RNA–Protein interactions for RNA: ENST00000558376.5

RABGGTA-204, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-204ENST00000558376 TSGA10IPQ3SY00 556 aa12.96□□□□□ -0.33
RABGGTA-204ENST00000558376 RUFY3Q7L099 469 aa12.96□□□□□ -0.33
RABGGTA-204ENST00000558376 LRRC8DQ7L1W4 858 aa12.96□□□□□ -0.33
RABGGTA-204ENST00000558376 TBC1D10CQ8IV04 446 aa12.96□□□□□ -0.33
RABGGTA-204ENST00000558376 CAGE1Q8TC20 777 aa12.96□□□□□ -0.33
RABGGTA-204ENST00000558376 SYTL5Q8TDW5 730 aaPredicted RBP12.96□□□□□ -0.33
RABGGTA-204ENST00000558376 MUC6Q6W4X9 2439 aa12.96□□□□□ -0.34
RABGGTA-204ENST00000558376 MYO7AQ13402 2215 aa12.96□□□□□ -0.34
RABGGTA-204ENST00000558376 B4DLN1 442 aa12.95□□□□□ -0.34
RABGGTA-204ENST00000558376 CXCL10P02778 98 aa12.95□□□□□ -0.34
RABGGTA-204ENST00000558376 HOXD11P31277 338 aaPredicted RBP12.95□□□□□ -0.34
RABGGTA-204ENST00000558376 MRPL12P52815 198 aaKnown RBP12.95□□□□□ -0.34
RABGGTA-204ENST00000558376 RBL2Q08999 1139 aa12.95□□□□□ -0.34
RABGGTA-204ENST00000558376 TRAF7Q6Q0C0 670 aa12.95□□□□□ -0.34
RABGGTA-204ENST00000558376 CHST3Q7LGC8 479 aa12.95□□□□□ -0.34
RABGGTA-204ENST00000558376 TMX3Q96JJ7 454 aa12.95□□□□□ -0.34
RABGGTA-204ENST00000558376 ZKSCAN3Q9BRR0 538 aa12.95□□□□□ -0.34
RABGGTA-204ENST00000558376 LRRC2Q9BYS8 371 aa12.95□□□□□ -0.34
RABGGTA-204ENST00000558376 SUGCTQ9HAC7 445 aa12.95□□□□□ -0.34
RABGGTA-204ENST00000558376 C11orf16Q9NQ32 467 aa12.95□□□□□ -0.34
RABGGTA-204ENST00000558376 PDRG1Q9NUG6 133 aa12.95□□□□□ -0.34
RABGGTA-204ENST00000558376 HDAC6Q9UBN7 1215 aa12.95□□□□□ -0.34
RABGGTA-204ENST00000558376 CYP46A1Q9Y6A2 500 aa12.95□□□□□ -0.34
RABGGTA-204ENST00000558376 E7EWF7 191 aa12.95□□□□□ -0.34
RABGGTA-204ENST00000558376 CKBP12277 381 aa12.95□□□□□ -0.34
RABGGTA-204ENST00000558376 TRIM71Q2Q1W2 868 aaKnown RBP12.95□□□□□ -0.34
RABGGTA-204ENST00000558376 CNKSR3Q6P9H4 555 aa12.95□□□□□ -0.34
RABGGTA-204ENST00000558376 CCDC155Q8N6L0 562 aa12.95□□□□□ -0.34
RABGGTA-204ENST00000558376 WNT8BQ93098 351 aa12.95□□□□□ -0.34
RABGGTA-204ENST00000558376 NEK1Q96PY6 1258 aa12.95□□□□□ -0.34
RABGGTA-204ENST00000558376 ZBED2Q9BTP6 218 aa12.95□□□□□ -0.34
RABGGTA-204ENST00000558376 TM6SF1Q9BZW5 370 aa12.95□□□□□ -0.34
RABGGTA-204ENST00000558376 LMCD1Q9NZU5 365 aa12.95□□□□□ -0.34
RABGGTA-204ENST00000558376 GTF2IRD1Q9UHL9 959 aa12.95□□□□□ -0.34
RABGGTA-204ENST00000558376 SIP14410 1827 aa12.95□□□□□ -0.34
RABGGTA-204ENST00000558376 HSP90AA1P07900 732 aaKnown RBP12.94□□□□□ -0.34
RABGGTA-204ENST00000558376 PSEN2P49810 448 aa12.94□□□□□ -0.34
RABGGTA-204ENST00000558376 ERVK-21P61565 698 aa12.94□□□□□ -0.34
RABGGTA-204ENST00000558376 ZNF200P98182 395 aaPredicted RBP12.94□□□□□ -0.34
RABGGTA-204ENST00000558376 CDC37Q16543 378 aaPredicted RBP12.94□□□□□ -0.34
RABGGTA-204ENST00000558376 TMEM31Q5JXX7 168 aa12.94□□□□□ -0.34
RABGGTA-204ENST00000558376 BLOC1S2Q6QNY1 142 aa12.94□□□□□ -0.34
RABGGTA-204ENST00000558376 MFSD6Q6ZSS7 791 aa12.94□□□□□ -0.34
RABGGTA-204ENST00000558376 ALG1Q9BT22 464 aa12.94□□□□□ -0.34
RABGGTA-204ENST00000558376 CTNNA3Q9UI47 895 aa12.94□□□□□ -0.34
RABGGTA-204ENST00000558376 DDX41Q9UJV9 622 aaKnown RBP12.94□□□□□ -0.34
RABGGTA-204ENST00000558376 MTUS1Q9ULD2 1270 aa12.94□□□□□ -0.34
RABGGTA-204ENST00000558376 PIEZO1Q92508 2521 aa12.94□□□□□ -0.34
RABGGTA-204ENST00000558376 ZMYM6O95789 1325 aa12.94□□□□□ -0.34
RABGGTA-204ENST00000558376 LINC01553A4QN01 128 aa12.93□□□□□ -0.34
RABGGTA-204ENST00000558376 FAM86C2PA6NEL3 165 aa12.93□□□□□ -0.34
RABGGTA-204ENST00000558376 ZNF213O14771 459 aa12.93□□□□□ -0.34
RABGGTA-204ENST00000558376 GJB5O95377 273 aa12.93□□□□□ -0.34
RABGGTA-204ENST00000558376 RPS6KB1P23443 525 aa12.93□□□□□ -0.34
RABGGTA-204ENST00000558376 PSMA5P28066 241 aa12.93□□□□□ -0.34
RABGGTA-204ENST00000558376 HIC1Q14526 733 aa12.93□□□□□ -0.34
RABGGTA-204ENST00000558376 MBTPS1Q14703 1052 aa12.93□□□□□ -0.34
RABGGTA-204ENST00000558376 IMMTQ16891 758 aaKnown RBP12.93□□□□□ -0.34
RABGGTA-204ENST00000558376 GPATCH4Q5T3I0 446 aaKnown RBP12.93□□□□□ -0.34
RABGGTA-204ENST00000558376 ADGRF4Q8IZF3 695 aa12.93□□□□□ -0.34
RABGGTA-204ENST00000558376 NSUN6Q8TEA1 469 aaKnown RBP12.93□□□□□ -0.34
RABGGTA-204ENST00000558376 RMDN3Q96TC7 470 aa12.93□□□□□ -0.34
RABGGTA-204ENST00000558376 RAD9AQ99638 391 aa12.93□□□□□ -0.34
RABGGTA-204ENST00000558376 ABCB11O95342 1321 aa12.93□□□□□ -0.34
RABGGTA-204ENST00000558376 NEDD4P46934 1319 aa12.93□□□□□ -0.34
RABGGTA-204ENST00000558376 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.93□□□□□ -0.34
RABGGTA-204ENST00000558376 ABHD14A-ACY1A0A1B0GW23 586 aa12.93□□□□□ -0.34
RABGGTA-204ENST00000558376 HAS3O00219 553 aa12.93□□□□□ -0.34
RABGGTA-204ENST00000558376 LARGE1O95461 756 aa12.93□□□□□ -0.34
RABGGTA-204ENST00000558376 STXBP2Q15833 593 aa12.93□□□□□ -0.34
RABGGTA-204ENST00000558376 DGKDQ16760 1214 aa12.93□□□□□ -0.34
RABGGTA-204ENST00000558376 ZNF618Q5T7W0 954 aa12.93□□□□□ -0.34
RABGGTA-204ENST00000558376 FAM117BQ6P1L5 589 aa12.93□□□□□ -0.34
RABGGTA-204ENST00000558376 TGS1Q96RS0 853 aaKnown RBP12.93□□□□□ -0.34
RABGGTA-204ENST00000558376 IWS1Q96ST2 819 aa12.93□□□□□ -0.34
RABGGTA-204ENST00000558376 ARIH1Q9Y4X5 557 aaPredicted RBP12.93□□□□□ -0.34
RABGGTA-204ENST00000558376 MICAL3Q7RTP6 2002 aa12.93□□□□□ -0.34
RABGGTA-204ENST00000558376 GPR37L1O60883 481 aa12.92□□□□□ -0.34
RABGGTA-204ENST00000558376 EIF2AK2P19525 551 aaKnown RBP12.92□□□□□ -0.34
RABGGTA-204ENST00000558376 MFSD10Q14728 455 aa12.92□□□□□ -0.34
RABGGTA-204ENST00000558376 QRICH1Q2TAL8 776 aa12.92□□□□□ -0.34
RABGGTA-204ENST00000558376 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.92□□□□□ -0.34
RABGGTA-204ENST00000558376 DGKHQ86XP1 1220 aa12.92□□□□□ -0.34
RABGGTA-204ENST00000558376 C7orf31Q8N865 590 aa12.92□□□□□ -0.34
RABGGTA-204ENST00000558376 MAF1Q9H063 256 aa12.92□□□□□ -0.34
RABGGTA-204ENST00000558376 UBE2ZQ9H832 354 aaPredicted RBP12.92□□□□□ -0.34
RABGGTA-204ENST00000558376 BAZ2BQ9UIF8 2168 aaKnown RBP12.92□□□□□ -0.34
RABGGTA-204ENST00000558376 PI4K2BG5E9Z4 385 aa12.91□□□□□ -0.34
RABGGTA-204ENST00000558376 PARNO95453 639 aaKnown RBP12.91□□□□□ -0.34
RABGGTA-204ENST00000558376 ZNF286BP0CG31 522 aa12.91□□□□□ -0.34
RABGGTA-204ENST00000558376 PCP11498 1178 aaKnown RBP12.91□□□□□ -0.34
RABGGTA-204ENST00000558376 PTK7Q13308 1070 aa12.91□□□□□ -0.34
RABGGTA-204ENST00000558376 TOB2Q14106 344 aaPredicted RBP12.91□□□□□ -0.34
RABGGTA-204ENST00000558376 KRT32Q14532 448 aa12.91□□□□□ -0.34
RABGGTA-204ENST00000558376 KIAA0753Q2KHM9 967 aa12.91□□□□□ -0.34
RABGGTA-204ENST00000558376 ARHGEF16Q5VV41 709 aa12.91□□□□□ -0.34
RABGGTA-204ENST00000558376 PNMA1Q8ND90 353 aa12.91□□□□□ -0.34
RABGGTA-204ENST00000558376 ANKS1AQ92625 1134 aa12.91□□□□□ -0.34
RABGGTA-204ENST00000558376 ESR2Q92731 530 aa12.91□□□□□ -0.34
RABGGTA-204ENST00000558376 EMID1Q96A84 441 aaPredicted RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms