RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 DGKDQ16760 1214 aa14.41□□□□□ -0.1
SMAD3-208ENST00000558827 HSDL1Q3SXM5 330 aa14.41□□□□□ -0.1
SMAD3-208ENST00000558827 CELF3Q5SZQ8 465 aaKnown RBP14.41□□□□□ -0.1
SMAD3-208ENST00000558827 MYSM1Q5VVJ2 828 aa14.41□□□□□ -0.1
SMAD3-208ENST00000558827 WWC2Q6AWC2 1192 aa14.41□□□□□ -0.1
SMAD3-208ENST00000558827 GDF6Q6KF10 455 aaPredicted RBP14.41□□□□□ -0.1
SMAD3-208ENST00000558827 BLOC1S2Q6QNY1 142 aa14.41□□□□□ -0.1
SMAD3-208ENST00000558827 BRF1Q92994 677 aa14.41□□□□□ -0.1
SMAD3-208ENST00000558827 IL23AQ9NPF7 189 aa14.41□□□□□ -0.1
SMAD3-208ENST00000558827 FAM217BQ9NTX9 383 aaPredicted RBP14.41□□□□□ -0.1
SMAD3-208ENST00000558827 HDAC6Q9UBN7 1215 aa14.41□□□□□ -0.1
SMAD3-208ENST00000558827 TRIP12Q14669 1992 aaPredicted RBP14.41□□□□□ -0.1
SMAD3-208ENST00000558827 SCN5AQ14524 2016 aa14.41□□□□□ -0.1
SMAD3-208ENST00000558827 CNTNAP5Q8WYK1 1306 aa14.41□□□□□ -0.1
SMAD3-208ENST00000558827 PTGISQ16647 500 aa14.4□□□□□ -0.1
SMAD3-208ENST00000558827 TYW1BQ6NUM6 668 aa14.4□□□□□ -0.1
SMAD3-208ENST00000558827 CYFIP1Q7L576 1253 aa14.4□□□□□ -0.1
SMAD3-208ENST00000558827 SAMD3Q8N6K7 520 aa14.4□□□□□ -0.1
SMAD3-208ENST00000558827 KCNB2Q92953 911 aa14.4□□□□□ -0.1
SMAD3-208ENST00000558827 CXXC1Q9P0U4 656 aaPredicted RBP14.4□□□□□ -0.1
SMAD3-208ENST00000558827 ZBBXA8MT70 800 aa14.39□□□□□ -0.11
SMAD3-208ENST00000558827 FGBP02675 491 aa14.39□□□□□ -0.11
SMAD3-208ENST00000558827 SUPT20HL2P0C7V6 817 aa14.39□□□□□ -0.11
SMAD3-208ENST00000558827 PBX2P40425 430 aa14.39□□□□□ -0.11
SMAD3-208ENST00000558827 NAPAP54920 295 aa14.39□□□□□ -0.11
SMAD3-208ENST00000558827 FUT2Q10981 343 aa14.39□□□□□ -0.11
SMAD3-208ENST00000558827 MFSD10Q14728 455 aa14.39□□□□□ -0.11
SMAD3-208ENST00000558827 KIAA0753Q2KHM9 967 aa14.39□□□□□ -0.11
SMAD3-208ENST00000558827 UTP14CQ5TAP6 766 aaKnown RBP14.39□□□□□ -0.11
SMAD3-208ENST00000558827 ZNF697Q5TEC3 545 aa14.39□□□□□ -0.11
SMAD3-208ENST00000558827 NFRKBQ6P4R8 1299 aa14.39□□□□□ -0.11
SMAD3-208ENST00000558827 PPTC7Q8NI37 304 aa14.39□□□□□ -0.11
SMAD3-208ENST00000558827 GUCD1Q96NT3 240 aa14.39□□□□□ -0.11
SMAD3-208ENST00000558827 UIMC1Q96RL1 719 aa14.39□□□□□ -0.11
SMAD3-208ENST00000558827 RBM28Q9NW13 759 aaKnown RBP14.39□□□□□ -0.11
SMAD3-208ENST00000558827 TMEM260Q9NX78 707 aa14.39□□□□□ -0.11
SMAD3-208ENST00000558827 PCDHA6Q9UN73 950 aa14.39□□□□□ -0.11
SMAD3-208ENST00000558827 PCDHA8Q9Y5H6 950 aa14.39□□□□□ -0.11
SMAD3-208ENST00000558827 ADAMTS3O15072 1205 aa14.38□□□□□ -0.11
SMAD3-208ENST00000558827 DTNBO60941 627 aa14.38□□□□□ -0.11
SMAD3-208ENST00000558827 ATP9AO75110 1047 aa14.38□□□□□ -0.11
SMAD3-208ENST00000558827 REC8O95072 547 aa14.38□□□□□ -0.11
SMAD3-208ENST00000558827 HMGB1P09429 215 aaKnown RBP14.38□□□□□ -0.11
SMAD3-208ENST00000558827 RPS6KB1P23443 525 aa14.38□□□□□ -0.11
SMAD3-208ENST00000558827 METAP2P50579 478 aaKnown RBP eCLIP14.38□□□□□ -0.11
SMAD3-208ENST00000558827 CCT2P78371 535 aaKnown RBP14.38□□□□□ -0.11
SMAD3-208ENST00000558827 HIC1Q14526 733 aa14.38□□□□□ -0.11
SMAD3-208ENST00000558827 GNPTABQ3T906 1256 aa14.38□□□□□ -0.11
SMAD3-208ENST00000558827 C7orf31Q8N865 590 aa14.38□□□□□ -0.11
SMAD3-208ENST00000558827 RETREG2Q8NC44 543 aa14.38□□□□□ -0.11
SMAD3-208ENST00000558827 VWCEQ96DN2 955 aa14.38□□□□□ -0.11
SMAD3-208ENST00000558827 TTYH1Q9H313 450 aaPredicted RBP14.38□□□□□ -0.11
SMAD3-208ENST00000558827 SEMA6BQ9H3T3 888 aa14.38□□□□□ -0.11
SMAD3-208ENST00000558827 FRMPD4Q14CM0 1322 aa14.38□□□□□ -0.11
SMAD3-208ENST00000558827 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.37□□□□□ -0.11
SMAD3-208ENST00000558827 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.37□□□□□ -0.11
SMAD3-208ENST00000558827 SPDYE3A6NKU9 549 aa14.37□□□□□ -0.11
SMAD3-208ENST00000558827 SPATA31C2B4DYI2 1134 aa14.37□□□□□ -0.11
SMAD3-208ENST00000558827 PIK3CDO00329 1044 aa14.37□□□□□ -0.11
SMAD3-208ENST00000558827 NOP56O00567 594 aaKnown RBP14.37□□□□□ -0.11
SMAD3-208ENST00000558827 RABGGTBP53611 331 aa14.37□□□□□ -0.11
SMAD3-208ENST00000558827 SMAD3P84022 425 aaKnown RBP14.37□□□□□ -0.11
SMAD3-208ENST00000558827 PCNX4Q63HM2 1172 aa14.37□□□□□ -0.11
SMAD3-208ENST00000558827 GPR153Q6NV75 609 aa14.37□□□□□ -0.11
SMAD3-208ENST00000558827 PSRC1Q6PGN9 363 aaPredicted RBP14.37□□□□□ -0.11
SMAD3-208ENST00000558827 KCNV1Q6PIU1 500 aa14.37□□□□□ -0.11
SMAD3-208ENST00000558827 TRIM50Q86XT4 487 aa14.37□□□□□ -0.11
SMAD3-208ENST00000558827 TET1Q8NFU7 2136 aa14.37□□□□□ -0.11
SMAD3-208ENST00000558827 DHX38Q92620 1227 aaKnown RBP14.37□□□□□ -0.11
SMAD3-208ENST00000558827 PHKBQ93100 1093 aa14.37□□□□□ -0.11
SMAD3-208ENST00000558827 EMID1Q96A84 441 aaPredicted RBP14.37□□□□□ -0.11
SMAD3-208ENST00000558827 INPP4AQ96PE3 977 aaPredicted RBP14.37□□□□□ -0.11
SMAD3-208ENST00000558827 CTAGE1Q96RT6 745 aa14.37□□□□□ -0.11
SMAD3-208ENST00000558827 SEZ6LQ9BYH1 1024 aa14.37□□□□□ -0.11
SMAD3-208ENST00000558827 FTOQ9C0B1 505 aaKnown RBP eCLIP14.37□□□□□ -0.11
SMAD3-208ENST00000558827 NCOA5Q9HCD5 579 aaKnown RBP14.37□□□□□ -0.11
SMAD3-208ENST00000558827 SMCO2A6NFE2 343 aa14.36□□□□□ -0.11
SMAD3-208ENST00000558827 STXBP3O00186 592 aa14.36□□□□□ -0.11
SMAD3-208ENST00000558827 FIBPO43427 364 aa14.36□□□□□ -0.11
SMAD3-208ENST00000558827 PPFIA4O75335 1185 aa14.36□□□□□ -0.11
SMAD3-208ENST00000558827 TGFB3P10600 412 aa14.36□□□□□ -0.11
SMAD3-208ENST00000558827 ITGB5P18084 799 aa14.36□□□□□ -0.11
SMAD3-208ENST00000558827 ICAM3P32942 547 aa14.36□□□□□ -0.11
SMAD3-208ENST00000558827 ADCY7P51828 1080 aa14.36□□□□□ -0.11
SMAD3-208ENST00000558827 JAKMIP3Q5VZ66 844 aa14.36□□□□□ -0.11
SMAD3-208ENST00000558827 NLRX1Q86UT6 975 aa14.36□□□□□ -0.11
SMAD3-208ENST00000558827 CYP2W1Q8TAV3 490 aa14.36□□□□□ -0.11
SMAD3-208ENST00000558827 MYLIPQ8WY64 445 aa14.36□□□□□ -0.11
SMAD3-208ENST00000558827 HERVK_113Q902F9 699 aa14.36□□□□□ -0.11
SMAD3-208ENST00000558827 WNT8BQ93098 351 aa14.36□□□□□ -0.11
SMAD3-208ENST00000558827 CDX2Q99626 313 aaPredicted RBP14.36□□□□□ -0.11
SMAD3-208ENST00000558827 C16orf70Q9BSU1 422 aa14.36□□□□□ -0.11
SMAD3-208ENST00000558827 USP26Q9BXU7 913 aa14.36□□□□□ -0.11
SMAD3-208ENST00000558827 UPF3BQ9BZI7 483 aaKnown RBP14.36□□□□□ -0.11
SMAD3-208ENST00000558827 GTF2IRD1Q9UHL9 959 aa14.36□□□□□ -0.11
SMAD3-208ENST00000558827 HAS3O00219 553 aa14.35□□□□□ -0.11
SMAD3-208ENST00000558827 F2P00734 622 aa14.35□□□□□ -0.11
SMAD3-208ENST00000558827 LGALS2P05162 132 aa14.35□□□□□ -0.11
SMAD3-208ENST00000558827 IQCF3P0C7M6 154 aa14.35□□□□□ -0.11
SMAD3-208ENST00000558827 MYOGP15173 224 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms