RNA–Protein interactions for RNA: ENST00000559281.5

TPM1-218, Transcript of tropomyosin 1, humanhuman

TSL 5 BASIC

Gene TPM1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-218ENST00000559281 MFSD10Q14728 455 aa20.45■□□□□ 0.86
TPM1-218ENST00000559281 GDF6Q6KF10 455 aaPredicted RBP20.45■□□□□ 0.86
TPM1-218ENST00000559281 CMTR1Q8N1G2 835 aaKnown RBP20.45■□□□□ 0.86
TPM1-218ENST00000559281 MYLIPQ8WY64 445 aa20.45■□□□□ 0.86
TPM1-218ENST00000559281 INPP4AQ96PE3 977 aaPredicted RBP20.45■□□□□ 0.86
TPM1-218ENST00000559281 ALG1Q9BT22 464 aa20.45■□□□□ 0.86
TPM1-218ENST00000559281 RBM28Q9NW13 759 aaKnown RBP20.45■□□□□ 0.86
TPM1-218ENST00000559281 GTF2IRD1Q9UHL9 959 aa20.45■□□□□ 0.86
TPM1-218ENST00000559281 MEIS2O14770 477 aa20.44■□□□□ 0.86
TPM1-218ENST00000559281 FIBPO43427 364 aa20.44■□□□□ 0.86
TPM1-218ENST00000559281 PARNO95453 639 aaKnown RBP20.44■□□□□ 0.86
TPM1-218ENST00000559281 FOSL2P15408 326 aa20.44■□□□□ 0.86
TPM1-218ENST00000559281 UBA1P22314 1058 aaKnown RBP20.44■□□□□ 0.86
TPM1-218ENST00000559281 ICAM3P32942 547 aa20.44■□□□□ 0.86
TPM1-218ENST00000559281 MRPS9P82933 396 aaKnown RBP20.44■□□□□ 0.86
TPM1-218ENST00000559281 SP2Q02086 613 aa20.44■□□□□ 0.86
TPM1-218ENST00000559281 KIAA0753Q2KHM9 967 aa20.44■□□□□ 0.86
TPM1-218ENST00000559281 HSDL1Q3SXM5 330 aa20.44■□□□□ 0.86
TPM1-218ENST00000559281 USP17L6PQ6QN14 398 aa20.44■□□□□ 0.86
TPM1-218ENST00000559281 TMTC3Q6ZXV5 915 aa20.44■□□□□ 0.86
TPM1-218ENST00000559281 MICU3Q86XE3 530 aa20.44■□□□□ 0.86
TPM1-218ENST00000559281 CCDC82Q8N4S0 544 aa20.44■□□□□ 0.86
TPM1-218ENST00000559281 ZFP91Q96JP5 570 aaPredicted RBP20.44■□□□□ 0.86
TPM1-218ENST00000559281 FTOQ9C0B1 505 aaKnown RBP eCLIP20.44■□□□□ 0.86
TPM1-218ENST00000559281 RTEL1Q9NZ71 1219 aa20.44■□□□□ 0.86
TPM1-218ENST00000559281 HDAC6Q9UBN7 1215 aa20.44■□□□□ 0.86
TPM1-218ENST00000559281 FRMPD4Q14CM0 1322 aa20.44■□□□□ 0.86
TPM1-218ENST00000559281 SPATA31C2B4DYI2 1134 aa20.43■□□□□ 0.86
TPM1-218ENST00000559281 HAS3O00219 553 aa20.43■□□□□ 0.86
TPM1-218ENST00000559281 NOP56O00567 594 aaKnown RBP20.43■□□□□ 0.86
TPM1-218ENST00000559281 ZNF286BP0CG31 522 aa20.43■□□□□ 0.86
TPM1-218ENST00000559281 EXOSC10Q01780 885 aaKnown RBP20.43■□□□□ 0.86
TPM1-218ENST00000559281 COL9A3Q14050 684 aaPredicted RBP20.43■□□□□ 0.86
TPM1-218ENST00000559281 GRIN2CQ14957 1233 aa20.43■□□□□ 0.86
TPM1-218ENST00000559281 PCNX4Q63HM2 1172 aa20.43■□□□□ 0.86
TPM1-218ENST00000559281 NLRX1Q86UT6 975 aa20.43■□□□□ 0.86
TPM1-218ENST00000559281 AFAP1L1Q8TED9 768 aa20.43■□□□□ 0.86
TPM1-218ENST00000559281 SLC28A3Q9HAS3 691 aa20.43■□□□□ 0.86
TPM1-218ENST00000559281 LAMA2P24043 3122 aaKnown RBP20.42■□□□□ 0.86
TPM1-218ENST00000559281 SORBS3O60504 671 aa20.42■□□□□ 0.86
TPM1-218ENST00000559281 PBX2P40425 430 aa20.42■□□□□ 0.86
TPM1-218ENST00000559281 FGD1P98174 961 aa20.42■□□□□ 0.86
TPM1-218ENST00000559281 APOA5Q6Q788 366 aa20.42■□□□□ 0.86
TPM1-218ENST00000559281 METTL7BQ6UX53 244 aa20.42■□□□□ 0.86
TPM1-218ENST00000559281 RAB11FIP4Q86YS3 637 aa20.42■□□□□ 0.86
TPM1-218ENST00000559281 MAFAQ8NHW3 353 aaPredicted RBP20.42■□□□□ 0.86
TPM1-218ENST00000559281 USP26Q9BXU7 913 aa20.42■□□□□ 0.86
TPM1-218ENST00000559281 SCN10AQ9Y5Y9 1956 aa20.42■□□□□ 0.86
TPM1-218ENST00000559281 BAZ2BQ9UIF8 2168 aaKnown RBP20.42■□□□□ 0.86
TPM1-218ENST00000559281 MYH6P13533 1939 aa20.41■□□□□ 0.86
TPM1-218ENST00000559281 ZBTB43O43298 467 aa20.41■□□□□ 0.86
TPM1-218ENST00000559281 SELPP16109 830 aa20.41■□□□□ 0.86
TPM1-218ENST00000559281 ATP2A2P16615 1042 aaKnown RBP20.41■□□□□ 0.86
TPM1-218ENST00000559281 PTK7Q13308 1070 aa20.41■□□□□ 0.86
TPM1-218ENST00000559281 RASEFQ8IZ41 740 aa20.41■□□□□ 0.86
TPM1-218ENST00000559281 GIMAP8Q8ND71 665 aaPredicted RBP20.41■□□□□ 0.86
TPM1-218ENST00000559281 GPKOWQ92917 476 aaPredicted RBP eCLIP20.41■□□□□ 0.86
TPM1-218ENST00000559281 VWCEQ96DN2 955 aa20.41■□□□□ 0.86
TPM1-218ENST00000559281 CDHR1Q96JP9 859 aa20.41■□□□□ 0.86
TPM1-218ENST00000559281 SENP7Q9BQF6 1050 aa20.41■□□□□ 0.86
TPM1-218ENST00000559281 SPDYE3A6NKU9 549 aa20.4■□□□□ 0.86
TPM1-218ENST00000559281 H3BRB1 525 aa20.4■□□□□ 0.86
TPM1-218ENST00000559281 RBL2Q08999 1139 aa20.4■□□□□ 0.86
TPM1-218ENST00000559281 RTN1Q16799 776 aa20.4■□□□□ 0.86
TPM1-218ENST00000559281 LRRC8DQ7L1W4 858 aa20.4■□□□□ 0.86
TPM1-218ENST00000559281 CYFIP1Q7L576 1253 aa20.4■□□□□ 0.86
TPM1-218ENST00000559281 HEATR3Q7Z4Q2 680 aa20.4■□□□□ 0.86
TPM1-218ENST00000559281 TEX2Q8IWB9 1127 aa20.4■□□□□ 0.86
TPM1-218ENST00000559281 PHOSPHO2Q8TCD6 241 aa20.4■□□□□ 0.86
TPM1-218ENST00000559281 GAS2L1Q99501 681 aaPredicted RBP20.4■□□□□ 0.86
TPM1-218ENST00000559281 C16orf70Q9BSU1 422 aa20.4■□□□□ 0.86
TPM1-218ENST00000559281 TUT1Q9H6E5 874 aaKnown RBP20.4■□□□□ 0.86
TPM1-218ENST00000559281 EHMT1Q9H9B1 1298 aa20.4■□□□□ 0.86
TPM1-218ENST00000559281 PCDHA11Q9Y5I1 949 aa20.4■□□□□ 0.86
TPM1-218ENST00000559281 hCG_1642624A0A1W2PR95 340 aa20.39■□□□□ 0.85
TPM1-218ENST00000559281 DLL1O00548 723 aa20.39■□□□□ 0.85
TPM1-218ENST00000559281 ADCK5Q3MIX3 580 aa20.39■□□□□ 0.85
TPM1-218ENST00000559281 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.39■□□□□ 0.85
TPM1-218ENST00000559281 TCEANC2Q96MN5 208 aa20.39■□□□□ 0.85
TPM1-218ENST00000559281 CTAGE1Q96RT6 745 aa20.39■□□□□ 0.85
TPM1-218ENST00000559281 SLC9A7Q96T83 725 aa20.39■□□□□ 0.85
TPM1-218ENST00000559281 COL6A3P12111 3177 aa20.38■□□□□ 0.85
TPM1-218ENST00000559281 BAIAP3O94812 1187 aa20.38■□□□□ 0.85
TPM1-218ENST00000559281 LGALS2P05162 132 aa20.38■□□□□ 0.85
TPM1-218ENST00000559281 NEFLP07196 543 aa20.38■□□□□ 0.85
TPM1-218ENST00000559281 CKBP12277 381 aa20.38■□□□□ 0.85
TPM1-218ENST00000559281 RCAN1P53805 252 aa20.38■□□□□ 0.85
TPM1-218ENST00000559281 GPRASP2Q96D09 838 aa20.38■□□□□ 0.85
TPM1-218ENST00000559281 NKX2-4Q9H2Z4 354 aa20.38■□□□□ 0.85
TPM1-218ENST00000559281 BRPF3Q9ULD4 1205 aa20.38■□□□□ 0.85
TPM1-218ENST00000559281 V9GY48 417 aaPredicted RBP20.38■□□□□ 0.85
TPM1-218ENST00000559281 KLF18A0A0U1RQI7 1052 aa20.37■□□□□ 0.85
TPM1-218ENST00000559281 CCDC196A0A1B0GTZ2 297 aa20.37■□□□□ 0.85
TPM1-218ENST00000559281 C17orf102A2RUQ5 167 aa20.37■□□□□ 0.85
TPM1-218ENST00000559281 GOLGA8AA7E2F4 631 aa20.37■□□□□ 0.85
TPM1-218ENST00000559281 GOLGA8BA8MQT2 603 aa20.37■□□□□ 0.85
TPM1-218ENST00000559281 KIF28PB7ZC32 967 aa20.37■□□□□ 0.85
TPM1-218ENST00000559281 hCG_1984214I3L0E3 225 aa20.37■□□□□ 0.85
TPM1-218ENST00000559281 MAFGO15525 162 aa20.37■□□□□ 0.85
TPM1-218ENST00000559281 REC8O95072 547 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms