RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 MAFBQ9Y5Q3 323 aaPredicted RBP9.1□□□□□ -0.95
SPG11-213ENST00000558988 ARAP2Q8WZ64 1704 aa9.1□□□□□ -0.95
SPG11-213ENST00000558988 HOXA5P20719 270 aa9.09□□□□□ -0.95
SPG11-213ENST00000558988 RFX5P48382 616 aaPredicted RBP9.09□□□□□ -0.95
SPG11-213ENST00000558988 TNNI2P48788 182 aa9.09□□□□□ -0.95
SPG11-213ENST00000558988 RARSP54136 660 aaKnown RBP9.09□□□□□ -0.95
SPG11-213ENST00000558988 PRR23BQ6ZRT6 265 aa9.09□□□□□ -0.95
SPG11-213ENST00000558988 DYMQ7RTS9 669 aa9.09□□□□□ -0.95
SPG11-213ENST00000558988 GPR152Q8TDT2 470 aa9.09□□□□□ -0.95
SPG11-213ENST00000558988 TBC1D22AQ8WUA7 517 aa9.09□□□□□ -0.95
SPG11-213ENST00000558988 WNK4Q96J92 1243 aa9.09□□□□□ -0.95
SPG11-213ENST00000558988 R3HDMLQ9H3Y0 253 aa9.09□□□□□ -0.95
SPG11-213ENST00000558988 TNNQ9UQP3 1299 aa9.09□□□□□ -0.95
SPG11-213ENST00000558988 MYH13Q9UKX3 1938 aa9.09□□□□□ -0.95
SPG11-213ENST00000558988 KIF16BQ96L93 1317 aa9.08□□□□□ -0.96
SPG11-213ENST00000558988 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.08□□□□□ -0.96
SPG11-213ENST00000558988 MANSC4A6NHS7 340 aaPredicted RBP9.08□□□□□ -0.96
SPG11-213ENST00000558988 USP2O75604 605 aaPredicted RBP9.08□□□□□ -0.96
SPG11-213ENST00000558988 ADORA1P30542 326 aa9.08□□□□□ -0.96
SPG11-213ENST00000558988 TM4SF4P48230 202 aa9.08□□□□□ -0.96
SPG11-213ENST00000558988 HNRNPUQ00839 825 aaKnown RBP eCLIP9.08□□□□□ -0.96
SPG11-213ENST00000558988 CYP27C1Q4G0S4 372 aa9.08□□□□□ -0.96
SPG11-213ENST00000558988 SLC23A3Q6PIS1 610 aa9.08□□□□□ -0.96
SPG11-213ENST00000558988 ATG9AQ7Z3C6 839 aa9.08□□□□□ -0.96
SPG11-213ENST00000558988 ANKRD13AQ8IZ07 590 aa9.08□□□□□ -0.96
SPG11-213ENST00000558988 TRMT2AQ8IZ69 625 aaKnown RBP9.08□□□□□ -0.96
SPG11-213ENST00000558988 BSNDQ8WZ55 320 aa9.08□□□□□ -0.96
SPG11-213ENST00000558988 LPIN2Q92539 896 aa9.08□□□□□ -0.96
SPG11-213ENST00000558988 RELTQ969Z4 430 aa9.08□□□□□ -0.96
SPG11-213ENST00000558988 OPTNQ96CV9 577 aa9.08□□□□□ -0.96
SPG11-213ENST00000558988 SOX17Q9H6I2 414 aaPredicted RBP9.08□□□□□ -0.96
SPG11-213ENST00000558988 MAST3O60307 1309 aa9.07□□□□□ -0.96
SPG11-213ENST00000558988 OTOFQ9HC10 1997 aa9.07□□□□□ -0.96
SPG11-213ENST00000558988 NPIPB6E9PJ23 425 aa9.07□□□□□ -0.96
SPG11-213ENST00000558988 IGF2BP3O00425 579 aaKnown RBP eCLIP9.07□□□□□ -0.96
SPG11-213ENST00000558988 NFIBO00712 420 aa9.07□□□□□ -0.96
SPG11-213ENST00000558988 SRGAP3O43295 1099 aa9.07□□□□□ -0.96
SPG11-213ENST00000558988 FKTNO75072 461 aa9.07□□□□□ -0.96
SPG11-213ENST00000558988 BCAR3O75815 825 aa9.07□□□□□ -0.96
SPG11-213ENST00000558988 CT47B1P0C2W7 299 aaPredicted RBP9.07□□□□□ -0.96
SPG11-213ENST00000558988 FGFR2P21802 821 aa9.07□□□□□ -0.96
SPG11-213ENST00000558988 PHKA1P46020 1223 aa9.07□□□□□ -0.96
SPG11-213ENST00000558988 TCP10Q12799 353 aa9.07□□□□□ -0.96
SPG11-213ENST00000558988 TEPSINQ96N21 525 aa9.07□□□□□ -0.96
SPG11-213ENST00000558988 PRDM7Q9NQW5 492 aa9.07□□□□□ -0.96
SPG11-213ENST00000558988 GNL3LQ9NVN8 582 aaKnown RBP9.07□□□□□ -0.96
SPG11-213ENST00000558988 HDAC5Q9UQL6 1122 aa9.07□□□□□ -0.96
SPG11-213ENST00000558988 CSADQ9Y600 493 aa9.07□□□□□ -0.96
SPG11-213ENST00000558988 U3KQE9 123 aa9.07□□□□□ -0.96
SPG11-213ENST00000558988 AK9Q5TCS8 1911 aa9.06□□□□□ -0.96
SPG11-213ENST00000558988 LDHBP07195 334 aaKnown RBP9.06□□□□□ -0.96
SPG11-213ENST00000558988 ZBTB48P10074 688 aaPredicted RBP9.06□□□□□ -0.96
SPG11-213ENST00000558988 PRDX5P30044 214 aa9.06□□□□□ -0.96
SPG11-213ENST00000558988 ZAP70P43403 619 aa9.06□□□□□ -0.96
SPG11-213ENST00000558988 GSTM4Q03013 218 aa9.06□□□□□ -0.96
SPG11-213ENST00000558988 VGLL4Q14135 290 aa9.06□□□□□ -0.96
SPG11-213ENST00000558988 MAP3K11Q16584 847 aa9.06□□□□□ -0.96
SPG11-213ENST00000558988 DBX2Q6ZNG2 339 aa9.06□□□□□ -0.96
SPG11-213ENST00000558988 MIGA2Q7L4E1 593 aa9.06□□□□□ -0.96
SPG11-213ENST00000558988 WDR66Q8TBY9 1149 aa9.06□□□□□ -0.96
SPG11-213ENST00000558988 ZDHHC15Q96MV8 337 aa9.06□□□□□ -0.96
SPG11-213ENST00000558988 NEUROD6Q96NK8 337 aa9.06□□□□□ -0.96
SPG11-213ENST00000558988 WRNIP1Q96S55 665 aa9.06□□□□□ -0.96
SPG11-213ENST00000558988 DAGLAQ9Y4D2 1042 aa9.06□□□□□ -0.96
SPG11-213ENST00000558988 CCL15-CCL14A0A0B4J2E2 113 aa9.05□□□□□ -0.96
SPG11-213ENST00000558988 IPO8O15397 1037 aaKnown RBP9.05□□□□□ -0.96
SPG11-213ENST00000558988 CIAO1O76071 339 aa9.05□□□□□ -0.96
SPG11-213ENST00000558988 GNAI3P08754 354 aa9.05□□□□□ -0.96
SPG11-213ENST00000558988 TRIM27P14373 513 aa9.05□□□□□ -0.96
SPG11-213ENST00000558988 IL15P40933 162 aaPredicted RBP9.05□□□□□ -0.96
SPG11-213ENST00000558988 TIMM10P62072 90 aa9.05□□□□□ -0.96
SPG11-213ENST00000558988 HDLBPQ00341 1268 aaKnown RBP9.05□□□□□ -0.96
SPG11-213ENST00000558988 TFCP2Q12800 502 aa9.05□□□□□ -0.96
SPG11-213ENST00000558988 CRHR2Q13324 411 aa9.05□□□□□ -0.96
SPG11-213ENST00000558988 CCL15Q16663 113 aa9.05□□□□□ -0.96
SPG11-213ENST00000558988 OTUD7BQ6GQQ9 843 aa9.05□□□□□ -0.96
SPG11-213ENST00000558988 APOBEC3HQ6NTF7 200 aaKnown RBP9.05□□□□□ -0.96
SPG11-213ENST00000558988 DZIP1Q86YF9 867 aaKnown RBP9.05□□□□□ -0.96
SPG11-213ENST00000558988 TMEM102Q8N9M5 508 aaPredicted RBP9.05□□□□□ -0.96
SPG11-213ENST00000558988 CD99L2Q8TCZ2 262 aa9.05□□□□□ -0.96
SPG11-213ENST00000558988 ZKSCAN4Q969J2 545 aaPredicted RBP9.05□□□□□ -0.96
SPG11-213ENST00000558988 NXPE3Q969Y0 559 aa9.05□□□□□ -0.96
SPG11-213ENST00000558988 ABCF2Q9UG63 623 aa9.05□□□□□ -0.96
SPG11-213ENST00000558988 TRIM17Q9Y577 477 aa9.05□□□□□ -0.96
SPG11-213ENST00000558988 FAM196BA6NMK8 535 aa9.04□□□□□ -0.96
SPG11-213ENST00000558988 TNFRSF10BO14763 440 aa9.04□□□□□ -0.96
SPG11-213ENST00000558988 INHBEP58166 350 aa9.04□□□□□ -0.96
SPG11-213ENST00000558988 TAF1CQ15572 869 aaPredicted RBP9.04□□□□□ -0.96
SPG11-213ENST00000558988 GORABQ5T7V8 394 aa9.04□□□□□ -0.96
SPG11-213ENST00000558988 FYB2Q5VWT5 728 aa9.04□□□□□ -0.96
SPG11-213ENST00000558988 DIEXFQ68CQ4 756 aaKnown RBP9.04□□□□□ -0.96
SPG11-213ENST00000558988 INTS3Q68E01 1043 aaKnown RBP9.04□□□□□ -0.96
SPG11-213ENST00000558988 CDC42EP5Q6NZY7 148 aa9.04□□□□□ -0.96
SPG11-213ENST00000558988 C16orf46Q6P387 395 aa9.04□□□□□ -0.96
SPG11-213ENST00000558988 ATF7IPQ6VMQ6 1270 aa9.04□□□□□ -0.96
SPG11-213ENST00000558988 ZSCAN29Q8IWY8 852 aaPredicted RBP9.04□□□□□ -0.96
SPG11-213ENST00000558988 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.04□□□□□ -0.96
SPG11-213ENST00000558988 C1orf115Q9H7X2 142 aa9.04□□□□□ -0.96
SPG11-213ENST00000558988 USP40Q9NVE5 1235 aa9.04□□□□□ -0.96
SPG11-213ENST00000558988 DENND2AQ9ULE3 1009 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms