RNA–Protein interactions for RNA: ENST00000559080.1

CHRNA3-205, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 4

Gene CHRNA3, Length 535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-205ENST00000559080 TRIM71Q2Q1W2 868 aaKnown RBP13.08□□□□□ -0.32
CHRNA3-205ENST00000559080 GPATCH4Q5T3I0 446 aaKnown RBP13.08□□□□□ -0.32
CHRNA3-205ENST00000559080 PNMA1Q8ND90 353 aa13.08□□□□□ -0.32
CHRNA3-205ENST00000559080 WNT8BQ93098 351 aa13.08□□□□□ -0.32
CHRNA3-205ENST00000559080 ZSCAN10Q96SZ4 725 aaPredicted RBP13.08□□□□□ -0.32
CHRNA3-205ENST00000559080 HDAC6Q9UBN7 1215 aa13.08□□□□□ -0.32
CHRNA3-205ENST00000559080 PNMA2Q9UL42 364 aa13.08□□□□□ -0.32
CHRNA3-205ENST00000559080 COL4A6Q14031 1691 aa13.08□□□□□ -0.32
CHRNA3-205ENST00000559080 C5orf42Q9H799 3197 aa13.07□□□□□ -0.32
CHRNA3-205ENST00000559080 SNHG28P0DPA3 235 aa13.07□□□□□ -0.32
CHRNA3-205ENST00000559080 IKBKEQ14164 716 aa13.07□□□□□ -0.32
CHRNA3-205ENST00000559080 LY6KQ17RY6 165 aa13.07□□□□□ -0.32
CHRNA3-205ENST00000559080 FAM117BQ6P1L5 589 aa13.07□□□□□ -0.32
CHRNA3-205ENST00000559080 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.07□□□□□ -0.32
CHRNA3-205ENST00000559080 CENPQQ7L2Z9 268 aaPredicted RBP13.07□□□□□ -0.32
CHRNA3-205ENST00000559080 ENAHQ8N8S7 591 aaPredicted RBP13.07□□□□□ -0.32
CHRNA3-205ENST00000559080 SP7Q8TDD2 431 aaPredicted RBP13.07□□□□□ -0.32
CHRNA3-205ENST00000559080 MRPL38Q96DV4 380 aaKnown RBP13.07□□□□□ -0.32
CHRNA3-205ENST00000559080 UIMC1Q96RL1 719 aa13.07□□□□□ -0.32
CHRNA3-205ENST00000559080 U3KPZ7 1027 aaPredicted RBP13.07□□□□□ -0.32
CHRNA3-205ENST00000559080 WDR19Q8NEZ3 1342 aa13.07□□□□□ -0.32
CHRNA3-205ENST00000559080 KMT2EQ8IZD2 1858 aa13.06□□□□□ -0.32
CHRNA3-205ENST00000559080 LOXHD1Q8IVV2 1947 aa13.06□□□□□ -0.32
CHRNA3-205ENST00000559080 H3BQ06 376 aaPredicted RBP13.06□□□□□ -0.32
CHRNA3-205ENST00000559080 HAS3O00219 553 aa13.06□□□□□ -0.32
CHRNA3-205ENST00000559080 SGSM2O43147 1006 aa13.06□□□□□ -0.32
CHRNA3-205ENST00000559080 DCXO43602 365 aa13.06□□□□□ -0.32
CHRNA3-205ENST00000559080 EFCAB14O75071 495 aa13.06□□□□□ -0.32
CHRNA3-205ENST00000559080 HTRA4P83105 476 aaPredicted RBP13.06□□□□□ -0.32
CHRNA3-205ENST00000559080 HIC1Q14526 733 aa13.06□□□□□ -0.32
CHRNA3-205ENST00000559080 COL19A1Q14993 1142 aa13.06□□□□□ -0.32
CHRNA3-205ENST00000559080 ASPRV1Q53RT3 343 aa13.06□□□□□ -0.32
CHRNA3-205ENST00000559080 ZNF618Q5T7W0 954 aa13.06□□□□□ -0.32
CHRNA3-205ENST00000559080 RALYLQ86SE5 291 aaKnown RBP13.06□□□□□ -0.32
CHRNA3-205ENST00000559080 FBXO22Q8NEZ5 403 aa13.06□□□□□ -0.32
CHRNA3-205ENST00000559080 TBC1D5Q92609 795 aa13.06□□□□□ -0.32
CHRNA3-205ENST00000559080 ANKS1AQ92625 1134 aa13.06□□□□□ -0.32
CHRNA3-205ENST00000559080 MPHOSPH6Q99547 160 aaKnown RBP13.06□□□□□ -0.32
CHRNA3-205ENST00000559080 KCNH6Q9H252 994 aa13.06□□□□□ -0.32
CHRNA3-205ENST00000559080 ZSWIM5Q9P217 1185 aa13.06□□□□□ -0.32
CHRNA3-205ENST00000559080 INSL6Q9Y581 213 aa13.06□□□□□ -0.32
CHRNA3-205ENST00000559080 KIAA1671Q9BY89 1806 aa13.06□□□□□ -0.32
CHRNA3-205ENST00000559080 C19orf67A6NJJ6 358 aa13.05□□□□□ -0.32
CHRNA3-205ENST00000559080 GH1P01241 217 aa13.05□□□□□ -0.32
CHRNA3-205ENST00000559080 GOLGA8HP0CJ92 632 aa13.05□□□□□ -0.32
CHRNA3-205ENST00000559080 CASTP20810 708 aaKnown RBP13.05□□□□□ -0.32
CHRNA3-205ENST00000559080 PTH1RQ03431 593 aa13.05□□□□□ -0.32
CHRNA3-205ENST00000559080 ZP2Q05996 745 aa13.05□□□□□ -0.32
CHRNA3-205ENST00000559080 PTK7Q13308 1070 aa13.05□□□□□ -0.32
CHRNA3-205ENST00000559080 CSPP1Q1MSJ5 1256 aa13.05□□□□□ -0.32
CHRNA3-205ENST00000559080 PUS10Q3MIT2 529 aaKnown RBP13.05□□□□□ -0.32
CHRNA3-205ENST00000559080 IFIT1BQ5T764 474 aaKnown RBP13.05□□□□□ -0.32
CHRNA3-205ENST00000559080 RGS22Q8NE09 1264 aa13.05□□□□□ -0.32
CHRNA3-205ENST00000559080 COL20A1Q9P218 1284 aa13.05□□□□□ -0.32
CHRNA3-205ENST00000559080 TRIOO75962 3097 aa13.04□□□□□ -0.32
CHRNA3-205ENST00000559080 DHX16O60231 1041 aaKnown RBP13.04□□□□□ -0.32
CHRNA3-205ENST00000559080 LGR5O75473 907 aa13.04□□□□□ -0.32
CHRNA3-205ENST00000559080 F2P00734 622 aa13.04□□□□□ -0.32
CHRNA3-205ENST00000559080 CYP21A2P08686 494 aa13.04□□□□□ -0.32
CHRNA3-205ENST00000559080 PARP1P09874 1014 aaKnown RBP13.04□□□□□ -0.32
CHRNA3-205ENST00000559080 PSEN2P49810 448 aa13.04□□□□□ -0.32
CHRNA3-205ENST00000559080 ZNF200P98182 395 aaPredicted RBP13.04□□□□□ -0.32
CHRNA3-205ENST00000559080 EPC2Q52LR7 807 aa13.04□□□□□ -0.32
CHRNA3-205ENST00000559080 SEPT14Q6ZU15 432 aa13.04□□□□□ -0.32
CHRNA3-205ENST00000559080 CHST3Q7LGC8 479 aa13.04□□□□□ -0.32
CHRNA3-205ENST00000559080 DBF4BQ8NFT6 615 aa13.04□□□□□ -0.32
CHRNA3-205ENST00000559080 PABPC5Q96DU9 382 aaKnown RBP13.04□□□□□ -0.32
CHRNA3-205ENST00000559080 TAAR1Q96RJ0 339 aa13.04□□□□□ -0.32
CHRNA3-205ENST00000559080 ALG1Q9BT22 464 aa13.04□□□□□ -0.32
CHRNA3-205ENST00000559080 DDX41Q9UJV9 622 aaKnown RBP13.04□□□□□ -0.32
CHRNA3-205ENST00000559080 ERICH2A1L162 156 aa13.03□□□□□ -0.32
CHRNA3-205ENST00000559080 B4DLN1 442 aa13.03□□□□□ -0.32
CHRNA3-205ENST00000559080 H3BNC9 293 aa13.03□□□□□ -0.32
CHRNA3-205ENST00000559080 LTBRP36941 435 aa13.03□□□□□ -0.32
CHRNA3-205ENST00000559080 MRPL12P52815 198 aaKnown RBP13.03□□□□□ -0.32
CHRNA3-205ENST00000559080 MFSD10Q14728 455 aa13.03□□□□□ -0.32
CHRNA3-205ENST00000559080 SART3Q15020 963 aaKnown RBP13.03□□□□□ -0.32
CHRNA3-205ENST00000559080 CDC37Q16543 378 aaPredicted RBP13.03□□□□□ -0.32
CHRNA3-205ENST00000559080 DGKDQ16760 1214 aa13.03□□□□□ -0.32
CHRNA3-205ENST00000559080 KIAA0753Q2KHM9 967 aa13.03□□□□□ -0.32
CHRNA3-205ENST00000559080 USH1GQ495M9 461 aa13.03□□□□□ -0.32
CHRNA3-205ENST00000559080 TCEAL5Q5H9L2 206 aa13.03□□□□□ -0.32
CHRNA3-205ENST00000559080 HFE2Q6ZVN8 426 aa13.03□□□□□ -0.32
CHRNA3-205ENST00000559080 MYOCDQ8IZQ8 938 aa13.03□□□□□ -0.32
CHRNA3-205ENST00000559080 C7orf31Q8N865 590 aa13.03□□□□□ -0.32
CHRNA3-205ENST00000559080 BANK1Q8NDB2 785 aa13.03□□□□□ -0.32
CHRNA3-205ENST00000559080 SYTL5Q8TDW5 730 aaPredicted RBP13.03□□□□□ -0.32
CHRNA3-205ENST00000559080 EMID1Q96A84 441 aaPredicted RBP13.03□□□□□ -0.32
CHRNA3-205ENST00000559080 SNX27Q96L92 541 aa13.03□□□□□ -0.32
CHRNA3-205ENST00000559080 UBA5Q9GZZ9 404 aa13.03□□□□□ -0.32
CHRNA3-205ENST00000559080 PRKAG3Q9UGI9 489 aa13.03□□□□□ -0.32
CHRNA3-205ENST00000559080 TTC3P53804 2025 aa13.03□□□□□ -0.32
CHRNA3-205ENST00000559080 ZNF286BP0CG31 522 aa13.02□□□□□ -0.33
CHRNA3-205ENST00000559080 HOXD8P13378 290 aaPredicted RBP13.02□□□□□ -0.33
CHRNA3-205ENST00000559080 IRS1P35568 1242 aa13.02□□□□□ -0.33
CHRNA3-205ENST00000559080 TIGD5Q53EQ6 642 aa13.02□□□□□ -0.33
CHRNA3-205ENST00000559080 PLEKHG4Q58EX7 1191 aa13.02□□□□□ -0.33
CHRNA3-205ENST00000559080 CYB5R4Q7L1T6 521 aa13.02□□□□□ -0.33
CHRNA3-205ENST00000559080 NCOA7Q8NI08 942 aa13.02□□□□□ -0.33
CHRNA3-205ENST00000559080 SAMD11Q96NU1 681 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms