RNA–Protein interactions for RNA: ENST00000558924.1

SEC11A-206, Transcript of SEC11 homolog A, signal peptidase complex subunit, humanhuman

TSL 1 (best)

Gene SEC11A, Length 3,626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC11A-206ENST00000558924 CLRN2A0PK11 232 aa13.4□□□□□ -0.26
SEC11A-206ENST00000558924 CPP00450 1065 aa13.4□□□□□ -0.26
SEC11A-206ENST00000558924 TM4SF1P30408 202 aa13.4□□□□□ -0.26
SEC11A-206ENST00000558924 IRAK1P51617 712 aa13.4□□□□□ -0.26
SEC11A-206ENST00000558924 BIRC2Q13490 618 aa13.4□□□□□ -0.26
SEC11A-206ENST00000558924 PDXDC2PQ6P474 469 aa13.4□□□□□ -0.26
SEC11A-206ENST00000558924 SLF2Q8IX21 1173 aa13.4□□□□□ -0.26
SEC11A-206ENST00000558924 NUDT12Q9BQG2 462 aa13.4□□□□□ -0.26
SEC11A-206ENST00000558924 SERPINB13Q9UIV8 391 aa13.4□□□□□ -0.26
SEC11A-206ENST00000558924 KIAA1024Q9UPX6 916 aa13.4□□□□□ -0.26
SEC11A-206ENST00000558924 RCCD1A6NED2 376 aa13.39□□□□□ -0.27
SEC11A-206ENST00000558924 SFI1A8K8P3 1242 aa13.39□□□□□ -0.27
SEC11A-206ENST00000558924 NKRFO15226 690 aaKnown RBP eCLIP13.39□□□□□ -0.27
SEC11A-206ENST00000558924 SLC37A4O43826 429 aa13.39□□□□□ -0.27
SEC11A-206ENST00000558924 APBA1Q02410 837 aa13.39□□□□□ -0.27
SEC11A-206ENST00000558924 PRR16Q569H4 304 aa13.39□□□□□ -0.27
SEC11A-206ENST00000558924 RBM26Q5T8P6 1007 aaKnown RBP13.39□□□□□ -0.27
SEC11A-206ENST00000558924 RWDD2AQ9UIY3 292 aa13.39□□□□□ -0.27
SEC11A-206ENST00000558924 ZBTB21Q9ULJ3 1066 aa13.39□□□□□ -0.27
SEC11A-206ENST00000558924 NFU1Q9UMS0 254 aa13.39□□□□□ -0.27
SEC11A-206ENST00000558924 PDE2AO00408 941 aaPredicted RBP13.39□□□□□ -0.27
SEC11A-206ENST00000558924 PRPF6O94906 941 aaKnown RBP13.39□□□□□ -0.27
SEC11A-206ENST00000558924 RDXP35241 583 aaKnown RBP13.39□□□□□ -0.27
SEC11A-206ENST00000558924 SATB1Q01826 763 aa13.39□□□□□ -0.27
SEC11A-206ENST00000558924 CKAP4Q07065 602 aaKnown RBP13.39□□□□□ -0.27
SEC11A-206ENST00000558924 RAPGEF1Q13905 1077 aa13.39□□□□□ -0.27
SEC11A-206ENST00000558924 CFAP58Q5T655 872 aa13.39□□□□□ -0.27
SEC11A-206ENST00000558924 LRCH2Q5VUJ6 765 aa13.39□□□□□ -0.27
SEC11A-206ENST00000558924 EGFL6Q8IUX8 553 aa13.39□□□□□ -0.27
SEC11A-206ENST00000558924 MB21D1Q8N884 522 aa13.39□□□□□ -0.27
SEC11A-206ENST00000558924 CCDC43Q96MW1 224 aaKnown RBP13.39□□□□□ -0.27
SEC11A-206ENST00000558924 SCLT1Q96NL6 688 aa13.39□□□□□ -0.27
SEC11A-206ENST00000558924 RAB21Q9UL25 225 aa13.39□□□□□ -0.27
SEC11A-206ENST00000558924 BCS1LQ9Y276 419 aa13.39□□□□□ -0.27
SEC11A-206ENST00000558924 AFF2P51816 1311 aa13.39□□□□□ -0.27
SEC11A-206ENST00000558924 E9PMD0 336 aa13.39□□□□□ -0.27
SEC11A-206ENST00000558924 DDX39AO00148 427 aaKnown RBP13.39□□□□□ -0.27
SEC11A-206ENST00000558924 PPEF1O14829 653 aaPredicted RBP13.39□□□□□ -0.27
SEC11A-206ENST00000558924 PLCG2P16885 1265 aa13.39□□□□□ -0.27
SEC11A-206ENST00000558924 ATP2B4P23634 1241 aa13.39□□□□□ -0.27
SEC11A-206ENST00000558924 EHHADHQ08426 723 aa13.39□□□□□ -0.27
SEC11A-206ENST00000558924 MKRN4PQ13434 485 aaPredicted RBP13.39□□□□□ -0.27
SEC11A-206ENST00000558924 DCAF17Q5H9S7 520 aaPredicted RBP13.39□□□□□ -0.27
SEC11A-206ENST00000558924 BARGINQ6ZT62 677 aa13.39□□□□□ -0.27
SEC11A-206ENST00000558924 ZFPM1Q8IX07 1006 aa13.39□□□□□ -0.27
SEC11A-206ENST00000558924 RAB34Q9BZG1 259 aa13.39□□□□□ -0.27
SEC11A-206ENST00000558924 HAUS4Q9H6D7 363 aa13.39□□□□□ -0.27
SEC11A-206ENST00000558924 PSTPIP2Q9H939 334 aa13.39□□□□□ -0.27
SEC11A-206ENST00000558924 MED4Q9NPJ6 270 aa13.39□□□□□ -0.27
SEC11A-206ENST00000558924 PCDHA1Q9Y5I3 950 aa13.39□□□□□ -0.27
SEC11A-206ENST00000558924 TOGARAM1Q9Y4F4 1720 aa13.39□□□□□ -0.27
SEC11A-206ENST00000558924 GOLGA6L10A6NI86 522 aa13.38□□□□□ -0.27
SEC11A-206ENST00000558924 H7C1D1 291 aa13.38□□□□□ -0.27
SEC11A-206ENST00000558924 GUCY1A3Q02108 690 aa13.38□□□□□ -0.27
SEC11A-206ENST00000558924 RTFDC1Q9BY42 306 aaPredicted RBP13.38□□□□□ -0.27
SEC11A-206ENST00000558924 EPB41L5Q9HCM4 733 aa13.38□□□□□ -0.27
SEC11A-206ENST00000558924 DDX4Q9NQI0 724 aaKnown RBP13.38□□□□□ -0.27
SEC11A-206ENST00000558924 PCDHA12Q9UN75 941 aa13.38□□□□□ -0.27
SEC11A-206ENST00000558924 LAMB4A4D0S4 1761 aa13.38□□□□□ -0.27
SEC11A-206ENST00000558924 EIF4A3P38919 411 aaKnown RBP13.38□□□□□ -0.27
SEC11A-206ENST00000558924 TRAPPC10P48553 1259 aa13.38□□□□□ -0.27
SEC11A-206ENST00000558924 SLC10A5Q5PT55 438 aa13.38□□□□□ -0.27
SEC11A-206ENST00000558924 HNRNPLLQ8WVV9 542 aaKnown RBP13.38□□□□□ -0.27
SEC11A-206ENST00000558924 ALS2CR12Q96Q35 445 aa13.38□□□□□ -0.27
SEC11A-206ENST00000558924 TCP10L2B9ZVM9 353 aa13.38□□□□□ -0.27
SEC11A-206ENST00000558924 PCP11498 1178 aaKnown RBP13.38□□□□□ -0.27
SEC11A-206ENST00000558924 GYS1P13807 737 aa13.38□□□□□ -0.27
SEC11A-206ENST00000558924 SEC24CP53992 1094 aa13.38□□□□□ -0.27
SEC11A-206ENST00000558924 USP14P54578 494 aa13.38□□□□□ -0.27
SEC11A-206ENST00000558924 GFPT1Q06210 699 aaPredicted RBP13.38□□□□□ -0.27
SEC11A-206ENST00000558924 PABPC4Q13310 644 aaKnown RBP eCLIP13.38□□□□□ -0.272e-7■■■□□ 18.2
SEC11A-206ENST00000558924 E2F5Q15329 346 aa13.38□□□□□ -0.27
SEC11A-206ENST00000558924 CCDC84Q86UT8 332 aaPredicted RBP13.38□□□□□ -0.27
SEC11A-206ENST00000558924 P2RX5Q93086 422 aa13.38□□□□□ -0.27
SEC11A-206ENST00000558924 GJD4Q96KN9 370 aaPredicted RBP13.38□□□□□ -0.27
SEC11A-206ENST00000558924 KRT12Q99456 494 aa13.38□□□□□ -0.27
SEC11A-206ENST00000558924 DDX25Q9UHL0 483 aaKnown RBP13.38□□□□□ -0.27
SEC11A-206ENST00000558924 E7EVH7 732 aa13.37□□□□□ -0.27
SEC11A-206ENST00000558924 IRF6O14896 467 aa13.37□□□□□ -0.27
SEC11A-206ENST00000558924 APBA3O96018 575 aa13.37□□□□□ -0.27
SEC11A-206ENST00000558924 CFBP00751 764 aa13.37□□□□□ -0.27
SEC11A-206ENST00000558924 RPSAP08865 295 aaKnown RBP13.37□□□□□ -0.27
SEC11A-206ENST00000558924 MMP10P09238 476 aa13.37□□□□□ -0.27
SEC11A-206ENST00000558924 IFT88Q13099 833 aa13.37□□□□□ -0.27
SEC11A-206ENST00000558924 NAALADL2Q58DX5 795 aa13.37□□□□□ -0.27
SEC11A-206ENST00000558924 CCDC174Q6PII3 467 aa13.37□□□□□ -0.27
SEC11A-206ENST00000558924 RDH13Q8NBN7 331 aa13.37□□□□□ -0.27
SEC11A-206ENST00000558924 LARP4BQ92615 738 aaKnown RBP13.37□□□□□ -0.27
SEC11A-206ENST00000558924 ARL8AQ96BM9 186 aa13.37□□□□□ -0.27
SEC11A-206ENST00000558924 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.37□□□□□ -0.27
SEC11A-206ENST00000558924 DISP2A7MBM2 1401 aa13.37□□□□□ -0.27
SEC11A-206ENST00000558924 ITGB4P16144 1822 aa13.37□□□□□ -0.27
SEC11A-206ENST00000558924 SPEF2Q9C093 1822 aa13.37□□□□□ -0.27
SEC11A-206ENST00000558924 SBK1Q52WX2 424 aa13.37□□□□□ -0.27
SEC11A-206ENST00000558924 IQCEQ6IPM2 695 aa13.37□□□□□ -0.27
SEC11A-206ENST00000558924 ADGRF4Q8IZF3 695 aa13.37□□□□□ -0.27
SEC11A-206ENST00000558924 MSANTD4Q8NCY6 345 aa13.37□□□□□ -0.27
SEC11A-206ENST00000558924 TRIM9Q9C026 710 aa13.37□□□□□ -0.27
SEC11A-206ENST00000558924 CAPN6Q9Y6Q1 641 aa13.37□□□□□ -0.27
SEC11A-206ENST00000558924 ARHGAP25P42331 645 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms