RNA–Protein interactions for RNA: ENST00000558790.5

SPG11-212, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 858 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-212ENST00000558790 TEX13BQ9BXU2 312 aa11.56□□□□□ -0.56
SPG11-212ENST00000558790 TANC1Q9C0D5 1861 aa11.56□□□□□ -0.56
SPG11-212ENST00000558790 PRDM12Q9H4Q4 367 aa11.56□□□□□ -0.56
SPG11-212ENST00000558790 STARD7Q9NQZ5 370 aa11.56□□□□□ -0.56
SPG11-212ENST00000558790 TMEM39AQ9NV64 488 aa11.56□□□□□ -0.56
SPG11-212ENST00000558790 ZHX1Q9UKY1 873 aaPredicted RBP11.56□□□□□ -0.56
SPG11-212ENST00000558790 CNPY2Q9Y2B0 182 aa11.56□□□□□ -0.56
SPG11-212ENST00000558790 SLC4A4Q9Y6R1 1079 aa11.56□□□□□ -0.56
SPG11-212ENST00000558790 SPINT1O43278 529 aa11.55□□□□□ -0.56
SPG11-212ENST00000558790 HMMRO75330 724 aa11.55□□□□□ -0.56
SPG11-212ENST00000558790 CTSOP43234 321 aaPredicted RBP11.55□□□□□ -0.56
SPG11-212ENST00000558790 UBE3CQ15386 1083 aa11.55□□□□□ -0.56
SPG11-212ENST00000558790 TMEM31Q5JXX7 168 aa11.55□□□□□ -0.56
SPG11-212ENST00000558790 ESYT1Q9BSJ8 1104 aa11.55□□□□□ -0.56
SPG11-212ENST00000558790 PUS7LQ9H0K6 701 aaKnown RBP11.55□□□□□ -0.56
SPG11-212ENST00000558790 POLMQ9NP87 494 aaPredicted RBP11.55□□□□□ -0.56
SPG11-212ENST00000558790 ARPP21Q9UBL0 812 aaPredicted RBP11.55□□□□□ -0.56
SPG11-212ENST00000558790 TBX21Q9UL17 535 aa11.55□□□□□ -0.56
SPG11-212ENST00000558790 RIPK3Q9Y572 518 aa11.55□□□□□ -0.56
SPG11-212ENST00000558790 ZDBF2Q9HCK1 2354 aa11.54□□□□□ -0.56
SPG11-212ENST00000558790 DNAJC25-GNG10A0A024R161 153 aa11.54□□□□□ -0.56
SPG11-212ENST00000558790 RAB11FIP3O75154 756 aa11.54□□□□□ -0.56
SPG11-212ENST00000558790 SNAI1O95863 264 aaPredicted RBP11.54□□□□□ -0.56
SPG11-212ENST00000558790 NDUFB10O96000 172 aa11.54□□□□□ -0.56
SPG11-212ENST00000558790 KCNA10Q16322 511 aa11.54□□□□□ -0.56
SPG11-212ENST00000558790 CCSAPQ6IQ19 270 aaPredicted RBP11.54□□□□□ -0.56
SPG11-212ENST00000558790 HOMEZQ8IX15 550 aa11.54□□□□□ -0.56
SPG11-212ENST00000558790 RPAP2Q8IXW5 612 aaPredicted RBP11.54□□□□□ -0.56
SPG11-212ENST00000558790 STK11IPQ8N1F8 1099 aa11.54□□□□□ -0.56
SPG11-212ENST00000558790 MSL3Q8N5Y2 521 aaKnown RBP11.54□□□□□ -0.56
SPG11-212ENST00000558790 KLHDC9Q8NEP7 349 aa11.54□□□□□ -0.56
SPG11-212ENST00000558790 NUP133Q8WUM0 1156 aa11.54□□□□□ -0.56
SPG11-212ENST00000558790 FGD4Q96M96 766 aa11.54□□□□□ -0.56
SPG11-212ENST00000558790 ZFP42Q96MM3 310 aa11.54□□□□□ -0.56
SPG11-212ENST00000558790 TOX2Q96NM4 488 aa11.54□□□□□ -0.56
SPG11-212ENST00000558790 HINFPQ9BQA5 517 aa11.54□□□□□ -0.56
SPG11-212ENST00000558790 ZBTB40Q9NUA8 1239 aa11.54□□□□□ -0.56
SPG11-212ENST00000558790 WDR87Q6ZQQ6 2873 aa11.53□□□□□ -0.56
SPG11-212ENST00000558790 DCDC2CA8MYV0 355 aa11.53□□□□□ -0.56
SPG11-212ENST00000558790 LCE2BO14633 110 aa11.53□□□□□ -0.56
SPG11-212ENST00000558790 TIMP1P01033 207 aa11.53□□□□□ -0.56
SPG11-212ENST00000558790 CST5P28325 142 aaPredicted RBP11.53□□□□□ -0.56
SPG11-212ENST00000558790 TLR1Q15399 786 aa11.53□□□□□ -0.56
SPG11-212ENST00000558790 AKNAD1Q5T1N1 836 aa11.53□□□□□ -0.56
SPG11-212ENST00000558790 MAMDC4Q6UXC1 1216 aa11.53□□□□□ -0.56
SPG11-212ENST00000558790 TIFAQ96CG3 184 aa11.53□□□□□ -0.56
SPG11-212ENST00000558790 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.53□□□□□ -0.56
SPG11-212ENST00000558790 ATP13A2Q9NQ11 1180 aa11.53□□□□□ -0.56
SPG11-212ENST00000558790 FAM184BQ9ULE4 1060 aa11.53□□□□□ -0.56
SPG11-212ENST00000558790 DDX19BQ9UMR2 479 aa11.53□□□□□ -0.56
SPG11-212ENST00000558790 PRRC2BQ5JSZ5 2229 aaKnown RBP11.53□□□□□ -0.56
SPG11-212ENST00000558790 BRWD1Q9NSI6 2320 aa11.53□□□□□ -0.56
SPG11-212ENST00000558790 PTPRSQ13332 1948 aa11.52□□□□□ -0.56
SPG11-212ENST00000558790 GRXCR1A8MXD5 290 aa11.52□□□□□ -0.57
SPG11-212ENST00000558790 F5H6K3 240 aa11.52□□□□□ -0.57
SPG11-212ENST00000558790 DUSP11O75319 330 aaKnown RBP11.52□□□□□ -0.57
SPG11-212ENST00000558790 C6orf222P0C671 652 aaPredicted RBP11.52□□□□□ -0.57
SPG11-212ENST00000558790 CENPCQ03188 943 aa11.52□□□□□ -0.57
SPG11-212ENST00000558790 KLRC3Q07444 240 aa11.52□□□□□ -0.57
SPG11-212ENST00000558790 TBCELQ5QJ74 424 aa11.52□□□□□ -0.57
SPG11-212ENST00000558790 FOXD4L5Q5VV16 416 aaPredicted RBP11.52□□□□□ -0.57
SPG11-212ENST00000558790 MFSD5Q6N075 450 aa11.52□□□□□ -0.57
SPG11-212ENST00000558790 CPXCR1Q8N123 301 aa11.52□□□□□ -0.57
SPG11-212ENST00000558790 DDX11Q96FC9 970 aa11.52□□□□□ -0.57
SPG11-212ENST00000558790 GAS2L1Q99501 681 aaPredicted RBP11.52□□□□□ -0.57
SPG11-212ENST00000558790 EPB41L4AQ9HCS5 686 aaPredicted RBP11.52□□□□□ -0.57
SPG11-212ENST00000558790 NYAP2Q9P242 653 aa11.52□□□□□ -0.57
SPG11-212ENST00000558790 HRH3Q9Y5N1 445 aa11.52□□□□□ -0.57
SPG11-212ENST00000558790 DCHS1Q96JQ0 3298 aa11.52□□□□□ -0.57
SPG11-212ENST00000558790 MROH7Q68CQ1 1323 aa11.52□□□□□ -0.57
SPG11-212ENST00000558790 MYH6P13533 1939 aa11.52□□□□□ -0.57
SPG11-212ENST00000558790 TRIP12Q14669 1992 aaPredicted RBP11.51□□□□□ -0.57
SPG11-212ENST00000558790 SCN10AQ9Y5Y9 1956 aa11.51□□□□□ -0.57
SPG11-212ENST00000558790 IGKV6D-41A0A0C4DH26 115 aa11.51□□□□□ -0.57
SPG11-212ENST00000558790 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.51□□□□□ -0.57
SPG11-212ENST00000558790 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.51□□□□□ -0.57
SPG11-212ENST00000558790 GSG1L2A8MUP6 293 aa11.51□□□□□ -0.57
SPG11-212ENST00000558790 BACH1O14867 736 aa11.51□□□□□ -0.57
SPG11-212ENST00000558790 ATP2A1O14983 1001 aa11.51□□□□□ -0.57
SPG11-212ENST00000558790 SMARCA5O60264 1052 aaPredicted RBP11.51□□□□□ -0.57
SPG11-212ENST00000558790 ASGR1P07306 291 aa11.51□□□□□ -0.57
SPG11-212ENST00000558790 ACVR2BQ13705 512 aa11.51□□□□□ -0.57
SPG11-212ENST00000558790 CCDC144BQ3MJ40 725 aa11.51□□□□□ -0.57
SPG11-212ENST00000558790 SBK1Q52WX2 424 aa11.51□□□□□ -0.57
SPG11-212ENST00000558790 ZSCAN25Q6NSZ9 544 aa11.51□□□□□ -0.57
SPG11-212ENST00000558790 C16orf59Q7L2K0 433 aa11.51□□□□□ -0.57
SPG11-212ENST00000558790 ARMCX2Q7L311 632 aa11.51□□□□□ -0.57
SPG11-212ENST00000558790 LRRC47Q8N1G4 583 aaKnown RBP11.51□□□□□ -0.57
SPG11-212ENST00000558790 PRPF38AQ8NAV1 312 aaKnown RBP11.51□□□□□ -0.57
SPG11-212ENST00000558790 KIFC2Q96AC6 838 aa11.51□□□□□ -0.57
SPG11-212ENST00000558790 GLT1D1Q96MS3 346 aa11.51□□□□□ -0.57
SPG11-212ENST00000558790 STRBPQ96SI9 672 aaKnown RBP11.51□□□□□ -0.57
SPG11-212ENST00000558790 PBX4Q9BYU1 374 aa11.51□□□□□ -0.57
SPG11-212ENST00000558790 UPF3AQ9H1J1 476 aaKnown RBP11.51□□□□□ -0.57
SPG11-212ENST00000558790 SLC38A10Q9HBR0 1119 aa11.51□□□□□ -0.57
SPG11-212ENST00000558790 RAVER2Q9HCJ3 691 aaKnown RBP11.51□□□□□ -0.57
SPG11-212ENST00000558790 USP3Q9Y6I4 520 aa11.51□□□□□ -0.57
SPG11-212ENST00000558790 COL4A4P53420 1690 aaPredicted RBP11.51□□□□□ -0.57
SPG11-212ENST00000558790 ELP1O95163 1332 aa11.51□□□□□ -0.57
SPG11-212ENST00000558790 PLIN4Q96Q06 1357 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms