RNA–Protein interactions for RNA: ENST00000559327.1

IGDCC4-204, Transcript of immunoglobulin superfamily DCC subclass member 4, humanhuman

TSL 1 (best)

Gene IGDCC4, Length 5,544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGDCC4-204ENST00000559327 SLC12A2P55011 1212 aa21.42■■□□□ 1.02
IGDCC4-204ENST00000559327 LRRC41Q15345 812 aa21.42■■□□□ 1.02
IGDCC4-204ENST00000559327 PPRC1Q5VV67 1664 aaKnown RBP21.42■■□□□ 1.02
IGDCC4-204ENST00000559327 ABL1P00519 1130 aa21.42■■□□□ 1.02
IGDCC4-204ENST00000559327 RFX1P22670 979 aa21.42■■□□□ 1.02
IGDCC4-204ENST00000559327 METTL23Q86XA0 190 aa21.42■■□□□ 1.02
IGDCC4-204ENST00000559327 NLRP7Q8WX94 980 aa21.42■■□□□ 1.02
IGDCC4-204ENST00000559327 USP17L5A8MUK1 530 aa21.42■■□□□ 1.02
IGDCC4-204ENST00000559327 ZSCAN20P17040 1043 aaPredicted RBP21.42■■□□□ 1.02
IGDCC4-204ENST00000559327 PTPREP23469 700 aa21.42■■□□□ 1.02
IGDCC4-204ENST00000559327 CACNB1Q02641 598 aaPredicted RBP21.42■■□□□ 1.02
IGDCC4-204ENST00000559327 NFIXQ14938 502 aa21.42■■□□□ 1.02
IGDCC4-204ENST00000559327 PLA2G12BQ9BX93 195 aa21.42■■□□□ 1.02
IGDCC4-204ENST00000559327 EMILIN3Q9NT22 766 aa21.42■■□□□ 1.02
IGDCC4-204ENST00000559327 OATP04181 439 aa21.41■■□□□ 1.02
IGDCC4-204ENST00000559327 PPFIA1Q13136 1202 aa21.41■■□□□ 1.02
IGDCC4-204ENST00000559327 PDXDC2PQ6P474 469 aa21.41■■□□□ 1.02
IGDCC4-204ENST00000559327 ZBTB9Q96C00 473 aa21.41■■□□□ 1.02
IGDCC4-204ENST00000559327 PHBP35232 272 aa21.41■■□□□ 1.02
IGDCC4-204ENST00000559327 SURF1Q15526 300 aa21.41■■□□□ 1.02
IGDCC4-204ENST00000559327 TBC1D10BQ4KMP7 808 aaPredicted RBP21.41■■□□□ 1.02
IGDCC4-204ENST00000559327 B4GALNT4Q76KP1 1039 aa21.41■■□□□ 1.02
IGDCC4-204ENST00000559327 MAP7D3Q8IWC1 876 aa21.41■■□□□ 1.02
IGDCC4-204ENST00000559327 ATP2A3Q93084 1043 aa21.41■■□□□ 1.02
IGDCC4-204ENST00000559327 THAP9Q9H5L6 903 aa21.41■■□□□ 1.02
IGDCC4-204ENST00000559327 SUGT1Q9Y2Z0 365 aa21.41■■□□□ 1.02
IGDCC4-204ENST00000559327 IFNB1P01574 187 aa21.41■■□□□ 1.02
IGDCC4-204ENST00000559327 HSPA1LP34931 641 aa21.41■■□□□ 1.02
IGDCC4-204ENST00000559327 MNAT1P51948 309 aa21.41■■□□□ 1.02
IGDCC4-204ENST00000559327 PFKFB3Q16875 520 aaPredicted RBP21.41■■□□□ 1.02
IGDCC4-204ENST00000559327 DDX41Q9UJV9 622 aaKnown RBP21.41■■□□□ 1.02
IGDCC4-204ENST00000559327 ARHGEF40Q8TER5 1519 aa21.41■■□□□ 1.02
IGDCC4-204ENST00000559327 ARHGEF37A1IGU5 675 aa21.41■■□□□ 1.02
IGDCC4-204ENST00000559327 CASP14P31944 242 aa21.41■■□□□ 1.02
IGDCC4-204ENST00000559327 IFT122Q9HBG6 1241 aa21.41■■□□□ 1.02
IGDCC4-204ENST00000559327 SPATA24Q86W54 205 aa21.4■■□□□ 1.02
IGDCC4-204ENST00000559327 PALM2Q8IXS6 379 aa21.4■■□□□ 1.02
IGDCC4-204ENST00000559327 DPCR1Q3MIW9 517 aa21.4■■□□□ 1.02
IGDCC4-204ENST00000559327 FAM83BQ5T0W9 1011 aa21.4■■□□□ 1.02
IGDCC4-204ENST00000559327 LRFN2Q9ULH4 789 aa21.4■■□□□ 1.02
IGDCC4-204ENST00000559327 NBPF26B4DH59 902 aa21.4■■□□□ 1.02
IGDCC4-204ENST00000559327 CCNE1P24864 410 aa21.4■■□□□ 1.02
IGDCC4-204ENST00000559327 RINT1Q6NUQ1 792 aa21.4■■□□□ 1.02
IGDCC4-204ENST00000559327 NBPF10Q6P3W6 841 aaKnown RBP21.4■■□□□ 1.02
IGDCC4-204ENST00000559327 NBPF15Q8N660 670 aa21.4■■□□□ 1.02
IGDCC4-204ENST00000559327 GIMAP8Q8ND71 665 aaPredicted RBP21.4■■□□□ 1.02
IGDCC4-204ENST00000559327 RUNDC3BQ96NL0 473 aa21.4■■□□□ 1.02
IGDCC4-204ENST00000559327 I3L4J1 428 aa21.4■■□□□ 1.02
IGDCC4-204ENST00000559327 ADCY8P40145 1251 aa21.4■■□□□ 1.02
IGDCC4-204ENST00000559327 RCSD1Q6JBY9 416 aa21.4■■□□□ 1.02
IGDCC4-204ENST00000559327 PPP4R3CPQ6ZMV5 832 aa21.4■■□□□ 1.02
IGDCC4-204ENST00000559327 EEPD1Q7L9B9 569 aa21.4■■□□□ 1.02
IGDCC4-204ENST00000559327 PODXL2Q9NZ53 605 aa21.4■■□□□ 1.02
IGDCC4-204ENST00000559327 CIB2O75838 187 aa21.39■■□□□ 1.02
IGDCC4-204ENST00000559327 BBOF1Q8ND07 529 aa21.39■■□□□ 1.02
IGDCC4-204ENST00000559327 CERKQ8TCT0 537 aa21.39■■□□□ 1.02
IGDCC4-204ENST00000559327 SNX25Q9H3E2 840 aa21.39■■□□□ 1.02
IGDCC4-204ENST00000559327 BCORL1Q5H9F3 1711 aa21.39■■□□□ 1.02
IGDCC4-204ENST00000559327 KRT12Q99456 494 aa21.39■■□□□ 1.02
IGDCC4-204ENST00000559327 FTOQ9C0B1 505 aaKnown RBP eCLIP21.39■■□□□ 1.02
IGDCC4-204ENST00000559327 IFRD2Q12894 506 aaPredicted RBP21.39■■□□□ 1.01
IGDCC4-204ENST00000559327 ZNF526Q8TF50 670 aaPredicted RBP21.39■■□□□ 1.01
IGDCC4-204ENST00000559327 PAGE5Q96GU1 130 aa21.39■■□□□ 1.01
IGDCC4-204ENST00000559327 TYW1Q9NV66 732 aaKnown RBP21.39■■□□□ 1.01
IGDCC4-204ENST00000559327 PCDHA6Q9UN73 950 aa21.39■■□□□ 1.01
IGDCC4-204ENST00000559327 PCDHA8Q9Y5H6 950 aa21.39■■□□□ 1.01
IGDCC4-204ENST00000559327 A6NJR5 290 aa21.39■■□□□ 1.01
IGDCC4-204ENST00000559327 ZBTB7AO95365 584 aa21.39■■□□□ 1.01
IGDCC4-204ENST00000559327 WRNIP1Q96S55 665 aa21.39■■□□□ 1.01
IGDCC4-204ENST00000559327 DNAJC5Q9H3Z4 198 aa21.39■■□□□ 1.01
IGDCC4-204ENST00000559327 THAP12O43422 761 aa21.39■■□□□ 1.01
IGDCC4-204ENST00000559327 BRD3Q15059 726 aa21.39■■□□□ 1.01
IGDCC4-204ENST00000559327 BSPRYQ5W0U4 402 aa21.39■■□□□ 1.01
IGDCC4-204ENST00000559327 SMYD4Q8IYR2 804 aaPredicted RBP21.39■■□□□ 1.01
IGDCC4-204ENST00000559327 ENOX1Q8TC92 643 aaKnown RBP21.39■■□□□ 1.01
IGDCC4-204ENST00000559327 AIFM3Q96NN9 605 aa21.38■■□□□ 1.01
IGDCC4-204ENST00000559327 MYO1FO00160 1098 aa21.38■■□□□ 1.01
IGDCC4-204ENST00000559327 CLIC2O15247 247 aa21.38■■□□□ 1.01
IGDCC4-204ENST00000559327 ABCB11O95342 1321 aa21.38■■□□□ 1.01
IGDCC4-204ENST00000559327 SNAP25P60880 206 aa21.38■■□□□ 1.01
IGDCC4-204ENST00000559327 GRAMD1CQ8IYS0 662 aa21.38■■□□□ 1.01
IGDCC4-204ENST00000559327 MICALL1Q8N3F8 863 aa21.38■■□□□ 1.01
IGDCC4-204ENST00000559327 SNAP23O00161 211 aa21.38■■□□□ 1.01
IGDCC4-204ENST00000559327 TOB2Q14106 344 aaPredicted RBP21.38■■□□□ 1.01
IGDCC4-204ENST00000559327 GRM4Q14833 912 aa21.38■■□□□ 1.01
IGDCC4-204ENST00000559327 TCP11Q8WWU5 503 aa21.38■■□□□ 1.01
IGDCC4-204ENST00000559327 TSC1Q92574 1164 aa21.38■■□□□ 1.01
IGDCC4-204ENST00000559327 PCIF1Q9H4Z3 704 aa21.38■■□□□ 1.01
IGDCC4-204ENST00000559327 ZHX2Q9Y6X8 837 aa21.38■■□□□ 1.01
IGDCC4-204ENST00000559327 ETF1P62495 437 aaKnown RBP21.37■■□□□ 1.01
IGDCC4-204ENST00000559327 LRRC63Q05C16 580 aa21.37■■□□□ 1.01
IGDCC4-204ENST00000559327 BFSP1Q12934 665 aa21.37■■□□□ 1.01
IGDCC4-204ENST00000559327 FAM170AA1A519 330 aa21.37■■□□□ 1.01
IGDCC4-204ENST00000559327 MED7O43513 233 aa21.37■■□□□ 1.01
IGDCC4-204ENST00000559327 IGSF3O75054 1194 aa21.37■■□□□ 1.01
IGDCC4-204ENST00000559327 GBP1P32455 592 aa21.37■■□□□ 1.01
IGDCC4-204ENST00000559327 MKRN3Q13064 507 aaKnown RBP21.37■■□□□ 1.01
IGDCC4-204ENST00000559327 ORC2Q13416 577 aaPredicted RBP21.37■■□□□ 1.01
IGDCC4-204ENST00000559327 KRT71Q3SY84 523 aa21.37■■□□□ 1.01
IGDCC4-204ENST00000559327 NEXMIFQ5QGS0 1516 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms