RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 LMCD1Q9NZU5 365 aa12.26□□□□□ -0.45
CDC42BPB-207ENST00000560492 GTF2IRD1Q9UHL9 959 aa12.26□□□□□ -0.45
CDC42BPB-207ENST00000560492 LAMA4Q16363 1823 aa12.25□□□□□ -0.45
CDC42BPB-207ENST00000560492 LINC01553A4QN01 128 aa12.25□□□□□ -0.45
CDC42BPB-207ENST00000560492 NBNO60934 754 aa12.25□□□□□ -0.45
CDC42BPB-207ENST00000560492 CFBP00751 764 aa12.25□□□□□ -0.45
CDC42BPB-207ENST00000560492 AMHP03971 560 aa12.25□□□□□ -0.45
CDC42BPB-207ENST00000560492 MYCLP12524 364 aaPredicted RBP12.25□□□□□ -0.45
CDC42BPB-207ENST00000560492 ZNF618Q5T7W0 954 aa12.25□□□□□ -0.45
CDC42BPB-207ENST00000560492 CCDC62Q6P9F0 684 aa12.25□□□□□ -0.45
CDC42BPB-207ENST00000560492 IQCA1Q86XH1 822 aa12.25□□□□□ -0.45
CDC42BPB-207ENST00000560492 PNMA1Q8ND90 353 aa12.25□□□□□ -0.45
CDC42BPB-207ENST00000560492 SYTL5Q8TDW5 730 aaPredicted RBP12.25□□□□□ -0.45
CDC42BPB-207ENST00000560492 TBC1D5Q92609 795 aa12.25□□□□□ -0.45
CDC42BPB-207ENST00000560492 RILPL2Q969X0 211 aa12.25□□□□□ -0.45
CDC42BPB-207ENST00000560492 GPR37L1O60883 481 aa12.24□□□□□ -0.45
CDC42BPB-207ENST00000560492 FGRP09769 529 aa12.24□□□□□ -0.45
CDC42BPB-207ENST00000560492 HSPD1P10809 573 aaKnown RBP12.24□□□□□ -0.45
CDC42BPB-207ENST00000560492 THPOP40225 353 aa12.24□□□□□ -0.45
CDC42BPB-207ENST00000560492 ERVK-21P61565 698 aa12.24□□□□□ -0.45
CDC42BPB-207ENST00000560492 NMIQ13287 307 aaPredicted RBP12.24□□□□□ -0.45
CDC42BPB-207ENST00000560492 PTK7Q13308 1070 aa12.24□□□□□ -0.45
CDC42BPB-207ENST00000560492 GSE1Q14687 1217 aa12.24□□□□□ -0.45
CDC42BPB-207ENST00000560492 PTCRAQ6ISU1 281 aaPredicted RBP12.24□□□□□ -0.45
CDC42BPB-207ENST00000560492 CCDC171Q6TFL3 1326 aa12.24□□□□□ -0.45
CDC42BPB-207ENST00000560492 SESTD1Q86VW0 696 aa12.24□□□□□ -0.45
CDC42BPB-207ENST00000560492 FBXO11Q86XK2 927 aa12.24□□□□□ -0.45
CDC42BPB-207ENST00000560492 TBC1D10CQ8IV04 446 aa12.24□□□□□ -0.45
CDC42BPB-207ENST00000560492 ADGRF4Q8IZF3 695 aa12.24□□□□□ -0.45
CDC42BPB-207ENST00000560492 GJD3Q8N144 294 aa12.24□□□□□ -0.45
CDC42BPB-207ENST00000560492 RGS22Q8NE09 1264 aa12.24□□□□□ -0.45
CDC42BPB-207ENST00000560492 KAT2BQ92831 832 aa12.24□□□□□ -0.45
CDC42BPB-207ENST00000560492 IWS1Q96ST2 819 aa12.24□□□□□ -0.45
CDC42BPB-207ENST00000560492 C17orf80Q9BSJ5 609 aa12.24□□□□□ -0.45
CDC42BPB-207ENST00000560492 MRPL11Q9Y3B7 192 aaKnown RBP12.24□□□□□ -0.45
CDC42BPB-207ENST00000560492 INSL6Q9Y581 213 aa12.24□□□□□ -0.45
CDC42BPB-207ENST00000560492 PCDHB15Q9Y5E8 787 aa12.24□□□□□ -0.45
CDC42BPB-207ENST00000560492 NEDD4P46934 1319 aa12.23□□□□□ -0.45
CDC42BPB-207ENST00000560492 RBAK-RBAKDNI3L0D1 243 aa12.23□□□□□ -0.45
CDC42BPB-207ENST00000560492 ZNF213O14771 459 aa12.23□□□□□ -0.45
CDC42BPB-207ENST00000560492 LGR5O75473 907 aa12.23□□□□□ -0.45
CDC42BPB-207ENST00000560492 UPP2O95045 317 aa12.23□□□□□ -0.45
CDC42BPB-207ENST00000560492 CXCL10P02778 98 aa12.23□□□□□ -0.45
CDC42BPB-207ENST00000560492 SNHG28P0DPA3 235 aa12.23□□□□□ -0.45
CDC42BPB-207ENST00000560492 PCP11498 1178 aaKnown RBP12.23□□□□□ -0.45
CDC42BPB-207ENST00000560492 IL9P15248 144 aa12.23□□□□□ -0.45
CDC42BPB-207ENST00000560492 MFAP1P55081 439 aaKnown RBP12.23□□□□□ -0.45
CDC42BPB-207ENST00000560492 ZNF200P98182 395 aaPredicted RBP12.23□□□□□ -0.45
CDC42BPB-207ENST00000560492 LAMC2Q13753 1193 aa12.23□□□□□ -0.45
CDC42BPB-207ENST00000560492 PTPROQ16827 1216 aa12.23□□□□□ -0.45
CDC42BPB-207ENST00000560492 TCTN1Q2MV58 587 aa12.23□□□□□ -0.45
CDC42BPB-207ENST00000560492 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.23□□□□□ -0.45
CDC42BPB-207ENST00000560492 ZNF589Q86UQ0 364 aaPredicted RBP12.23□□□□□ -0.45
CDC42BPB-207ENST00000560492 SPATA33Q96N06 139 aa12.23□□□□□ -0.45
CDC42BPB-207ENST00000560492 CTAGE1Q96RT6 745 aa12.23□□□□□ -0.45
CDC42BPB-207ENST00000560492 YME1L1Q96TA2 773 aa12.23□□□□□ -0.45
CDC42BPB-207ENST00000560492 CD320Q9NPF0 282 aa12.23□□□□□ -0.45
CDC42BPB-207ENST00000560492 COL20A1Q9P218 1284 aa12.23□□□□□ -0.45
CDC42BPB-207ENST00000560492 CTNNA3Q9UI47 895 aa12.23□□□□□ -0.45
CDC42BPB-207ENST00000560492 ARIH1Q9Y4X5 557 aaPredicted RBP12.23□□□□□ -0.45
CDC42BPB-207ENST00000560492 KAT6AQ92794 2004 aa12.23□□□□□ -0.45
CDC42BPB-207ENST00000560492 DOCK5Q9H7D0 1870 aa12.23□□□□□ -0.45
CDC42BPB-207ENST00000560492 ZMYM6O95789 1325 aa12.22□□□□□ -0.45
CDC42BPB-207ENST00000560492 EMSYQ7Z589 1322 aa12.22□□□□□ -0.45
CDC42BPB-207ENST00000560492 RSPH10B2B2RC85 870 aa12.22□□□□□ -0.45
CDC42BPB-207ENST00000560492 PI4K2BG5E9Z4 385 aa12.22□□□□□ -0.45
CDC42BPB-207ENST00000560492 H3BQ06 376 aaPredicted RBP12.22□□□□□ -0.45
CDC42BPB-207ENST00000560492 KDM4AO75164 1064 aa12.22□□□□□ -0.45
CDC42BPB-207ENST00000560492 EIF3JO75822 258 aaKnown RBP12.22□□□□□ -0.45
CDC42BPB-207ENST00000560492 F2P00734 622 aa12.22□□□□□ -0.45
CDC42BPB-207ENST00000560492 NR3C2P08235 984 aa12.22□□□□□ -0.45
CDC42BPB-207ENST00000560492 PARP1P09874 1014 aaKnown RBP12.22□□□□□ -0.45
CDC42BPB-207ENST00000560492 RSPH10BP0C881 870 aa12.22□□□□□ -0.45
CDC42BPB-207ENST00000560492 PDE1AP54750 535 aa12.22□□□□□ -0.45
CDC42BPB-207ENST00000560492 GPNMBQ14956 572 aa12.22□□□□□ -0.45
CDC42BPB-207ENST00000560492 QRICH1Q2TAL8 776 aa12.22□□□□□ -0.45
CDC42BPB-207ENST00000560492 LEXMQ3ZCV2 418 aa12.22□□□□□ -0.45
CDC42BPB-207ENST00000560492 ASPRV1Q53RT3 343 aa12.22□□□□□ -0.45
CDC42BPB-207ENST00000560492 CCDC178Q5BJE1 867 aa12.22□□□□□ -0.45
CDC42BPB-207ENST00000560492 ALYREFQ86V81 257 aaKnown RBP12.22□□□□□ -0.45
CDC42BPB-207ENST00000560492 IFNLR1Q8IU57 520 aaPredicted RBP12.22□□□□□ -0.45
CDC42BPB-207ENST00000560492 FAM178BQ8IXR5 827 aa12.22□□□□□ -0.45
CDC42BPB-207ENST00000560492 DBF4BQ8NFT6 615 aa12.22□□□□□ -0.45
CDC42BPB-207ENST00000560492 PPTC7Q8NI37 304 aa12.22□□□□□ -0.45
CDC42BPB-207ENST00000560492 C11orf16Q9NQ32 467 aa12.22□□□□□ -0.45
CDC42BPB-207ENST00000560492 PXMP2Q9NR77 195 aa12.22□□□□□ -0.45
CDC42BPB-207ENST00000560492 DDX41Q9UJV9 622 aaKnown RBP12.22□□□□□ -0.45
CDC42BPB-207ENST00000560492 RALGAPA2Q2PPJ7 1873 aa12.21□□□□□ -0.45
CDC42BPB-207ENST00000560492 PRR33A8MZF0 331 aa12.21□□□□□ -0.45
CDC42BPB-207ENST00000560492 B4E1Z4 1266 aa12.21□□□□□ -0.45
CDC42BPB-207ENST00000560492 CSPG5O95196 566 aa12.21□□□□□ -0.45
CDC42BPB-207ENST00000560492 GGPS1O95749 300 aa12.21□□□□□ -0.45
CDC42BPB-207ENST00000560492 CTSHP09668 335 aa12.21□□□□□ -0.45
CDC42BPB-207ENST00000560492 ALADP13716 330 aa12.21□□□□□ -0.45
CDC42BPB-207ENST00000560492 RBL2Q08999 1139 aa12.21□□□□□ -0.45
CDC42BPB-207ENST00000560492 TIGD5Q53EQ6 642 aa12.21□□□□□ -0.45
CDC42BPB-207ENST00000560492 DGKHQ86XP1 1220 aa12.21□□□□□ -0.45
CDC42BPB-207ENST00000560492 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.21□□□□□ -0.45
CDC42BPB-207ENST00000560492 ATP6V0A1Q93050 837 aa12.21□□□□□ -0.45
CDC42BPB-207ENST00000560492 WNT8BQ93098 351 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms