RNA–Protein interactions for RNA: ENST00000558970.2

GABPB1-208, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5

Gene GABPB1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-208ENST00000558970 SLC37A4O43826 429 aa14.12□□□□□ -0.15
GABPB1-208ENST00000558970 EDIL3O43854 480 aa14.12□□□□□ -0.15
GABPB1-208ENST00000558970 AKR1A1P14550 325 aa14.12□□□□□ -0.15
GABPB1-208ENST00000558970 SMPD1P17405 629 aa14.12□□□□□ -0.15
GABPB1-208ENST00000558970 MCM7P33993 719 aa14.12□□□□□ -0.15
GABPB1-208ENST00000558970 IRX5P78411 483 aaPredicted RBP14.12□□□□□ -0.15
GABPB1-208ENST00000558970 TNFAIP2Q03169 654 aa14.12□□□□□ -0.15
GABPB1-208ENST00000558970 CEP55Q53EZ4 464 aa14.12□□□□□ -0.15
GABPB1-208ENST00000558970 MAP3K21Q5TCX8 1036 aa14.12□□□□□ -0.15
GABPB1-208ENST00000558970 TEX2Q8IWB9 1127 aa14.12□□□□□ -0.15
GABPB1-208ENST00000558970 SCFD2Q8WU76 684 aa14.12□□□□□ -0.15
GABPB1-208ENST00000558970 INPP4AQ96PE3 977 aaPredicted RBP14.12□□□□□ -0.15
GABPB1-208ENST00000558970 DEFB118Q96PH6 123 aa14.12□□□□□ -0.15
GABPB1-208ENST00000558970 BCAS3Q9H6U6 928 aa14.12□□□□□ -0.15
GABPB1-208ENST00000558970 DDX25Q9UHL0 483 aaKnown RBP14.12□□□□□ -0.15
GABPB1-208ENST00000558970 FAM184BQ9ULE4 1060 aa14.12□□□□□ -0.15
GABPB1-208ENST00000558970 NOL7Q9UMY1 257 aaKnown RBP14.12□□□□□ -0.15
GABPB1-208ENST00000558970 UBIAD1Q9Y5Z9 338 aa14.12□□□□□ -0.15
GABPB1-208ENST00000558970 BRCA2P51587 3418 aa14.12□□□□□ -0.15
GABPB1-208ENST00000558970 WDR81Q562E7 1941 aa14.11□□□□□ -0.15
GABPB1-208ENST00000558970 SEPT4O43236 478 aa14.11□□□□□ -0.15
GABPB1-208ENST00000558970 CYP3A4P08684 503 aa14.11□□□□□ -0.15
GABPB1-208ENST00000558970 ZSCAN22P10073 491 aaPredicted RBP14.11□□□□□ -0.15
GABPB1-208ENST00000558970 USP11P51784 963 aa14.11□□□□□ -0.15
GABPB1-208ENST00000558970 SP2Q02086 613 aa14.11□□□□□ -0.15
GABPB1-208ENST00000558970 RESTQ13127 1097 aa14.11□□□□□ -0.15
GABPB1-208ENST00000558970 SEMA3FQ13275 785 aa14.11□□□□□ -0.15
GABPB1-208ENST00000558970 TTLL4Q14679 1199 aa14.11□□□□□ -0.15
GABPB1-208ENST00000558970 ZNF174Q15697 407 aa14.11□□□□□ -0.15
GABPB1-208ENST00000558970 TTC38Q5R3I4 469 aa14.11□□□□□ -0.15
GABPB1-208ENST00000558970 XRRA1Q6P2D8 792 aa14.11□□□□□ -0.15
GABPB1-208ENST00000558970 POTEDQ86YR6 584 aa14.11□□□□□ -0.15
GABPB1-208ENST00000558970 JADE2Q9NQC1 790 aa14.11□□□□□ -0.15
GABPB1-208ENST00000558970 KCNH7Q9NS40 1196 aa14.11□□□□□ -0.15
GABPB1-208ENST00000558970 TCHHQ07283 1943 aa14.11□□□□□ -0.15
GABPB1-208ENST00000558970 IGLV3-22A0A075B6J6 115 aa14.1□□□□□ -0.15
GABPB1-208ENST00000558970 FIBPO43427 364 aa14.1□□□□□ -0.15
GABPB1-208ENST00000558970 MARCH6O60337 910 aa14.1□□□□□ -0.15
GABPB1-208ENST00000558970 ATP9AO75110 1047 aa14.1□□□□□ -0.15
GABPB1-208ENST00000558970 STAM2O75886 525 aa14.1□□□□□ -0.15
GABPB1-208ENST00000558970 GGPS1O95749 300 aa14.1□□□□□ -0.15
GABPB1-208ENST00000558970 F13A1P00488 732 aa14.1□□□□□ -0.15
GABPB1-208ENST00000558970 PGK1P00558 417 aa14.1□□□□□ -0.15
GABPB1-208ENST00000558970 RARBP10826 455 aa14.1□□□□□ -0.15
GABPB1-208ENST00000558970 UBA1P22314 1058 aaKnown RBP14.1□□□□□ -0.15
GABPB1-208ENST00000558970 TOB1P50616 345 aaPredicted RBP14.1□□□□□ -0.15
GABPB1-208ENST00000558970 CEBPZQ03701 1054 aaKnown RBP14.1□□□□□ -0.15
GABPB1-208ENST00000558970 CYFIP1Q7L576 1253 aa14.1□□□□□ -0.15
GABPB1-208ENST00000558970 TLK2Q86UE8 772 aa14.1□□□□□ -0.15
GABPB1-208ENST00000558970 OR6J1Q8NGC5 347 aa14.1□□□□□ -0.15
GABPB1-208ENST00000558970 ARMC5Q96C12 935 aa14.1□□□□□ -0.15
GABPB1-208ENST00000558970 GPRASP2Q96D09 838 aa14.1□□□□□ -0.15
GABPB1-208ENST00000558970 IPO9Q96P70 1041 aaKnown RBP14.1□□□□□ -0.15
GABPB1-208ENST00000558970 FTOQ9C0B1 505 aaKnown RBP eCLIP14.1□□□□□ -0.15
GABPB1-208ENST00000558970 DDX20Q9UHI6 824 aaKnown RBP14.1□□□□□ -0.15
GABPB1-208ENST00000558970 NRBP1Q9UHY1 535 aa14.1□□□□□ -0.15
GABPB1-208ENST00000558970 DDX41Q9UJV9 622 aaKnown RBP14.1□□□□□ -0.15
GABPB1-208ENST00000558970 PCDHB6Q9Y5E3 794 aa14.1□□□□□ -0.15
GABPB1-208ENST00000558970 SPATA31C2B4DYI2 1134 aa14.09□□□□□ -0.15
GABPB1-208ENST00000558970 MEIS1O00470 390 aa14.09□□□□□ -0.15
GABPB1-208ENST00000558970 DYNC1LI2O43237 492 aaPredicted RBP14.09□□□□□ -0.15
GABPB1-208ENST00000558970 NEMFO60524 1076 aa14.09□□□□□ -0.15
GABPB1-208ENST00000558970 BEX3Q00994 111 aa14.09□□□□□ -0.15
GABPB1-208ENST00000558970 SETQ01105 290 aaPredicted RBP14.09□□□□□ -0.15
GABPB1-208ENST00000558970 MYSM1Q5VVJ2 828 aa14.09□□□□□ -0.15
GABPB1-208ENST00000558970 IQSEC1Q6DN90 963 aa14.09□□□□□ -0.15
GABPB1-208ENST00000558970 BRAPQ7Z569 592 aa14.09□□□□□ -0.15
GABPB1-208ENST00000558970 LENG9Q96B70 501 aa14.09□□□□□ -0.15
GABPB1-208ENST00000558970 CHAMP1Q96JM3 812 aa14.09□□□□□ -0.15
GABPB1-208ENST00000558970 ZNF577Q9BSK1 485 aa14.09□□□□□ -0.15
GABPB1-208ENST00000558970 AGO4Q9HCK5 861 aaKnown RBP14.09□□□□□ -0.15
GABPB1-208ENST00000558970 XPNPEP3Q9NQH7 507 aa14.09□□□□□ -0.15
GABPB1-208ENST00000558970 ZDHHC9Q9Y397 364 aa14.09□□□□□ -0.15
GABPB1-208ENST00000558970 TELO2Q9Y4R8 837 aa14.09□□□□□ -0.15
GABPB1-208ENST00000558970 SYNRGQ9UMZ2 1314 aa14.09□□□□□ -0.15
GABPB1-208ENST00000558970 RBM47A0AV96 593 aaKnown RBP14.08□□□□□ -0.16
GABPB1-208ENST00000558970 MYADML2A6NDP7 307 aa14.08□□□□□ -0.16
GABPB1-208ENST00000558970 IPO5O00410 1097 aaKnown RBP14.08□□□□□ -0.16
GABPB1-208ENST00000558970 MSH4O15457 936 aa14.08□□□□□ -0.16
GABPB1-208ENST00000558970 CHMP2AO43633 222 aa14.08□□□□□ -0.16
GABPB1-208ENST00000558970 C6orf222P0C671 652 aaPredicted RBP14.08□□□□□ -0.16
GABPB1-208ENST00000558970 CIITAP33076 1130 aa14.08□□□□□ -0.16
GABPB1-208ENST00000558970 ITGB3BPQ13352 177 aaPredicted RBP14.08□□□□□ -0.16
GABPB1-208ENST00000558970 DUSP28Q4G0W2 176 aa14.08□□□□□ -0.16
GABPB1-208ENST00000558970 CCDC62Q6P9F0 684 aa14.08□□□□□ -0.16
GABPB1-208ENST00000558970 DHX37Q8IY37 1157 aaKnown RBP14.08□□□□□ -0.16
GABPB1-208ENST00000558970 CDHR1Q96JP9 859 aa14.08□□□□□ -0.16
GABPB1-208ENST00000558970 TMEM106CQ9BVX2 250 aa14.08□□□□□ -0.16
GABPB1-208ENST00000558970 AP5M1Q9H0R1 490 aa14.08□□□□□ -0.16
GABPB1-208ENST00000558970 MLXIPQ9HAP2 919 aa14.08□□□□□ -0.16
GABPB1-208ENST00000558970 PAK6Q9NQU5 681 aaPredicted RBP14.08□□□□□ -0.16
GABPB1-208ENST00000558970 CYP3A7-CYP3A51PA0A087WV96 503 aa14.07□□□□□ -0.16
GABPB1-208ENST00000558970 BRD1O95696 1058 aa14.07□□□□□ -0.16
GABPB1-208ENST00000558970 GH1P01241 217 aa14.07□□□□□ -0.16
GABPB1-208ENST00000558970 GCFC2P16383 781 aaKnown RBP14.07□□□□□ -0.16
GABPB1-208ENST00000558970 KCNA2P16389 499 aa14.07□□□□□ -0.16
GABPB1-208ENST00000558970 CYP3A7P24462 503 aa14.07□□□□□ -0.16
GABPB1-208ENST00000558970 ICAM3P32942 547 aa14.07□□□□□ -0.16
GABPB1-208ENST00000558970 CHMP4BP1P59074 171 aa14.07□□□□□ -0.16
GABPB1-208ENST00000558970 CALCRLQ16602 461 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms