RNA–Protein interactions for RNA: ENST00000559734.1

TRAF3-207, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-207ENST00000559734 CTSHP09668 335 aa12.64□□□□□ -0.39
TRAF3-207ENST00000559734 GOLGA8HP0CJ92 632 aa12.64□□□□□ -0.39
TRAF3-207ENST00000559734 EIF2AK2P19525 551 aaKnown RBP12.64□□□□□ -0.39
TRAF3-207ENST00000559734 CTNNB1P35222 781 aa12.64□□□□□ -0.39
TRAF3-207ENST00000559734 NOVP48745 357 aa12.64□□□□□ -0.39
TRAF3-207ENST00000559734 VPS53Q5VIR6 699 aa12.64□□□□□ -0.39
TRAF3-207ENST00000559734 ARHGEF16Q5VV41 709 aa12.64□□□□□ -0.39
TRAF3-207ENST00000559734 PRSS33Q8NF86 280 aa12.64□□□□□ -0.39
TRAF3-207ENST00000559734 SYTL5Q8TDW5 730 aaPredicted RBP12.64□□□□□ -0.39
TRAF3-207ENST00000559734 NSUN6Q8TEA1 469 aaKnown RBP12.64□□□□□ -0.39
TRAF3-207ENST00000559734 TBC1D5Q92609 795 aa12.64□□□□□ -0.39
TRAF3-207ENST00000559734 POP1Q99575 1024 aaKnown RBP12.64□□□□□ -0.39
TRAF3-207ENST00000559734 UBA5Q9GZZ9 404 aa12.64□□□□□ -0.39
TRAF3-207ENST00000559734 COL20A1Q9P218 1284 aa12.64□□□□□ -0.39
TRAF3-207ENST00000559734 DDX41Q9UJV9 622 aaKnown RBP12.64□□□□□ -0.39
TRAF3-207ENST00000559734 FOXP2O15409 715 aa12.63□□□□□ -0.39
TRAF3-207ENST00000559734 PTPN5P54829 565 aa12.63□□□□□ -0.39
TRAF3-207ENST00000559734 LAMC2Q13753 1193 aa12.63□□□□□ -0.39
TRAF3-207ENST00000559734 HIC1Q14526 733 aa12.63□□□□□ -0.39
TRAF3-207ENST00000559734 RNF135Q8IUD6 432 aa12.63□□□□□ -0.39
TRAF3-207ENST00000559734 PPTC7Q8NI37 304 aa12.63□□□□□ -0.39
TRAF3-207ENST00000559734 SEPT8Q92599 483 aa12.63□□□□□ -0.39
TRAF3-207ENST00000559734 RMDN3Q96TC7 470 aa12.63□□□□□ -0.39
TRAF3-207ENST00000559734 IFIH1Q9BYX4 1025 aaKnown RBP12.63□□□□□ -0.39
TRAF3-207ENST00000559734 IGFLR1Q9H665 355 aa12.63□□□□□ -0.39
TRAF3-207ENST00000559734 ANAPC4Q9UJX5 808 aa12.63□□□□□ -0.39
TRAF3-207ENST00000559734 STXBP3O00186 592 aa12.62□□□□□ -0.39
TRAF3-207ENST00000559734 HAS3O00219 553 aa12.62□□□□□ -0.39
TRAF3-207ENST00000559734 MBTPS2O43462 519 aa12.62□□□□□ -0.39
TRAF3-207ENST00000559734 DHX16O60231 1041 aaKnown RBP12.62□□□□□ -0.39
TRAF3-207ENST00000559734 DLX2Q07687 328 aaPredicted RBP12.62□□□□□ -0.39
TRAF3-207ENST00000559734 MKRN4PQ13434 485 aaPredicted RBP12.62□□□□□ -0.39
TRAF3-207ENST00000559734 SMAD2Q15796 467 aaKnown RBP12.62□□□□□ -0.39
TRAF3-207ENST00000559734 CDC37Q16543 378 aaPredicted RBP12.62□□□□□ -0.39
TRAF3-207ENST00000559734 PLEKHG4Q58EX7 1191 aa12.62□□□□□ -0.39
TRAF3-207ENST00000559734 HERC4Q5GLZ8 1057 aaPredicted RBP12.62□□□□□ -0.39
TRAF3-207ENST00000559734 IER5LQ5T953 404 aa12.62□□□□□ -0.39
TRAF3-207ENST00000559734 SUGP1Q8IWZ8 645 aaKnown RBP12.62□□□□□ -0.39
TRAF3-207ENST00000559734 FIBCD1Q8N539 461 aa12.62□□□□□ -0.39
TRAF3-207ENST00000559734 ATP6V0A1Q93050 837 aa12.62□□□□□ -0.39
TRAF3-207ENST00000559734 TOP1MTQ969P6 601 aa12.62□□□□□ -0.39
TRAF3-207ENST00000559734 ABCB11O95342 1321 aa12.62□□□□□ -0.39
TRAF3-207ENST00000559734 C17orf102A2RUQ5 167 aa12.61□□□□□ -0.39
TRAF3-207ENST00000559734 NCK2O43639 380 aa12.61□□□□□ -0.39
TRAF3-207ENST00000559734 ST18O60284 1047 aa12.61□□□□□ -0.39
TRAF3-207ENST00000559734 MYCLP12524 364 aaPredicted RBP12.61□□□□□ -0.39
TRAF3-207ENST00000559734 LTBRP36941 435 aa12.61□□□□□ -0.39
TRAF3-207ENST00000559734 HAND2P61296 217 aa12.61□□□□□ -0.39
TRAF3-207ENST00000559734 HYAL1Q12794 435 aa12.61□□□□□ -0.39
TRAF3-207ENST00000559734 SMAD4Q13485 552 aaKnown RBP12.61□□□□□ -0.39
TRAF3-207ENST00000559734 SERINC5Q86VE9 423 aa12.61□□□□□ -0.39
TRAF3-207ENST00000559734 MCF2L2Q86YR7 1114 aa12.61□□□□□ -0.39
TRAF3-207ENST00000559734 RGS22Q8NE09 1264 aa12.61□□□□□ -0.39
TRAF3-207ENST00000559734 PI4K2BQ8TCG2 481 aa12.61□□□□□ -0.39
TRAF3-207ENST00000559734 OTUD7AQ8TE49 926 aaPredicted RBP12.61□□□□□ -0.39
TRAF3-207ENST00000559734 EMID1Q96A84 441 aaPredicted RBP12.61□□□□□ -0.39
TRAF3-207ENST00000559734 PBXIP1Q96AQ6 731 aa12.61□□□□□ -0.39
TRAF3-207ENST00000559734 SPATA33Q96N06 139 aa12.61□□□□□ -0.39
TRAF3-207ENST00000559734 IWS1Q96ST2 819 aa12.61□□□□□ -0.39
TRAF3-207ENST00000559734 FAM86C1Q9NVL1 165 aa12.61□□□□□ -0.39
TRAF3-207ENST00000559734 TTC41PQ6P2S7 1318 aa12.61□□□□□ -0.39
TRAF3-207ENST00000559734 MICAL3Q7RTP6 2002 aa12.61□□□□□ -0.39
TRAF3-207ENST00000559734 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.6□□□□□ -0.39
TRAF3-207ENST00000559734 TMEM221A6NGB7 291 aa12.6□□□□□ -0.39
TRAF3-207ENST00000559734 M0R296 226 aa12.6□□□□□ -0.39
TRAF3-207ENST00000559734 GRM6O15303 877 aa12.6□□□□□ -0.39
TRAF3-207ENST00000559734 LINC01565O15544 149 aa12.6□□□□□ -0.39
TRAF3-207ENST00000559734 TBX10O75333 385 aa12.6□□□□□ -0.39
TRAF3-207ENST00000559734 EIF3JO75822 258 aaKnown RBP12.6□□□□□ -0.39
TRAF3-207ENST00000559734 GGPS1O95749 300 aa12.6□□□□□ -0.39
TRAF3-207ENST00000559734 CFBP00751 764 aa12.6□□□□□ -0.39
TRAF3-207ENST00000559734 GTF2F1P35269 517 aaKnown RBP eCLIP12.6□□□□□ -0.39
TRAF3-207ENST00000559734 NDUFV1P49821 464 aa12.6□□□□□ -0.39
TRAF3-207ENST00000559734 COL19A1Q14993 1142 aa12.6□□□□□ -0.39
TRAF3-207ENST00000559734 GPATCH4Q5T3I0 446 aaKnown RBP12.6□□□□□ -0.39
TRAF3-207ENST00000559734 EDAQ92838 391 aa12.6□□□□□ -0.39
TRAF3-207ENST00000559734 IL17RAQ96F46 866 aa12.6□□□□□ -0.39
TRAF3-207ENST00000559734 ZKSCAN3Q9BRR0 538 aa12.6□□□□□ -0.39
TRAF3-207ENST00000559734 OSBPL7Q9BZF2 842 aa12.6□□□□□ -0.39
TRAF3-207ENST00000559734 PXMP2Q9NR77 195 aa12.6□□□□□ -0.39
TRAF3-207ENST00000559734 TCP11L1Q9NUJ3 509 aa12.6□□□□□ -0.39
TRAF3-207ENST00000559734 CD207Q9UJ71 328 aa12.6□□□□□ -0.39
TRAF3-207ENST00000559734 U3KPZ7 1027 aaPredicted RBP12.6□□□□□ -0.39
TRAF3-207ENST00000559734 TREHO43280 583 aa12.59□□□□□ -0.39
TRAF3-207ENST00000559734 NR3C2P08235 984 aa12.59□□□□□ -0.39
TRAF3-207ENST00000559734 FGRP09769 529 aa12.59□□□□□ -0.39
TRAF3-207ENST00000559734 SMIM10L2AP0DMW4 78 aa12.59□□□□□ -0.39
TRAF3-207ENST00000559734 SMIM10L2BP0DMW5 78 aa12.59□□□□□ -0.39
TRAF3-207ENST00000559734 SNHG28P0DPA3 235 aa12.59□□□□□ -0.39
TRAF3-207ENST00000559734 HSDL1Q3SXM5 330 aa12.59□□□□□ -0.39
TRAF3-207ENST00000559734 C11orf84Q9BUA3 381 aaPredicted RBP12.59□□□□□ -0.39
TRAF3-207ENST00000559734 LMAN2LQ9H0V9 348 aa12.59□□□□□ -0.39
TRAF3-207ENST00000559734 DCTPP1Q9H773 170 aa12.59□□□□□ -0.39
TRAF3-207ENST00000559734 VAT1LQ9HCJ6 419 aa12.59□□□□□ -0.39
TRAF3-207ENST00000559734 MRPL11Q9Y3B7 192 aaKnown RBP12.59□□□□□ -0.39
TRAF3-207ENST00000559734 CCDC171Q6TFL3 1326 aa12.59□□□□□ -0.39
TRAF3-207ENST00000559734 GFRA3O60609 400 aa12.58□□□□□ -0.4
TRAF3-207ENST00000559734 PPFIA4O75335 1185 aa12.58□□□□□ -0.4
TRAF3-207ENST00000559734 FGAP02671 866 aa12.58□□□□□ -0.4
TRAF3-207ENST00000559734 HSPD1P10809 573 aaKnown RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms