RNA–Protein interactions for RNA: ENST00000558138.1

SPG11-207, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 750 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-207ENST00000558138 KIAA1217Q5T5P2 1943 aa10.25□□□□□ -0.77
SPG11-207ENST00000558138 ESYT2A0FGR8 921 aa10.25□□□□□ -0.77
SPG11-207ENST00000558138 DCDC2CA8MYV0 355 aa10.25□□□□□ -0.77
SPG11-207ENST00000558138 DTNBO60941 627 aa10.25□□□□□ -0.77
SPG11-207ENST00000558138 LARGE1O95461 756 aa10.25□□□□□ -0.77
SPG11-207ENST00000558138 MMP3P08254 477 aa10.25□□□□□ -0.77
SPG11-207ENST00000558138 UBA1P22314 1058 aaKnown RBP10.25□□□□□ -0.77
SPG11-207ENST00000558138 PSMC6P62333 389 aa10.25□□□□□ -0.77
SPG11-207ENST00000558138 NEDD9Q14511 834 aa10.25□□□□□ -0.77
SPG11-207ENST00000558138 DGKDQ16760 1214 aa10.25□□□□□ -0.77
SPG11-207ENST00000558138 FAM184AQ8NB25 1140 aa10.25□□□□□ -0.77
SPG11-207ENST00000558138 RASGRP4Q8TDF6 673 aa10.25□□□□□ -0.77
SPG11-207ENST00000558138 MTG1Q9BT17 334 aaPredicted RBP10.25□□□□□ -0.77
SPG11-207ENST00000558138 ALG1Q9BT22 464 aa10.25□□□□□ -0.77
SPG11-207ENST00000558138 ZMYND12Q9H0C1 365 aa10.25□□□□□ -0.77
SPG11-207ENST00000558138 SH3GLB2Q9NR46 395 aa10.25□□□□□ -0.77
SPG11-207ENST00000558138 DDX41Q9UJV9 622 aaKnown RBP10.25□□□□□ -0.77
SPG11-207ENST00000558138 NOD1Q9Y239 953 aa10.25□□□□□ -0.77
SPG11-207ENST00000558138 FRMPD4Q14CM0 1322 aa10.25□□□□□ -0.77
SPG11-207ENST00000558138 KPNA6O60684 536 aa10.24□□□□□ -0.77
SPG11-207ENST00000558138 TGFB3P10600 412 aa10.24□□□□□ -0.77
SPG11-207ENST00000558138 MRPS9P82933 396 aaKnown RBP10.24□□□□□ -0.77
SPG11-207ENST00000558138 ARHGAP4P98171 946 aa10.24□□□□□ -0.77
SPG11-207ENST00000558138 ARHGAP1Q07960 439 aa10.24□□□□□ -0.77
SPG11-207ENST00000558138 ITGA7Q13683 1181 aa10.24□□□□□ -0.77
SPG11-207ENST00000558138 GNL2Q13823 731 aaKnown RBP10.24□□□□□ -0.77
SPG11-207ENST00000558138 CELF3Q5SZQ8 465 aaKnown RBP10.24□□□□□ -0.77
SPG11-207ENST00000558138 CCDC62Q6P9F0 684 aa10.24□□□□□ -0.77
SPG11-207ENST00000558138 CYFIP1Q7L576 1253 aa10.24□□□□□ -0.77
SPG11-207ENST00000558138 TEX2Q8IWB9 1127 aa10.24□□□□□ -0.77
SPG11-207ENST00000558138 BLIDQ8IZY5 108 aa10.24□□□□□ -0.77
SPG11-207ENST00000558138 GIMAP8Q8ND71 665 aaPredicted RBP10.24□□□□□ -0.77
SPG11-207ENST00000558138 GPRASP2Q96D09 838 aa10.24□□□□□ -0.77
SPG11-207ENST00000558138 IL17RAQ96F46 866 aa10.24□□□□□ -0.77
SPG11-207ENST00000558138 AIFM3Q96NN9 605 aa10.24□□□□□ -0.77
SPG11-207ENST00000558138 SDF4Q9BRK5 362 aa10.24□□□□□ -0.77
SPG11-207ENST00000558138 KATNAL1Q9BW62 490 aa10.24□□□□□ -0.77
SPG11-207ENST00000558138 SH2B1Q9NRF2 756 aaPredicted RBP10.24□□□□□ -0.77
SPG11-207ENST00000558138 TMEM39AQ9NV64 488 aa10.24□□□□□ -0.77
SPG11-207ENST00000558138 PCDHA4Q9UN74 947 aa10.24□□□□□ -0.77
SPG11-207ENST00000558138 KCNJ14Q9UNX9 436 aa10.24□□□□□ -0.77
SPG11-207ENST00000558138 ELP1O95163 1332 aa10.24□□□□□ -0.77
SPG11-207ENST00000558138 STK36Q9NRP7 1315 aa10.24□□□□□ -0.77
SPG11-207ENST00000558138 CCDC194A0A1B0GVG4 234 aa10.23□□□□□ -0.77
SPG11-207ENST00000558138 ARVCFO00192 962 aa10.23□□□□□ -0.77
SPG11-207ENST00000558138 RGS20O76081 388 aa10.23□□□□□ -0.77
SPG11-207ENST00000558138 CLTBP09497 229 aa10.23□□□□□ -0.77
SPG11-207ENST00000558138 ZNF286BP0CG31 522 aa10.23□□□□□ -0.77
SPG11-207ENST00000558138 SREBF1P36956 1147 aa10.23□□□□□ -0.77
SPG11-207ENST00000558138 PURAQ00577 322 aaKnown RBP10.23□□□□□ -0.77
SPG11-207ENST00000558138 TLE2Q04725 743 aa10.23□□□□□ -0.77
SPG11-207ENST00000558138 UTP14CQ5TAP6 766 aaKnown RBP10.23□□□□□ -0.77
SPG11-207ENST00000558138 CCSAPQ6IQ19 270 aaPredicted RBP10.23□□□□□ -0.77
SPG11-207ENST00000558138 GALNT17Q6IS24 598 aa10.23□□□□□ -0.77
SPG11-207ENST00000558138 CHRDL2Q6WN34 429 aa10.23□□□□□ -0.77
SPG11-207ENST00000558138 PPTC7Q8NI37 304 aa10.23□□□□□ -0.77
SPG11-207ENST00000558138 TBC1D32Q96NH3 1257 aa10.23□□□□□ -0.77
SPG11-207ENST00000558138 INPP4AQ96PE3 977 aaPredicted RBP10.23□□□□□ -0.77
SPG11-207ENST00000558138 MXRA8Q9BRK3 442 aa10.23□□□□□ -0.77
SPG11-207ENST00000558138 JADE2Q9NQC1 790 aa10.23□□□□□ -0.77
SPG11-207ENST00000558138 MYH7BA7E2Y1 1941 aa10.23□□□□□ -0.77
SPG11-207ENST00000558138 ALPK3Q96L96 1907 aa10.23□□□□□ -0.77
SPG11-207ENST00000558138 PDE4DIPQ5VU43 2346 aa10.22□□□□□ -0.77
SPG11-207ENST00000558138 A6NJR5 290 aa10.22□□□□□ -0.77
SPG11-207ENST00000558138 SPATA31C2B4DYI2 1134 aa10.22□□□□□ -0.77
SPG11-207ENST00000558138 DDX39AO00148 427 aaKnown RBP10.22□□□□□ -0.77
SPG11-207ENST00000558138 CTAGE5O15320 804 aa10.22□□□□□ -0.77
SPG11-207ENST00000558138 JAK2O60674 1132 aa10.22□□□□□ -0.77
SPG11-207ENST00000558138 RAG1P15918 1043 aa10.22□□□□□ -0.77
SPG11-207ENST00000558138 ITGB5P18084 799 aa10.22□□□□□ -0.77
SPG11-207ENST00000558138 ICAM3P32942 547 aa10.22□□□□□ -0.77
SPG11-207ENST00000558138 KRT2P35908 639 aa10.22□□□□□ -0.77
SPG11-207ENST00000558138 MCM2P49736 904 aa10.22□□□□□ -0.77
SPG11-207ENST00000558138 CLK2P49760 499 aaKnown RBP10.22□□□□□ -0.77
SPG11-207ENST00000558138 NKX3-2P78367 333 aa10.22□□□□□ -0.77
SPG11-207ENST00000558138 MDM2Q00987 491 aaPredicted RBP10.22□□□□□ -0.77
SPG11-207ENST00000558138 SETQ01105 290 aaPredicted RBP10.22□□□□□ -0.77
SPG11-207ENST00000558138 SP2Q02086 613 aa10.22□□□□□ -0.77
SPG11-207ENST00000558138 SAFBQ15424 915 aaKnown RBP eCLIP10.22□□□□□ -0.77
SPG11-207ENST00000558138 CEP55Q53EZ4 464 aa10.22□□□□□ -0.77
SPG11-207ENST00000558138 PRR16Q569H4 304 aa10.22□□□□□ -0.77
SPG11-207ENST00000558138 MYSM1Q5VVJ2 828 aa10.22□□□□□ -0.77
SPG11-207ENST00000558138 METTL7BQ6UX53 244 aa10.22□□□□□ -0.77
SPG11-207ENST00000558138 PLA2G4DQ86XP0 818 aa10.22□□□□□ -0.77
SPG11-207ENST00000558138 C7orf31Q8N865 590 aa10.22□□□□□ -0.77
SPG11-207ENST00000558138 NSUN7Q8NE18 718 aaKnown RBP10.22□□□□□ -0.77
SPG11-207ENST00000558138 PPP1R13LQ8WUF5 828 aa10.22□□□□□ -0.77
SPG11-207ENST00000558138 EMID1Q96A84 441 aaPredicted RBP10.22□□□□□ -0.77
SPG11-207ENST00000558138 BACH2Q9BYV9 841 aa10.22□□□□□ -0.77
SPG11-207ENST00000558138 ZNF215Q9UL58 517 aaPredicted RBP10.22□□□□□ -0.77
SPG11-207ENST00000558138 UBIAD1Q9Y5Z9 338 aa10.22□□□□□ -0.77
SPG11-207ENST00000558138 MAFGO15525 162 aa10.21□□□□□ -0.77
SPG11-207ENST00000558138 MARCH6O60337 910 aa10.21□□□□□ -0.77
SPG11-207ENST00000558138 CTDNEP1O95476 244 aa10.21□□□□□ -0.77
SPG11-207ENST00000558138 PSEN2P49810 448 aa10.21□□□□□ -0.77
SPG11-207ENST00000558138 HMGN5P82970 282 aaKnown RBP10.21□□□□□ -0.77
SPG11-207ENST00000558138 SEMA3FQ13275 785 aa10.21□□□□□ -0.77
SPG11-207ENST00000558138 MFSD10Q14728 455 aa10.21□□□□□ -0.77
SPG11-207ENST00000558138 SNX17Q15036 470 aa10.21□□□□□ -0.77
SPG11-207ENST00000558138 NONOQ15233 471 aaKnown RBP eCLIP10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms