RNA–Protein interactions for RNA: ENST00000560483.1

LRRC28-219, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-219ENST00000560483 MYCLP12524 364 aaPredicted RBP9.22□□□□□ -0.93
LRRC28-219ENST00000560483 EIF2AK2P19525 551 aaKnown RBP9.22□□□□□ -0.93
LRRC28-219ENST00000560483 HOXA13P31271 388 aaPredicted RBP9.22□□□□□ -0.93
LRRC28-219ENST00000560483 ALDH5A1P51649 535 aaPredicted RBP9.22□□□□□ -0.93
LRRC28-219ENST00000560483 CCT2P78371 535 aaKnown RBP9.22□□□□□ -0.93
LRRC28-219ENST00000560483 TMTC3Q6ZXV5 915 aa9.22□□□□□ -0.93
LRRC28-219ENST00000560483 RNF180Q86T96 592 aa9.22□□□□□ -0.93
LRRC28-219ENST00000560483 SGMS1Q86VZ5 419 aa9.22□□□□□ -0.93
LRRC28-219ENST00000560483 SRBD1Q8N5C6 995 aaKnown RBP9.22□□□□□ -0.93
LRRC28-219ENST00000560483 FAM133AQ8N9E0 248 aa9.22□□□□□ -0.93
LRRC28-219ENST00000560483 DIS3LQ8TF46 1054 aaKnown RBP9.22□□□□□ -0.93
LRRC28-219ENST00000560483 CLEC4DQ8WXI8 215 aa9.22□□□□□ -0.93
LRRC28-219ENST00000560483 LENG1Q96BZ8 264 aaPredicted RBP9.22□□□□□ -0.93
LRRC28-219ENST00000560483 SHISA4Q96DD7 197 aa9.22□□□□□ -0.93
LRRC28-219ENST00000560483 RMDN3Q96TC7 470 aa9.22□□□□□ -0.93
LRRC28-219ENST00000560483 MAP3K14Q99558 947 aa9.22□□□□□ -0.93
LRRC28-219ENST00000560483 SPZ1Q9BXG8 430 aa9.22□□□□□ -0.93
LRRC28-219ENST00000560483 SENP6Q9GZR1 1112 aaPredicted RBP9.22□□□□□ -0.93
LRRC28-219ENST00000560483 C11orf49Q9H6J7 331 aa9.22□□□□□ -0.93
LRRC28-219ENST00000560483 RIOX1Q9H6W3 641 aa9.22□□□□□ -0.93
LRRC28-219ENST00000560483 NRBP1Q9UHY1 535 aa9.22□□□□□ -0.93
LRRC28-219ENST00000560483 BRPF3Q9ULD4 1205 aa9.22□□□□□ -0.93
LRRC28-219ENST00000560483 SLC27A5Q9Y2P5 690 aa9.22□□□□□ -0.93
LRRC28-219ENST00000560483 DDX49Q9Y6V7 483 aaKnown RBP9.22□□□□□ -0.93
LRRC28-219ENST00000560483 MKI67P46013 3256 aaKnown RBP9.22□□□□□ -0.93
LRRC28-219ENST00000560483 DNAJC25-GNG10A0A024R161 153 aa9.21□□□□□ -0.94
LRRC28-219ENST00000560483 CYTH3O43739 400 aa9.21□□□□□ -0.94
LRRC28-219ENST00000560483 SNAI1O95863 264 aaPredicted RBP9.21□□□□□ -0.94
LRRC28-219ENST00000560483 PGK1P00558 417 aa9.21□□□□□ -0.94
LRRC28-219ENST00000560483 C6orf222P0C671 652 aaPredicted RBP9.21□□□□□ -0.94
LRRC28-219ENST00000560483 RPIAP49247 311 aa9.21□□□□□ -0.94
LRRC28-219ENST00000560483 NAPAP54920 295 aa9.21□□□□□ -0.94
LRRC28-219ENST00000560483 TNFAIP2Q03169 654 aa9.21□□□□□ -0.94
LRRC28-219ENST00000560483 CCDC144BQ3MJ40 725 aa9.21□□□□□ -0.94
LRRC28-219ENST00000560483 CPLX2Q6PUV4 134 aaKnown RBP9.21□□□□□ -0.94
LRRC28-219ENST00000560483 RNF19BQ6ZMZ0 732 aa9.21□□□□□ -0.94
LRRC28-219ENST00000560483 SEPT14Q6ZU15 432 aa9.21□□□□□ -0.94
LRRC28-219ENST00000560483 CYP4X1Q8N118 509 aa9.21□□□□□ -0.94
LRRC28-219ENST00000560483 NSUN6Q8TEA1 469 aaKnown RBP9.21□□□□□ -0.94
LRRC28-219ENST00000560483 TBC1D5Q92609 795 aa9.21□□□□□ -0.94
LRRC28-219ENST00000560483 GPKOWQ92917 476 aaPredicted RBP eCLIP9.21□□□□□ -0.94
LRRC28-219ENST00000560483 FERMT2Q96AC1 680 aa9.21□□□□□ -0.94
LRRC28-219ENST00000560483 AP5M1Q9H0R1 490 aa9.21□□□□□ -0.94
LRRC28-219ENST00000560483 GPR37O15354 613 aa9.2□□□□□ -0.94
LRRC28-219ENST00000560483 PPP1R11O60927 126 aaPredicted RBP9.2□□□□□ -0.94
LRRC28-219ENST00000560483 ZNF865P0CJ78 1059 aaPredicted RBP9.2□□□□□ -0.94
LRRC28-219ENST00000560483 SMPD1P17405 629 aa9.2□□□□□ -0.94
LRRC28-219ENST00000560483 CAPN2P17655 700 aa9.2□□□□□ -0.94
LRRC28-219ENST00000560483 ADD1P35611 737 aaKnown RBP9.2□□□□□ -0.94
LRRC28-219ENST00000560483 ADCYAP1R1P41586 468 aa9.2□□□□□ -0.94
LRRC28-219ENST00000560483 RGS19P49795 217 aa9.2□□□□□ -0.94
LRRC28-219ENST00000560483 NEK4P51957 841 aa9.2□□□□□ -0.94
LRRC28-219ENST00000560483 CHMP4BP1P59074 171 aa9.2□□□□□ -0.94
LRRC28-219ENST00000560483 MAMDC4Q6UXC1 1216 aa9.2□□□□□ -0.94
LRRC28-219ENST00000560483 TRIM22Q8IYM9 498 aa9.2□□□□□ -0.94
LRRC28-219ENST00000560483 DNERQ8NFT8 737 aa9.2□□□□□ -0.94
LRRC28-219ENST00000560483 SYTL5Q8TDW5 730 aaPredicted RBP9.2□□□□□ -0.94
LRRC28-219ENST00000560483 KCNB2Q92953 911 aa9.2□□□□□ -0.94
LRRC28-219ENST00000560483 TAAR1Q96RJ0 339 aa9.2□□□□□ -0.94
LRRC28-219ENST00000560483 PHOX2BQ99453 314 aa9.2□□□□□ -0.94
LRRC28-219ENST00000560483 SLC26A6Q9BXS9 759 aa9.2□□□□□ -0.94
LRRC28-219ENST00000560483 PSTPIP2Q9H939 334 aa9.2□□□□□ -0.94
LRRC28-219ENST00000560483 VTA1Q9NP79 307 aa9.2□□□□□ -0.94
LRRC28-219ENST00000560483 DAXXQ9UER7 740 aaPredicted RBP9.2□□□□□ -0.94
LRRC28-219ENST00000560483 OGDHLQ9ULD0 1010 aa9.2□□□□□ -0.94
LRRC28-219ENST00000560483 FRMPD3Q5JV73 1810 aa9.19□□□□□ -0.94
LRRC28-219ENST00000560483 PDE4DIPQ5VU43 2346 aa9.19□□□□□ -0.94
LRRC28-219ENST00000560483 SPDYE3A6NKU9 549 aa9.19□□□□□ -0.94
LRRC28-219ENST00000560483 DNM1LO00429 736 aa9.19□□□□□ -0.94
LRRC28-219ENST00000560483 DYNC1LI2O43237 492 aaPredicted RBP9.19□□□□□ -0.94
LRRC28-219ENST00000560483 ZEB2O60315 1214 aa9.19□□□□□ -0.94
LRRC28-219ENST00000560483 SMARCA1P28370 1054 aa9.19□□□□□ -0.94
LRRC28-219ENST00000560483 CDC27P30260 824 aa9.19□□□□□ -0.94
LRRC28-219ENST00000560483 ANAPC15P60006 121 aa9.19□□□□□ -0.94
LRRC28-219ENST00000560483 PPP2R5BQ15173 497 aa9.19□□□□□ -0.94
LRRC28-219ENST00000560483 ANKRD1Q15327 319 aa9.19□□□□□ -0.94
LRRC28-219ENST00000560483 STXBP2Q15833 593 aa9.19□□□□□ -0.94
LRRC28-219ENST00000560483 BRDTQ58F21 947 aaPredicted RBP9.19□□□□□ -0.94
LRRC28-219ENST00000560483 GNASQ5JWF2 1037 aa9.19□□□□□ -0.94
LRRC28-219ENST00000560483 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.19□□□□□ -0.94
LRRC28-219ENST00000560483 TLK2Q86UE8 772 aa9.19□□□□□ -0.94
LRRC28-219ENST00000560483 C7orf61Q8IZ16 206 aa9.19□□□□□ -0.94
LRRC28-219ENST00000560483 RGS22Q8NE09 1264 aa9.19□□□□□ -0.94
LRRC28-219ENST00000560483 PHKBQ93100 1093 aa9.19□□□□□ -0.94
LRRC28-219ENST00000560483 MTMR8Q96EF0 704 aa9.19□□□□□ -0.94
LRRC28-219ENST00000560483 FGD4Q96M96 766 aa9.19□□□□□ -0.94
LRRC28-219ENST00000560483 WDR11Q9BZH6 1224 aa9.19□□□□□ -0.94
LRRC28-219ENST00000560483 TM6SF1Q9BZW5 370 aa9.19□□□□□ -0.94
LRRC28-219ENST00000560483 SLKQ9H2G2 1235 aaPredicted RBP9.19□□□□□ -0.94
LRRC28-219ENST00000560483 EHMT1Q9H9B1 1298 aa9.19□□□□□ -0.94
LRRC28-219ENST00000560483 NCOA5Q9HCD5 579 aaKnown RBP9.19□□□□□ -0.94
LRRC28-219ENST00000560483 PDGFCQ9NRA1 345 aa9.19□□□□□ -0.94
LRRC28-219ENST00000560483 PRKAG2Q9UGJ0 569 aa9.19□□□□□ -0.94
LRRC28-219ENST00000560483 NR2E3Q9Y5X4 410 aa9.19□□□□□ -0.94
LRRC28-219ENST00000560483 CNTNAP5Q8WYK1 1306 aa9.19□□□□□ -0.94
LRRC28-219ENST00000560483 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.18□□□□□ -0.94
LRRC28-219ENST00000560483 SORBS3O60504 671 aa9.18□□□□□ -0.94
LRRC28-219ENST00000560483 DUSP11O75319 330 aaKnown RBP9.18□□□□□ -0.94
LRRC28-219ENST00000560483 TXNP10599 105 aaKnown RBP9.18□□□□□ -0.94
LRRC28-219ENST00000560483 CCND2P30279 289 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 141.3 ms