RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 MYCLP12524 364 aaPredicted RBP16.83■□□□□ 0.28
SNRPA1-207ENST00000559309 FAM173BQ6P4H8 233 aa16.83■□□□□ 0.28
SNRPA1-207ENST00000559309 FBXO16Q8IX29 292 aaPredicted RBP16.83■□□□□ 0.28
SNRPA1-207ENST00000559309 ARMC5Q96C12 935 aa16.83■□□□□ 0.28
SNRPA1-207ENST00000559309 MTMR9Q96QG7 549 aa16.83■□□□□ 0.28
SNRPA1-207ENST00000559309 SENP7Q9BQF6 1050 aa16.83■□□□□ 0.28
SNRPA1-207ENST00000559309 WDR11Q9BZH6 1224 aa16.83■□□□□ 0.28
SNRPA1-207ENST00000559309 KCNH7Q9NS40 1196 aa16.83■□□□□ 0.28
SNRPA1-207ENST00000559309 CHMP5Q9NZZ3 219 aa16.83■□□□□ 0.28
SNRPA1-207ENST00000559309 DDX41Q9UJV9 622 aaKnown RBP16.83■□□□□ 0.28
SNRPA1-207ENST00000559309 PCDHB6Q9Y5E3 794 aa16.83■□□□□ 0.28
SNRPA1-207ENST00000559309 BRCA2P51587 3418 aa16.82■□□□□ 0.28
SNRPA1-207ENST00000559309 FIBPO43427 364 aa16.82■□□□□ 0.28
SNRPA1-207ENST00000559309 ARP10275 920 aa16.82■□□□□ 0.28
SNRPA1-207ENST00000559309 KCNA2P16389 499 aa16.82■□□□□ 0.28
SNRPA1-207ENST00000559309 NASPP49321 788 aaPredicted RBP16.82■□□□□ 0.28
SNRPA1-207ENST00000559309 SETQ01105 290 aaPredicted RBP16.82■□□□□ 0.28
SNRPA1-207ENST00000559309 SP2Q02086 613 aa16.82■□□□□ 0.28
SNRPA1-207ENST00000559309 PTPAQ15257 358 aa16.82■□□□□ 0.28
SNRPA1-207ENST00000559309 LETM2Q2VYF4 491 aa16.82■□□□□ 0.28
SNRPA1-207ENST00000559309 TTC38Q5R3I4 469 aa16.82■□□□□ 0.28
SNRPA1-207ENST00000559309 MFSD14CQ5VZR4 134 aa16.82■□□□□ 0.28
SNRPA1-207ENST00000559309 ATL3Q6DD88 541 aa16.82■□□□□ 0.28
SNRPA1-207ENST00000559309 KCNV1Q6PIU1 500 aa16.82■□□□□ 0.28
SNRPA1-207ENST00000559309 HAS1Q92839 578 aa16.82■□□□□ 0.28
SNRPA1-207ENST00000559309 SLC5A5Q92911 643 aa16.82■□□□□ 0.28
SNRPA1-207ENST00000559309 ZFP91Q96JP5 570 aaPredicted RBP16.82■□□□□ 0.28
SNRPA1-207ENST00000559309 CDHR1Q96JP9 859 aa16.82■□□□□ 0.28
SNRPA1-207ENST00000559309 PDGFCQ9NRA1 345 aa16.82■□□□□ 0.28
SNRPA1-207ENST00000559309 RTEL1Q9NZ71 1219 aa16.82■□□□□ 0.28
SNRPA1-207ENST00000559309 NOL7Q9UMY1 257 aaKnown RBP16.82■□□□□ 0.28
SNRPA1-207ENST00000559309 GNEQ9Y223 722 aaKnown RBP16.82■□□□□ 0.28
SNRPA1-207ENST00000559309 NFASCO94856 1347 aa16.81■□□□□ 0.28
SNRPA1-207ENST00000559309 MSH4O15457 936 aa16.81■□□□□ 0.28
SNRPA1-207ENST00000559309 CCNT1O60563 726 aaKnown RBP16.81■□□□□ 0.28
SNRPA1-207ENST00000559309 ATP9AO75110 1047 aa16.81■□□□□ 0.28
SNRPA1-207ENST00000559309 INHAP05111 366 aa16.81■□□□□ 0.28
SNRPA1-207ENST00000559309 PRKAR2AP13861 404 aaKnown RBP16.81■□□□□ 0.28
SNRPA1-207ENST00000559309 MTMR1Q13613 665 aa16.81■□□□□ 0.28
SNRPA1-207ENST00000559309 GNL2Q13823 731 aaKnown RBP16.81■□□□□ 0.28
SNRPA1-207ENST00000559309 NBR1Q14596 966 aa16.81■□□□□ 0.28
SNRPA1-207ENST00000559309 GNPTABQ3T906 1256 aa16.81■□□□□ 0.28
SNRPA1-207ENST00000559309 DUSP28Q4G0W2 176 aa16.81■□□□□ 0.28
SNRPA1-207ENST00000559309 PRAMEF19Q5SWL8 479 aa16.81■□□□□ 0.28
SNRPA1-207ENST00000559309 TMEM63BQ5T3F8 832 aa16.81■□□□□ 0.28
SNRPA1-207ENST00000559309 IQSEC1Q6DN90 963 aa16.81■□□□□ 0.28
SNRPA1-207ENST00000559309 NLRX1Q86UT6 975 aa16.81■□□□□ 0.28
SNRPA1-207ENST00000559309 SCFD2Q8WU76 684 aa16.81■□□□□ 0.28
SNRPA1-207ENST00000559309 EMID1Q96A84 441 aaPredicted RBP16.81■□□□□ 0.28
SNRPA1-207ENST00000559309 AGO4Q9HCK5 861 aaKnown RBP16.81■□□□□ 0.28
SNRPA1-207ENST00000559309 POLR3EQ9NVU0 708 aa16.81■□□□□ 0.28
SNRPA1-207ENST00000559309 DAXXQ9UER7 740 aaPredicted RBP16.81■□□□□ 0.28
SNRPA1-207ENST00000559309 CNPY2Q9Y2B0 182 aa16.81■□□□□ 0.28
SNRPA1-207ENST00000559309 DOCK5Q9H7D0 1870 aa16.8■□□□□ 0.28
SNRPA1-207ENST00000559309 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.8■□□□□ 0.28
SNRPA1-207ENST00000559309 SEPT4O43236 478 aa16.8■□□□□ 0.28
SNRPA1-207ENST00000559309 PSMD10O75832 226 aa16.8■□□□□ 0.28
SNRPA1-207ENST00000559309 ATP2C1P98194 919 aaPredicted RBP16.8■□□□□ 0.28
SNRPA1-207ENST00000559309 SPIRE1Q08AE8 756 aa16.8■□□□□ 0.28
SNRPA1-207ENST00000559309 ITGB3BPQ13352 177 aaPredicted RBP16.8■□□□□ 0.28
SNRPA1-207ENST00000559309 CCDC144BQ3MJ40 725 aa16.8■□□□□ 0.28
SNRPA1-207ENST00000559309 CLEC17AQ6ZS10 378 aa16.8■□□□□ 0.28
SNRPA1-207ENST00000559309 PLA2G4DQ86XP0 818 aa16.8■□□□□ 0.28
SNRPA1-207ENST00000559309 ZNF333Q96JL9 665 aa16.8■□□□□ 0.28
SNRPA1-207ENST00000559309 USP28Q96RU2 1077 aa16.8■□□□□ 0.28
SNRPA1-207ENST00000559309 TMEM60Q9H2L4 133 aa16.8■□□□□ 0.28
SNRPA1-207ENST00000559309 PAK6Q9NQU5 681 aaPredicted RBP16.8■□□□□ 0.28
SNRPA1-207ENST00000559309 DDX25Q9UHL0 483 aaKnown RBP16.8■□□□□ 0.28
SNRPA1-207ENST00000559309 Q9Y3F1 56 aa16.8■□□□□ 0.28
SNRPA1-207ENST00000559309 TCHHQ07283 1943 aa16.79■□□□□ 0.28
SNRPA1-207ENST00000559309 LAD1O00515 517 aa16.79■□□□□ 0.28
SNRPA1-207ENST00000559309 NKRFO15226 690 aaKnown RBP eCLIP16.79■□□□□ 0.28
SNRPA1-207ENST00000559309 CTAGE5O15320 804 aa16.79■□□□□ 0.28
SNRPA1-207ENST00000559309 HOXD8P13378 290 aaPredicted RBP16.79■□□□□ 0.28
SNRPA1-207ENST00000559309 SMPD1P17405 629 aa16.79■□□□□ 0.28
SNRPA1-207ENST00000559309 UBA1P22314 1058 aaKnown RBP16.79■□□□□ 0.28
SNRPA1-207ENST00000559309 CCND3P30281 292 aaPredicted RBP16.79■□□□□ 0.28
SNRPA1-207ENST00000559309 PRPHP41219 470 aa16.79■□□□□ 0.28
SNRPA1-207ENST00000559309 ADCYAP1R1P41586 468 aa16.79■□□□□ 0.28
SNRPA1-207ENST00000559309 PRR16Q569H4 304 aa16.79■□□□□ 0.28
SNRPA1-207ENST00000559309 LHX8Q68G74 356 aa16.79■□□□□ 0.28
SNRPA1-207ENST00000559309 EEPD1Q7L9B9 569 aa16.79■□□□□ 0.28
SNRPA1-207ENST00000559309 SH3TC2Q8TF17 1288 aa16.79■□□□□ 0.28
SNRPA1-207ENST00000559309 FAM20AQ96MK3 541 aa16.79■□□□□ 0.28
SNRPA1-207ENST00000559309 RIT2Q99578 217 aa16.79■□□□□ 0.28
SNRPA1-207ENST00000559309 BCAS3Q9H6U6 928 aa16.79■□□□□ 0.28
SNRPA1-207ENST00000559309 IPO5O00410 1097 aaKnown RBP16.78■□□□□ 0.28
SNRPA1-207ENST00000559309 NEMFO60524 1076 aa16.78■□□□□ 0.28
SNRPA1-207ENST00000559309 AKR1A1P14550 325 aa16.78■□□□□ 0.28
SNRPA1-207ENST00000559309 ARHGAP1Q07960 439 aa16.78■□□□□ 0.28
SNRPA1-207ENST00000559309 TTLL4Q14679 1199 aa16.78■□□□□ 0.28
SNRPA1-207ENST00000559309 SLC39A14Q15043 492 aa16.78■□□□□ 0.28
SNRPA1-207ENST00000559309 ZNF174Q15697 407 aa16.78■□□□□ 0.28
SNRPA1-207ENST00000559309 ANO1Q5XXA6 986 aa16.78■□□□□ 0.28
SNRPA1-207ENST00000559309 SEPT14Q6ZU15 432 aa16.78■□□□□ 0.28
SNRPA1-207ENST00000559309 FTOQ9C0B1 505 aaKnown RBP eCLIP16.78■□□□□ 0.28
SNRPA1-207ENST00000559309 UPF3AQ9H1J1 476 aaKnown RBP16.78■□□□□ 0.28
SNRPA1-207ENST00000559309 VAV3Q9UKW4 847 aa16.78■□□□□ 0.28
SNRPA1-207ENST00000559309 FAM184BQ9ULE4 1060 aa16.78■□□□□ 0.28
SNRPA1-207ENST00000559309 CLIC4Q9Y696 253 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms