RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 TRMT13Q9NUP7 481 aaKnown RBP14.47□□□□□ -0.09
LRRC28-214ENST00000559433 NOD1Q9Y239 953 aa14.47□□□□□ -0.09
LRRC28-214ENST00000559433 V9GY48 417 aaPredicted RBP14.47□□□□□ -0.09
LRRC28-214ENST00000559433 NID2Q14112 1375 aa14.47□□□□□ -0.09
LRRC28-214ENST00000559433 TANC1Q9C0D5 1861 aa14.46□□□□□ -0.09
LRRC28-214ENST00000559433 CCDC196A0A1B0GTZ2 297 aa14.46□□□□□ -0.09
LRRC28-214ENST00000559433 SPDYE3A6NKU9 549 aa14.46□□□□□ -0.09
LRRC28-214ENST00000559433 TGFB3P10600 412 aa14.46□□□□□ -0.09
LRRC28-214ENST00000559433 CYP2C18P33260 490 aa14.46□□□□□ -0.09
LRRC28-214ENST00000559433 C1QBPQ07021 282 aaKnown RBP14.46□□□□□ -0.09
LRRC28-214ENST00000559433 CELF3Q5SZQ8 465 aaKnown RBP14.46□□□□□ -0.09
LRRC28-214ENST00000559433 MYSM1Q5VVJ2 828 aa14.46□□□□□ -0.09
LRRC28-214ENST00000559433 PCNX4Q63HM2 1172 aa14.46□□□□□ -0.09
LRRC28-214ENST00000559433 PPP1R18Q6NYC8 613 aa14.46□□□□□ -0.09
LRRC28-214ENST00000559433 FBXL16Q8N461 479 aa14.46□□□□□ -0.09
LRRC28-214ENST00000559433 SPATA33Q96N06 139 aa14.46□□□□□ -0.09
LRRC28-214ENST00000559433 RTEL1Q9NZ71 1219 aa14.46□□□□□ -0.09
LRRC28-214ENST00000559433 hCG_1984214I3L0E3 225 aa14.45□□□□□ -0.1
LRRC28-214ENST00000559433 ZNF286BP0CG31 522 aa14.45□□□□□ -0.1
LRRC28-214ENST00000559433 CSF2RAP15509 400 aa14.45□□□□□ -0.1
LRRC28-214ENST00000559433 ADD1P35611 737 aaKnown RBP14.45□□□□□ -0.1
LRRC28-214ENST00000559433 ADCY7P51828 1080 aa14.45□□□□□ -0.1
LRRC28-214ENST00000559433 SP2Q02086 613 aa14.45□□□□□ -0.1
LRRC28-214ENST00000559433 XRRA1Q6P2D8 792 aa14.45□□□□□ -0.1
LRRC28-214ENST00000559433 RUFY3Q7L099 469 aa14.45□□□□□ -0.1
LRRC28-214ENST00000559433 RPUSD2Q8IZ73 545 aaKnown RBP14.45□□□□□ -0.1
LRRC28-214ENST00000559433 ZNF713Q8N859 430 aaPredicted RBP14.45□□□□□ -0.1
LRRC28-214ENST00000559433 RETREG2Q8NC44 543 aa14.45□□□□□ -0.1
LRRC28-214ENST00000559433 INPP4AQ96PE3 977 aaPredicted RBP14.45□□□□□ -0.1
LRRC28-214ENST00000559433 NOC4LQ9BVI4 516 aaKnown RBP14.45□□□□□ -0.1
LRRC28-214ENST00000559433 AGXT2Q9BYV1 514 aa14.45□□□□□ -0.1
LRRC28-214ENST00000559433 EHMT1Q9H9B1 1298 aa14.45□□□□□ -0.1
LRRC28-214ENST00000559433 MLXIPQ9HAP2 919 aa14.45□□□□□ -0.1
LRRC28-214ENST00000559433 ZSWIM6Q9HCJ5 1215 aa14.45□□□□□ -0.1
LRRC28-214ENST00000559433 CYP46A1Q9Y6A2 500 aa14.45□□□□□ -0.1
LRRC28-214ENST00000559433 LAMA2P24043 3122 aaKnown RBP14.45□□□□□ -0.1
LRRC28-214ENST00000559433 UMODL1Q5DID0 1318 aa14.44□□□□□ -0.1
LRRC28-214ENST00000559433 SPATA31C2B4DYI2 1134 aa14.44□□□□□ -0.1
LRRC28-214ENST00000559433 STXBP3O00186 592 aa14.44□□□□□ -0.1
LRRC28-214ENST00000559433 FIBPO43427 364 aa14.44□□□□□ -0.1
LRRC28-214ENST00000559433 CYP2C9P11712 490 aa14.44□□□□□ -0.1
LRRC28-214ENST00000559433 ICAM3P32942 547 aa14.44□□□□□ -0.1
LRRC28-214ENST00000559433 CCL23P55773 120 aa14.44□□□□□ -0.1
LRRC28-214ENST00000559433 PTPN11Q06124 597 aaPredicted RBP14.44□□□□□ -0.1
LRRC28-214ENST00000559433 HSDL1Q3SXM5 330 aa14.44□□□□□ -0.1
LRRC28-214ENST00000559433 ZNF697Q5TEC3 545 aa14.44□□□□□ -0.1
LRRC28-214ENST00000559433 TYW1BQ6NUM6 668 aa14.44□□□□□ -0.1
LRRC28-214ENST00000559433 Q7L0L9 218 aa14.44□□□□□ -0.1
LRRC28-214ENST00000559433 NLRX1Q86UT6 975 aa14.44□□□□□ -0.1
LRRC28-214ENST00000559433 KAT2BQ92831 832 aa14.44□□□□□ -0.1
LRRC28-214ENST00000559433 KATNAL1Q9BW62 490 aa14.44□□□□□ -0.1
LRRC28-214ENST00000559433 MTIF3Q9H2K0 278 aaKnown RBP14.44□□□□□ -0.1
LRRC28-214ENST00000559433 RIC8AQ9NPQ8 531 aa14.44□□□□□ -0.1
LRRC28-214ENST00000559433 BARHL2Q9NY43 387 aa14.44□□□□□ -0.1
LRRC28-214ENST00000559433 PCDHA6Q9UN73 950 aa14.44□□□□□ -0.1
LRRC28-214ENST00000559433 PCDHA8Q9Y5H6 950 aa14.44□□□□□ -0.1
LRRC28-214ENST00000559433 SCN5AQ14524 2016 aa14.44□□□□□ -0.1
LRRC28-214ENST00000559433 TRIP12Q14669 1992 aaPredicted RBP14.43□□□□□ -0.1
LRRC28-214ENST00000559433 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.43□□□□□ -0.1
LRRC28-214ENST00000559433 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.43□□□□□ -0.1
LRRC28-214ENST00000559433 NOP56O00567 594 aaKnown RBP14.43□□□□□ -0.1
LRRC28-214ENST00000559433 F2P00734 622 aa14.43□□□□□ -0.1
LRRC28-214ENST00000559433 FGBP02675 491 aa14.43□□□□□ -0.1
LRRC28-214ENST00000559433 ACRP10323 421 aa14.43□□□□□ -0.1
LRRC28-214ENST00000559433 PSEN2P49810 448 aa14.43□□□□□ -0.1
LRRC28-214ENST00000559433 SMAD3P84022 425 aaKnown RBP14.43□□□□□ -0.1
LRRC28-214ENST00000559433 SEMA3FQ13275 785 aa14.43□□□□□ -0.1
LRRC28-214ENST00000559433 NEDD9Q14511 834 aa14.43□□□□□ -0.1
LRRC28-214ENST00000559433 MFSD10Q14728 455 aa14.43□□□□□ -0.1
LRRC28-214ENST00000559433 PFKFB3Q16875 520 aaPredicted RBP14.43□□□□□ -0.1
LRRC28-214ENST00000559433 FAM109BQ6ICB4 259 aaPredicted RBP14.43□□□□□ -0.1
LRRC28-214ENST00000559433 PSRC1Q6PGN9 363 aaPredicted RBP14.43□□□□□ -0.1
LRRC28-214ENST00000559433 C7orf31Q8N865 590 aa14.43□□□□□ -0.1
LRRC28-214ENST00000559433 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.43□□□□□ -0.1
LRRC28-214ENST00000559433 ALG1Q9BT22 464 aa14.43□□□□□ -0.1
LRRC28-214ENST00000559433 UPF3BQ9BZI7 483 aaKnown RBP14.43□□□□□ -0.1
LRRC28-214ENST00000559433 TM6SF1Q9BZW5 370 aa14.43□□□□□ -0.1
LRRC28-214ENST00000559433 WNT8AQ9H1J5 351 aa14.43□□□□□ -0.1
LRRC28-214ENST00000559433 SMCO2A6NFE2 343 aa14.42□□□□□ -0.1
LRRC28-214ENST00000559433 PPFIA4O75335 1185 aa14.42□□□□□ -0.1
LRRC28-214ENST00000559433 HOXD8P13378 290 aaPredicted RBP14.42□□□□□ -0.1
LRRC28-214ENST00000559433 SCG2P13521 617 aa14.42□□□□□ -0.1
LRRC28-214ENST00000559433 PDIA3P30101 505 aaKnown RBP14.42□□□□□ -0.1
LRRC28-214ENST00000559433 CCT2P78371 535 aaKnown RBP14.42□□□□□ -0.1
LRRC28-214ENST00000559433 AKAP17AQ02040 695 aaKnown RBP14.42□□□□□ -0.1
LRRC28-214ENST00000559433 TOB2Q14106 344 aaPredicted RBP14.42□□□□□ -0.1
LRRC28-214ENST00000559433 PTGISQ16647 500 aa14.42□□□□□ -0.1
LRRC28-214ENST00000559433 KIAA0753Q2KHM9 967 aa14.42□□□□□ -0.1
LRRC28-214ENST00000559433 METTL7BQ6UX53 244 aa14.42□□□□□ -0.1
LRRC28-214ENST00000559433 CYFIP1Q7L576 1253 aa14.42□□□□□ -0.1
LRRC28-214ENST00000559433 SESTD1Q86VW0 696 aa14.42□□□□□ -0.1
LRRC28-214ENST00000559433 TEX2Q8IWB9 1127 aa14.42□□□□□ -0.1
LRRC28-214ENST00000559433 GPRASP2Q96D09 838 aa14.42□□□□□ -0.1
LRRC28-214ENST00000559433 FAM161BQ96MY7 647 aa14.42□□□□□ -0.1
LRRC28-214ENST00000559433 GLT8D2Q9H1C3 349 aa14.42□□□□□ -0.1
LRRC28-214ENST00000559433 BCAS3Q9H6U6 928 aa14.42□□□□□ -0.1
LRRC28-214ENST00000559433 IL23AQ9NPF7 189 aa14.42□□□□□ -0.1
LRRC28-214ENST00000559433 ITGB5P18084 799 aa14.41□□□□□ -0.1
LRRC28-214ENST00000559433 EVCP57679 992 aa14.41□□□□□ -0.1
LRRC28-214ENST00000559433 BFSP2Q13515 415 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms