204ENST00000561065 C16orf70Q9BSU1 422 aa18.39■□□□□ 0.53
LMX1B-204ENST00000561065 ALG1Q9BT22 464 aa18.39■□□□□ 0.53
LMX1B-204ENST00000561065 RTEL1Q9NZ71 1219 aa18.39■□□□□ 0.53
LMX1B-204ENST00000561065 YBX2Q9Y2T7 364 aaKnown RBP18.39■□□□□ 0.53
LMX1B-204ENST00000561065 TGFB3P10600 412 aa18.38■□□□□ 0.53
LMX1B-204ENST00000561065 PCNX4Q63HM2 1172 aa18.38■□□□□ 0.53
LMX1B-204ENST00000561065 WWC2Q6AWC2 1192 aa18.38■□□□□ 0.53
LMX1B-204ENST00000561065 DHX32Q7L7V1 743 aaKnown RBP18.38■□□□□ 0.53
LMX1B-204ENST00000561065 KCNB2Q92953 911 aa18.38■□□□□ 0.53
LMX1B-204ENST00000561065 ZNF576Q9H609 170 aa18.38■□□□□ 0.53
LMX1B-204ENST00000561065 NOD1Q9Y239 953 aa18.38■□□□□ 0.53
LMX1B-204ENST00000561065 SPTBN5Q9NRC6 3674 aaKnown RBP18.37■□□□□ 0.53
LMX1B-204ENST00000561065 MYO9BQ13459 2157 aa18.37■□□□□ 0.53
LMX1B-204ENST00000561065 REV3LO60673 3130 aa18.37■□□□□ 0.53
LMX1B-204ENST00000561065 SPATA31C2B4DYI2 1134 aa18.37■□□□□ 0.53
LMX1B-204ENST00000561065 PFKMP08237 780 aa18.37■□□□□ 0.53
LMX1B-204ENST00000561065 RABGGTBP53611 331 aa18.37■□□□□ 0.53
LMX1B-204ENST00000561065 ZNF200P98182 395 aaPredicted RBP18.37■□□□□ 0.53
LMX1B-204ENST00000561065 RBL2Q08999 1139 aa18.37■□□□□ 0.53
LMX1B-204ENST00000561065 RPUSD2Q8IZ73 545 aaKnown RBP18.37■□□□□ 0.53
LMX1B-204ENST00000561065 KATNAL1Q9BW62 490 aa18.37■□□□□ 0.53
LMX1B-204ENST00000561065 FAM217BQ9NTX9 383 aaPredicted RBP18.37■□□□□ 0.53
LMX1B-204ENST00000561065 SIP14410 1827 aa18.37■□□□□ 0.53
LMX1B-204ENST00000561065 FIBPO43427 364 aa18.36■□□□□ 0.53
LMX1B-204ENST00000561065 STAM2O75886 525 aa18.36■□□□□ 0.53
LMX1B-204ENST00000561065 LGALS2P05162 132 aa18.36■□□□□ 0.53
LMX1B-204ENST00000561065 CDC27P30260 824 aa18.36■□□□□ 0.53
LMX1B-204ENST00000561065 FGD1P98174 961 aa18.36■□□□□ 0.53
LMX1B-204ENST00000561065 BFSP2Q13515 415 aa18.36■□□□□ 0.53
LMX1B-204ENST00000561065 RTN1Q16799 776 aa18.36■□□□□ 0.53
LMX1B-204ENST00000561065 TRIM71Q2Q1W2 868 aaKnown RBP18.36■□□□□ 0.53
LMX1B-204ENST00000561065 GNPTABQ3T906 1256 aa18.36■□□□□ 0.53
LMX1B-204ENST00000561065 TRAF7Q6Q0C0 670 aa18.36■□□□□ 0.53
LMX1B-204ENST00000561065 HEATR3Q7Z4Q2 680 aa18.36■□□□□ 0.53
LMX1B-204ENST00000561065 TRIM50Q86XT4 487 aa18.36■□□□□ 0.53
LMX1B-204ENST00000561065 C7orf31Q8N865 590 aa18.36■□□□□ 0.53
LMX1B-204ENST00000561065 CAGE1Q8TC20 777 aa18.36■□□□□ 0.53
LMX1B-204ENST00000561065 CUL5Q93034 780 aa18.36■□□□□ 0.53
LMX1B-204ENST00000561065 MTIF3Q9H2K0 278 aaKnown RBP18.36■□□□□ 0.53
LMX1B-204ENST00000561065 PSTPIP2Q9H939 334 aa18.36■□□□□ 0.53
LMX1B-204ENST00000561065 MLXIPQ9HAP2 919 aa18.36■□□□□ 0.53
LMX1B-204ENST00000561065 KLF18A0A0U1RQI7 1052 aa18.35■□□□□ 0.53
LMX1B-204ENST00000561065 ZBBXA8MT70 800 aa18.35■□□□□ 0.53
LMX1B-204ENST00000561065 ZBTB43O43298 467 aa18.35■□□□□ 0.53
LMX1B-204ENST00000561065 PPFIA4O75335 1185 aa18.35■□□□□ 0.53
LMX1B-204ENST00000561065 MYOGP15173 224 aa18.35■□□□□ 0.53
LMX1B-204ENST00000561065 FOSL2P15408 326 aa18.35■□□□□ 0.53
LMX1B-204ENST00000561065 HSPA4P34932 840 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms