RNA–Protein interactions for RNA: ENST00000558282.5

CSPG4P12-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

BASIC

Gene CSPG4P12, Length 4,853 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-201ENST00000558282 RASSF3Q86WH2 238 aa12.71□□□□□ -0.37
CSPG4P12-201ENST00000558282 SRRM1Q8IYB3 904 aaKnown RBP12.71□□□□□ -0.37
CSPG4P12-201ENST00000558282 RNF169Q8NCN4 708 aa12.71□□□□□ -0.37
CSPG4P12-201ENST00000558282 KRT82Q9NSB4 513 aa12.71□□□□□ -0.37
CSPG4P12-201ENST00000558282 NOC2LQ9Y3T9 749 aaKnown RBP12.71□□□□□ -0.37
CSPG4P12-201ENST00000558282 A0A0G2JND7 137 aa12.71□□□□□ -0.38
CSPG4P12-201ENST00000558282 ATF7P17544 494 aaPredicted RBP12.71□□□□□ -0.38
CSPG4P12-201ENST00000558282 CTCFP49711 727 aaPredicted RBP12.71□□□□□ -0.38
CSPG4P12-201ENST00000558282 PAPOLAP51003 745 aaKnown RBP12.71□□□□□ -0.38
CSPG4P12-201ENST00000558282 SCRN1Q12765 414 aa12.71□□□□□ -0.38
CSPG4P12-201ENST00000558282 BYSLQ13895 437 aaKnown RBP12.71□□□□□ -0.38
CSPG4P12-201ENST00000558282 CCDC144BQ3MJ40 725 aa12.71□□□□□ -0.38
CSPG4P12-201ENST00000558282 RPGRQ92834 1020 aaKnown RBP12.71□□□□□ -0.38
CSPG4P12-201ENST00000558282 HAUS7Q99871 368 aa12.71□□□□□ -0.38
CSPG4P12-201ENST00000558282 SH3GL2Q99962 352 aa12.71□□□□□ -0.38
CSPG4P12-201ENST00000558282 IL1RAPL1Q9NZN1 696 aa12.71□□□□□ -0.38
CSPG4P12-201ENST00000558282 SEPT10Q9P0V9 454 aa12.71□□□□□ -0.38
CSPG4P12-201ENST00000558282 SEPT3Q9UH03 358 aa12.71□□□□□ -0.38
CSPG4P12-201ENST00000558282 ADGRG1Q9Y653 693 aa12.71□□□□□ -0.38
CSPG4P12-201ENST00000558282 NOS1P29475 1434 aa12.71□□□□□ -0.38
CSPG4P12-201ENST00000558282 CHL1O00533 1208 aa12.71□□□□□ -0.38
CSPG4P12-201ENST00000558282 VSNL1P62760 191 aa12.71□□□□□ -0.38
CSPG4P12-201ENST00000558282 RESTQ13127 1097 aa12.71□□□□□ -0.38
CSPG4P12-201ENST00000558282 ADAM9Q13443 819 aa12.71□□□□□ -0.38
CSPG4P12-201ENST00000558282 RGS9BPQ6ZS82 235 aa12.71□□□□□ -0.38
CSPG4P12-201ENST00000558282 APOBEC2Q9Y235 224 aaKnown RBP12.71□□□□□ -0.38
CSPG4P12-201ENST00000558282 ADCY9O60503 1353 aa12.71□□□□□ -0.38
CSPG4P12-201ENST00000558282 MAGEA13PA6NCF6 341 aa12.7□□□□□ -0.38
CSPG4P12-201ENST00000558282 CCDC22O60826 627 aa12.7□□□□□ -0.38
CSPG4P12-201ENST00000558282 EIF4A2Q14240 407 aaKnown RBP12.7□□□□□ -0.38
CSPG4P12-201ENST00000558282 FAM26FQ5R3K3 315 aa12.7□□□□□ -0.38
CSPG4P12-201ENST00000558282 FAM161BQ96MY7 647 aa12.7□□□□□ -0.38
CSPG4P12-201ENST00000558282 TTC25Q96NG3 672 aa12.7□□□□□ -0.38
CSPG4P12-201ENST00000558282 SAMSN1Q9NSI8 373 aaKnown RBP12.7□□□□□ -0.38
CSPG4P12-201ENST00000558282 USP27XA6NNY8 438 aa12.7□□□□□ -0.38
CSPG4P12-201ENST00000558282 FAM107AO95990 144 aa12.7□□□□□ -0.38
CSPG4P12-201ENST00000558282 AOC3Q16853 763 aa12.7□□□□□ -0.38
CSPG4P12-201ENST00000558282 SPATA21Q7Z572 469 aa12.7□□□□□ -0.38
CSPG4P12-201ENST00000558282 CSRNP1Q96S65 589 aa12.7□□□□□ -0.38
CSPG4P12-201ENST00000558282 ING2Q9H160 280 aa12.7□□□□□ -0.38
CSPG4P12-201ENST00000558282 CACYBPQ9HB71 228 aaKnown RBP12.7□□□□□ -0.38
CSPG4P12-201ENST00000558282 VPS54Q9P1Q0 977 aa12.7□□□□□ -0.38
CSPG4P12-201ENST00000558282 TBK1Q9UHD2 729 aa12.7□□□□□ -0.38
CSPG4P12-201ENST00000558282 ZNF229Q9UJW7 825 aa12.7□□□□□ -0.38
CSPG4P12-201ENST00000558282 MAP3K5Q99683 1374 aa12.7□□□□□ -0.38
CSPG4P12-201ENST00000558282 KDM5DQ9BY66 1539 aa12.7□□□□□ -0.38
CSPG4P12-201ENST00000558282 S100BP04271 92 aaPredicted RBP12.7□□□□□ -0.38
CSPG4P12-201ENST00000558282 POLR2BP30876 1174 aaKnown RBP12.7□□□□□ -0.38
CSPG4P12-201ENST00000558282 CUL4BQ13620 913 aa12.7□□□□□ -0.38
CSPG4P12-201ENST00000558282 PPP2R5DQ14738 602 aa12.7□□□□□ -0.38
CSPG4P12-201ENST00000558282 PDZD4Q76G19 769 aaPredicted RBP12.7□□□□□ -0.38
CSPG4P12-201ENST00000558282 EPM2AIP1Q7L775 607 aaPredicted RBP12.7□□□□□ -0.38
CSPG4P12-201ENST00000558282 MIGA1Q8NAN2 632 aa12.7□□□□□ -0.38
CSPG4P12-201ENST00000558282 NSUN7Q8NE18 718 aaKnown RBP12.7□□□□□ -0.38
CSPG4P12-201ENST00000558282 TGS1Q96RS0 853 aaKnown RBP12.7□□□□□ -0.38
CSPG4P12-201ENST00000558282 TTC1Q99614 292 aa12.7□□□□□ -0.38
CSPG4P12-201ENST00000558282 IQCA1LA6NCM1 817 aa12.7□□□□□ -0.38
CSPG4P12-201ENST00000558282 EXOC5O00471 708 aa12.7□□□□□ -0.38
CSPG4P12-201ENST00000558282 ARFIP2P53365 341 aa12.7□□□□□ -0.38
CSPG4P12-201ENST00000558282 HDLBPQ00341 1268 aaKnown RBP12.7□□□□□ -0.38
CSPG4P12-201ENST00000558282 GUCY1A3Q02108 690 aa12.7□□□□□ -0.38
CSPG4P12-201ENST00000558282 MESDQ14696 234 aa12.7□□□□□ -0.38
CSPG4P12-201ENST00000558282 MTHFSDQ2M296 383 aaKnown RBP12.7□□□□□ -0.38
CSPG4P12-201ENST00000558282 RCSD1Q6JBY9 416 aa12.7□□□□□ -0.38
CSPG4P12-201ENST00000558282 GIPC2Q8TF65 315 aa12.7□□□□□ -0.38
CSPG4P12-201ENST00000558282 NOD2Q9HC29 1040 aa12.7□□□□□ -0.38
CSPG4P12-201ENST00000558282 PAPOLBQ9NRJ5 636 aaKnown RBP12.7□□□□□ -0.38
CSPG4P12-201ENST00000558282 ETAA1Q9NY74 926 aa12.7□□□□□ -0.38
CSPG4P12-201ENST00000558282 TBC1D7Q9P0N9 293 aa12.7□□□□□ -0.38
CSPG4P12-201ENST00000558282 TRPC6Q9Y210 931 aa12.7□□□□□ -0.38
CSPG4P12-201ENST00000558282 ATP11BQ9Y2G3 1177 aa12.7□□□□□ -0.38
CSPG4P12-201ENST00000558282 TRAPPC8Q9Y2L5 1435 aa12.69□□□□□ -0.38
CSPG4P12-201ENST00000558282 CARMIL3Q8ND23 1372 aa12.69□□□□□ -0.38
CSPG4P12-201ENST00000558282 A0A1B0GW55 424 aa12.69□□□□□ -0.38
CSPG4P12-201ENST00000558282 MIF4GDA9UHW6 222 aaKnown RBP12.69□□□□□ -0.38
CSPG4P12-201ENST00000558282 DUX4L2P0CJ85 424 aa12.69□□□□□ -0.38
CSPG4P12-201ENST00000558282 DUX4L3P0CJ86 424 aa12.69□□□□□ -0.38
CSPG4P12-201ENST00000558282 DUX4L4P0CJ87 422 aa12.69□□□□□ -0.38
CSPG4P12-201ENST00000558282 DUX4L5P0CJ88 424 aa12.69□□□□□ -0.38
CSPG4P12-201ENST00000558282 DUX4L6P0CJ89 424 aa12.69□□□□□ -0.38
CSPG4P12-201ENST00000558282 DUX4L7P0CJ90 424 aa12.69□□□□□ -0.38
CSPG4P12-201ENST00000558282 ATP1A3P13637 1013 aa12.69□□□□□ -0.38
CSPG4P12-201ENST00000558282 PMS2P54278 862 aa12.69□□□□□ -0.38
CSPG4P12-201ENST00000558282 ADCY1Q08828 1119 aa12.69□□□□□ -0.38
CSPG4P12-201ENST00000558282 RINT1Q6NUQ1 792 aa12.69□□□□□ -0.38
CSPG4P12-201ENST00000558282 CYB5D1Q6P9G0 228 aa12.69□□□□□ -0.38
CSPG4P12-201ENST00000558282 AK8Q96MA6 479 aa12.69□□□□□ -0.38
CSPG4P12-201ENST00000558282 SLITRK6Q9H5Y7 841 aa12.69□□□□□ -0.38
CSPG4P12-201ENST00000558282 ATP6V0A4Q9HBG4 840 aa12.69□□□□□ -0.38
CSPG4P12-201ENST00000558282 GID8Q9NWU2 228 aa12.69□□□□□ -0.38
CSPG4P12-201ENST00000558282 DUX4Q9UBX2 424 aa12.69□□□□□ -0.38
CSPG4P12-201ENST00000558282 NCF2P19878 526 aaPredicted RBP12.69□□□□□ -0.38
CSPG4P12-201ENST00000558282 OLFML2BQ68BL8 750 aa12.69□□□□□ -0.38
CSPG4P12-201ENST00000558282 PDXDC1Q6P996 788 aa12.69□□□□□ -0.38
CSPG4P12-201ENST00000558282 BLIDQ8IZY5 108 aa12.69□□□□□ -0.38
CSPG4P12-201ENST00000558282 REXO1Q8N1G1 1221 aaKnown RBP12.69□□□□□ -0.38
CSPG4P12-201ENST00000558282 NSMCE1Q8WV22 266 aa12.69□□□□□ -0.38
CSPG4P12-201ENST00000558282 PHACTR3Q96KR7 559 aa12.69□□□□□ -0.38
CSPG4P12-201ENST00000558282 FAM81BQ96LP2 452 aa12.69□□□□□ -0.38
CSPG4P12-201ENST00000558282 ABHD10Q9NUJ1 306 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms