RNA–Protein interactions for RNA: ENST00000558611.1

MARK3-213, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 5

Gene MARK3, Length 687 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-213ENST00000558611 ALDH1B1P30837 517 aa12.21□□□□□ -0.45
MARK3-213ENST00000558611 POLR2BP30876 1174 aaKnown RBP12.21□□□□□ -0.45
MARK3-213ENST00000558611 HOXA10P31260 410 aaPredicted RBP12.21□□□□□ -0.45
MARK3-213ENST00000558611 SLFN5Q08AF3 891 aa12.21□□□□□ -0.45
MARK3-213ENST00000558611 SV2CQ496J9 727 aa12.21□□□□□ -0.45
MARK3-213ENST00000558611 ZBTB37Q5TC79 503 aa12.21□□□□□ -0.45
MARK3-213ENST00000558611 FOXB2Q5VYV0 432 aa12.21□□□□□ -0.45
MARK3-213ENST00000558611 SLC6A19Q695T7 634 aa12.21□□□□□ -0.45
MARK3-213ENST00000558611 KSR2Q6VAB6 950 aa12.21□□□□□ -0.45
MARK3-213ENST00000558611 JAMLQ86YT9 394 aa12.21□□□□□ -0.45
MARK3-213ENST00000558611 MRPL41Q8IXM3 137 aaKnown RBP12.21□□□□□ -0.45
MARK3-213ENST00000558611 SYNE4Q8N205 404 aa12.21□□□□□ -0.45
MARK3-213ENST00000558611 PI4KAP1Q8N8J0 262 aa12.21□□□□□ -0.45
MARK3-213ENST00000558611 TMEM87BQ96K49 555 aa12.21□□□□□ -0.45
MARK3-213ENST00000558611 EXOC2Q96KP1 924 aa12.21□□□□□ -0.45
MARK3-213ENST00000558611 RUSC1Q9BVN2 902 aa12.21□□□□□ -0.45
MARK3-213ENST00000558611 FAN1Q9Y2M0 1017 aa12.21□□□□□ -0.45
MARK3-213ENST00000558611 SUGT1Q9Y2Z0 365 aa12.21□□□□□ -0.45
MARK3-213ENST00000558611 COL4A1P02462 1669 aa12.21□□□□□ -0.45
MARK3-213ENST00000558611 SNED1Q8TER0 1413 aa12.2□□□□□ -0.46
MARK3-213ENST00000558611 TRAV20A0A0B4J274 112 aa12.2□□□□□ -0.46
MARK3-213ENST00000558611 EPXP11678 715 aa12.2□□□□□ -0.46
MARK3-213ENST00000558611 NLRP12P59046 1061 aa12.2□□□□□ -0.46
MARK3-213ENST00000558611 EXOSC10Q01780 885 aaKnown RBP12.2□□□□□ -0.46
MARK3-213ENST00000558611 ID3Q02535 119 aa12.2□□□□□ -0.46
MARK3-213ENST00000558611 CBX2Q14781 532 aaPredicted RBP12.2□□□□□ -0.46
MARK3-213ENST00000558611 SETDB1Q15047 1291 aa12.2□□□□□ -0.46
MARK3-213ENST00000558611 ODR4Q5SWX8 454 aa12.2□□□□□ -0.46
MARK3-213ENST00000558611 CCDC191Q8NCU4 936 aa12.2□□□□□ -0.46
MARK3-213ENST00000558611 JDP2Q8WYK2 163 aa12.2□□□□□ -0.46
MARK3-213ENST00000558611 RBM17Q96I25 401 aaKnown RBP12.2□□□□□ -0.46
MARK3-213ENST00000558611 IPO9Q96P70 1041 aaKnown RBP12.2□□□□□ -0.46
MARK3-213ENST00000558611 APBA2Q99767 749 aa12.2□□□□□ -0.46
MARK3-213ENST00000558611 ARHGEF4Q9NR80 690 aa12.2□□□□□ -0.46
MARK3-213ENST00000558611 MRPS23Q9Y3D9 190 aaKnown RBP12.2□□□□□ -0.46
MARK3-213ENST00000558611 PDE8AO60658 829 aa12.19□□□□□ -0.46
MARK3-213ENST00000558611 L1CAMP32004 1257 aa12.19□□□□□ -0.46
MARK3-213ENST00000558611 CDKN1CP49918 316 aaPredicted RBP12.19□□□□□ -0.46
MARK3-213ENST00000558611 NEXNQ0ZGT2 675 aa12.19□□□□□ -0.46
MARK3-213ENST00000558611 HSP90AA2PQ14568 343 aaPredicted RBP12.19□□□□□ -0.46
MARK3-213ENST00000558611 CCDC93Q567U6 631 aa12.19□□□□□ -0.46
MARK3-213ENST00000558611 PPM1JQ5JR12 505 aa12.19□□□□□ -0.46
MARK3-213ENST00000558611 HID1Q8IV36 788 aa12.19□□□□□ -0.46
MARK3-213ENST00000558611 PHACTR4Q8IZ21 702 aa12.19□□□□□ -0.46
MARK3-213ENST00000558611 ZNF507Q8TCN5 953 aa12.19□□□□□ -0.46
MARK3-213ENST00000558611 FAM89AQ96GI7 184 aa12.19□□□□□ -0.46
MARK3-213ENST00000558611 SLC6A18Q96N87 628 aa12.19□□□□□ -0.46
MARK3-213ENST00000558611 CRAMP1Q96RY5 1269 aa12.19□□□□□ -0.46
MARK3-213ENST00000558611 CDC6Q99741 560 aa12.19□□□□□ -0.46
MARK3-213ENST00000558611 PICK1Q9NRD5 415 aa12.19□□□□□ -0.46
MARK3-213ENST00000558611 CWC25Q9NXE8 425 aaPredicted RBP12.19□□□□□ -0.46
MARK3-213ENST00000558611 RNF181Q9P0P0 153 aa12.19□□□□□ -0.46
MARK3-213ENST00000558611 ABCC4O15439 1325 aa12.18□□□□□ -0.46
MARK3-213ENST00000558611 WDR90Q96KV7 1748 aa12.18□□□□□ -0.46
MARK3-213ENST00000558611 PCCAP05165 728 aaPredicted RBP12.18□□□□□ -0.46
MARK3-213ENST00000558611 IGKV5-2P06315 115 aa12.18□□□□□ -0.46
MARK3-213ENST00000558611 PMLP29590 882 aa12.18□□□□□ -0.46
MARK3-213ENST00000558611 PRELPP51888 382 aa12.18□□□□□ -0.46
MARK3-213ENST00000558611 PPFIBP1Q86W92 1011 aa12.18□□□□□ -0.46
MARK3-213ENST00000558611 SCUBE1Q8IWY4 988 aa12.18□□□□□ -0.46
MARK3-213ENST00000558611 TMEM192Q8IY95 271 aa12.18□□□□□ -0.46
MARK3-213ENST00000558611 TRMT2AQ8IZ69 625 aaKnown RBP12.18□□□□□ -0.46
MARK3-213ENST00000558611 CCDC74BQ96LY2 380 aa12.18□□□□□ -0.46
MARK3-213ENST00000558611 AARSD1Q9BTE6 412 aaKnown RBP12.18□□□□□ -0.46
MARK3-213ENST00000558611 MRPL4Q9BYD3 311 aaKnown RBP12.18□□□□□ -0.46
MARK3-213ENST00000558611 SUSD2Q9UGT4 822 aa12.18□□□□□ -0.46
MARK3-213ENST00000558611 MCM8Q9UJA3 840 aa12.18□□□□□ -0.46
MARK3-213ENST00000558611 MAPRE3Q9UPY8 281 aa12.18□□□□□ -0.46
MARK3-213ENST00000558611 SCN4AP35499 1836 aa12.17□□□□□ -0.46
MARK3-213ENST00000558611 TRBV23-1A0A0A0MS06 115 aa12.17□□□□□ -0.46
MARK3-213ENST00000558611 ALG1L2C9J202 215 aa12.17□□□□□ -0.46
MARK3-213ENST00000558611 CT47A1Q5JQC4 288 aaPredicted RBP12.17□□□□□ -0.46
MARK3-213ENST00000558611 OLFM4Q6UX06 510 aa12.17□□□□□ -0.46
MARK3-213ENST00000558611 RNF180Q86T96 592 aa12.17□□□□□ -0.46
MARK3-213ENST00000558611 GALNT11Q8NCW6 608 aa12.17□□□□□ -0.46
MARK3-213ENST00000558611 DNAAF4Q8WXU2 420 aa12.17□□□□□ -0.46
MARK3-213ENST00000558611 TAOK3Q9H2K8 898 aa12.17□□□□□ -0.46
MARK3-213ENST00000558611 PRDM6Q9NQX0 595 aa12.17□□□□□ -0.46
MARK3-213ENST00000558611 RAD18Q9NS91 495 aa12.17□□□□□ -0.46
MARK3-213ENST00000558611 INTS7Q9NVH2 962 aaKnown RBP12.17□□□□□ -0.46
MARK3-213ENST00000558611 DUOX1Q9NRD9 1551 aa12.17□□□□□ -0.46
MARK3-213ENST00000558611 PSME4Q14997 1843 aa12.16□□□□□ -0.46
MARK3-213ENST00000558611 CDHR2Q9BYE9 1310 aa12.16□□□□□ -0.46
MARK3-213ENST00000558611 M0R082 166 aa12.16□□□□□ -0.46
MARK3-213ENST00000558611 NFKB2Q00653 900 aa12.16□□□□□ -0.46
MARK3-213ENST00000558611 FAM209AQ5JX71 171 aa12.16□□□□□ -0.46
MARK3-213ENST00000558611 DDX46Q7L014 1031 aaKnown RBP12.16□□□□□ -0.46
MARK3-213ENST00000558611 DDX42Q86XP3 938 aaKnown RBP eCLIP12.16□□□□□ -0.46
MARK3-213ENST00000558611 RTKN2Q8IZC4 609 aa12.16□□□□□ -0.46
MARK3-213ENST00000558611 ZNF417Q8TAU3 575 aa12.16□□□□□ -0.46
MARK3-213ENST00000558611 ZNF587Q96SQ5 575 aaPredicted RBP12.16□□□□□ -0.46
MARK3-213ENST00000558611 FAM126AQ9BYI3 521 aaPredicted RBP12.16□□□□□ -0.46
MARK3-213ENST00000558611 GSG1L2A8MUP6 293 aa12.15□□□□□ -0.46
MARK3-213ENST00000558611 TMPRSS2O15393 492 aa12.15□□□□□ -0.46
MARK3-213ENST00000558611 ADAM11O75078 769 aa12.15□□□□□ -0.46
MARK3-213ENST00000558611 UBOX5O94941 541 aa12.15□□□□□ -0.46
MARK3-213ENST00000558611 DLGAP3O95886 979 aa12.15□□□□□ -0.46
MARK3-213ENST00000558611 SF3B3Q15393 1217 aaKnown RBP12.15□□□□□ -0.46
MARK3-213ENST00000558611 EXOSC6Q5RKV6 272 aaKnown RBP12.15□□□□□ -0.46
MARK3-213ENST00000558611 KCT2Q8NC54 265 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms