RNA–Protein interactions for RNA: ENST00000560658.5

TRPM1-211, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 2

Gene TRPM1, Length 1,649 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-211ENST00000560658 DDX25Q9UHL0 483 aaKnown RBP19.58■□□□□ 0.73
TRPM1-211ENST00000560658 ATP8B3O60423 1300 aa19.58■□□□□ 0.72
TRPM1-211ENST00000560658 SLC37A4O43826 429 aa19.58■□□□□ 0.72
TRPM1-211ENST00000560658 ASTE1Q2TB18 679 aaPredicted RBP19.58■□□□□ 0.72
TRPM1-211ENST00000560658 FAM26FQ5R3K3 315 aa19.58■□□□□ 0.72
TRPM1-211ENST00000560658 C10orf76Q5T2E6 689 aa19.58■□□□□ 0.72
TRPM1-211ENST00000560658 ZC3H3Q8IXZ2 948 aaKnown RBP19.58■□□□□ 0.72
TRPM1-211ENST00000560658 TBC1D16Q8TBP0 767 aa19.58■□□□□ 0.72
TRPM1-211ENST00000560658 DAGLAQ9Y4D2 1042 aa19.58■□□□□ 0.72
TRPM1-211ENST00000560658 PITPNM2Q9BZ72 1349 aa19.57■□□□□ 0.72
TRPM1-211ENST00000560658 LRRC53A6NM62 1247 aa19.57■□□□□ 0.72
TRPM1-211ENST00000560658 ZNF263O14978 683 aa19.57■□□□□ 0.72
TRPM1-211ENST00000560658 ZBTB5O15062 677 aa19.57■□□□□ 0.72
TRPM1-211ENST00000560658 MARCH6O60337 910 aa19.57■□□□□ 0.72
TRPM1-211ENST00000560658 TDP2O95551 362 aa19.57■□□□□ 0.72
TRPM1-211ENST00000560658 ANXA13P27216 316 aa19.57■□□□□ 0.72
TRPM1-211ENST00000560658 CYP27A1Q02318 531 aa19.57■□□□□ 0.72
TRPM1-211ENST00000560658 COASYQ13057 564 aa19.57■□□□□ 0.72
TRPM1-211ENST00000560658 EDRF1Q3B7T1 1238 aa19.57■□□□□ 0.72
TRPM1-211ENST00000560658 CCDC181Q5TID7 509 aa19.57■□□□□ 0.72
TRPM1-211ENST00000560658 EMBQ6PCB8 327 aa19.57■□□□□ 0.72
TRPM1-211ENST00000560658 RRAGAQ7L523 313 aa19.57■□□□□ 0.72
TRPM1-211ENST00000560658 AENQ8WTP8 325 aaKnown RBP19.57■□□□□ 0.72
TRPM1-211ENST00000560658 NGLY1Q96IV0 654 aa19.57■□□□□ 0.72
TRPM1-211ENST00000560658 CAPZA3Q96KX2 299 aa19.57■□□□□ 0.72
TRPM1-211ENST00000560658 OSBPL9Q96SU4 736 aa19.57■□□□□ 0.72
TRPM1-211ENST00000560658 EHD4Q9H223 541 aa19.57■□□□□ 0.72
TRPM1-211ENST00000560658 CPVLQ9H3G5 476 aa19.57■□□□□ 0.72
TRPM1-211ENST00000560658 QTRT2Q9H974 415 aaKnown RBP19.57■□□□□ 0.72
TRPM1-211ENST00000560658 JMJD4Q9H9V9 463 aa19.57■□□□□ 0.72
TRPM1-211ENST00000560658 QSER1Q2KHR3 1735 aa19.57■□□□□ 0.72
TRPM1-211ENST00000560658 LRRC37AA6NMS7 1700 aa19.56■□□□□ 0.72
TRPM1-211ENST00000560658 KLRG2A4D1S0 409 aaPredicted RBP19.56■□□□□ 0.72
TRPM1-211ENST00000560658 SRGAP2O75044 1071 aa19.56■□□□□ 0.72
TRPM1-211ENST00000560658 RNF40O75150 1001 aa19.56■□□□□ 0.72
TRPM1-211ENST00000560658 TFRCP02786 760 aaKnown RBP19.56■□□□□ 0.72
TRPM1-211ENST00000560658 HLA-DOAP06340 250 aa19.56■□□□□ 0.72
TRPM1-211ENST00000560658 TNNI2P48788 182 aa19.56■□□□□ 0.72
TRPM1-211ENST00000560658 CCDC40Q4G0X9 1142 aa19.56■□□□□ 0.72
TRPM1-211ENST00000560658 SFMBT2Q5VUG0 894 aa19.56■□□□□ 0.72
TRPM1-211ENST00000560658 SLFN12Q8IYM2 578 aa19.56■□□□□ 0.72
TRPM1-211ENST00000560658 DNAJC19Q96DA6 116 aa19.56■□□□□ 0.72
TRPM1-211ENST00000560658 SUGCTQ9HAC7 445 aa19.56■□□□□ 0.72
TRPM1-211ENST00000560658 FAM207AQ9NSI2 230 aaPredicted RBP19.56■□□□□ 0.72
TRPM1-211ENST00000560658 PANK4Q9NVE7 773 aa19.56■□□□□ 0.72
TRPM1-211ENST00000560658 SERPINB13Q9UIV8 391 aa19.56■□□□□ 0.72
TRPM1-211ENST00000560658 PCDHA12Q9UN75 941 aa19.56■□□□□ 0.72
TRPM1-211ENST00000560658 CYP3A7-CYP3A51PA0A087WV96 503 aa19.55■□□□□ 0.72
TRPM1-211ENST00000560658 GRID2IPA4D2P6 1211 aa19.55■□□□□ 0.72
TRPM1-211ENST00000560658 OPA1O60313 960 aa19.55■□□□□ 0.72
TRPM1-211ENST00000560658 CYP3A7P24462 503 aa19.55■□□□□ 0.72
TRPM1-211ENST00000560658 EPHB4P54760 987 aa19.55■□□□□ 0.72
TRPM1-211ENST00000560658 AP3B2Q13367 1082 aa19.55■□□□□ 0.72
TRPM1-211ENST00000560658 ALS2CLQ60I27 953 aa19.55■□□□□ 0.72
TRPM1-211ENST00000560658 GBP6Q6ZN66 633 aa19.55■□□□□ 0.72
TRPM1-211ENST00000560658 DYMQ7RTS9 669 aa19.55■□□□□ 0.72
TRPM1-211ENST00000560658 SP8Q8IXZ3 490 aa19.55■□□□□ 0.72
TRPM1-211ENST00000560658 SPATA4Q8NEY3 305 aa19.55■□□□□ 0.72
TRPM1-211ENST00000560658 COA7Q96BR5 231 aa19.55■□□□□ 0.72
TRPM1-211ENST00000560658 MBOAT7Q96N66 472 aa19.55■□□□□ 0.72
TRPM1-211ENST00000560658 SELENOOQ9BVL4 669 aa19.55■□□□□ 0.72
TRPM1-211ENST00000560658 ATF5Q9Y2D1 282 aaPredicted RBP19.55■□□□□ 0.72
TRPM1-211ENST00000560658 FRMPD2Q68DX3 1309 aaPredicted RBP19.55■□□□□ 0.72
TRPM1-211ENST00000560658 BTNL10A8MVZ5 291 aa19.54■□□□□ 0.72
TRPM1-211ENST00000560658 GOLGA8KD6RF30 607 aa19.54■□□□□ 0.72
TRPM1-211ENST00000560658 CES2O00748 559 aa19.54■□□□□ 0.72
TRPM1-211ENST00000560658 TBX3O15119 743 aa19.54■□□□□ 0.72
TRPM1-211ENST00000560658 PRPF6O94906 941 aaKnown RBP19.54■□□□□ 0.72
TRPM1-211ENST00000560658 SYF2O95926 243 aaKnown RBP19.54■□□□□ 0.72
TRPM1-211ENST00000560658 APBA1Q02410 837 aa19.54■□□□□ 0.72
TRPM1-211ENST00000560658 CFAP221Q4G0U5 840 aa19.54■□□□□ 0.72
TRPM1-211ENST00000560658 HAUS3Q68CZ6 603 aa19.54■□□□□ 0.72
TRPM1-211ENST00000560658 FAM196AQ6ZSG2 479 aa19.54■□□□□ 0.72
TRPM1-211ENST00000560658 SMIM5Q71RC9 77 aa19.54■□□□□ 0.72
TRPM1-211ENST00000560658 ADGRF4Q8IZF3 695 aa19.54■□□□□ 0.72
TRPM1-211ENST00000560658 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.54■□□□□ 0.72
TRPM1-211ENST00000560658 FAM204AQ9H8W3 233 aa19.54■□□□□ 0.72
TRPM1-211ENST00000560658 PSTPIP2Q9H939 334 aa19.54■□□□□ 0.72
TRPM1-211ENST00000560658 POTEMA6NI47 508 aa19.54■□□□□ 0.72
TRPM1-211ENST00000560658 PDE2AO00408 941 aaPredicted RBP19.54■□□□□ 0.72
TRPM1-211ENST00000560658 TRAF5O00463 557 aa19.54■□□□□ 0.72
TRPM1-211ENST00000560658 EDIL3O43854 480 aa19.54■□□□□ 0.72
TRPM1-211ENST00000560658 SERPINB2P05120 415 aa19.54■□□□□ 0.72
TRPM1-211ENST00000560658 AKR1B1P15121 316 aa19.54■□□□□ 0.72
TRPM1-211ENST00000560658 RAD51AP2Q09MP3 1159 aa19.54■□□□□ 0.72
TRPM1-211ENST00000560658 DPP8Q6V1X1 898 aaPredicted RBP19.54■□□□□ 0.72
TRPM1-211ENST00000560658 TRIM59Q8IWR1 403 aa19.54■□□□□ 0.72
TRPM1-211ENST00000560658 DCAF4Q8WV16 495 aa19.54■□□□□ 0.72
TRPM1-211ENST00000560658 CAVIN3Q969G5 261 aa19.54■□□□□ 0.72
TRPM1-211ENST00000560658 MXD3Q9BW11 206 aa19.54■□□□□ 0.72
TRPM1-211ENST00000560658 TANGO6Q9C0B7 1094 aa19.54■□□□□ 0.72
TRPM1-211ENST00000560658 BZW2Q9Y6E2 419 aaKnown RBP19.54■□□□□ 0.72
TRPM1-211ENST00000560658 FRMD3A2A2Y4 597 aa19.53■□□□□ 0.72
TRPM1-211ENST00000560658 N4BP1O75113 896 aaKnown RBP19.53■□□□□ 0.72
TRPM1-211ENST00000560658 IFI16Q16666 785 aaKnown RBP19.53■□□□□ 0.72
TRPM1-211ENST00000560658 HHIPL2Q6UWX4 724 aa19.53■□□□□ 0.72
TRPM1-211ENST00000560658 KRT26Q7Z3Y9 468 aa19.53■□□□□ 0.72
TRPM1-211ENST00000560658 ERMNQ8TAM6 284 aa19.53■□□□□ 0.72
TRPM1-211ENST00000560658 HAS1Q92839 578 aa19.53■□□□□ 0.72
TRPM1-211ENST00000560658 FAM107BQ9H098 131 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms