RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 KRT2P35908 639 aa16.35■□□□□ 0.21
USP3-205ENST00000557884 ARHGAP1Q07960 439 aa16.35■□□□□ 0.21
USP3-205ENST00000557884 KCNA10Q16322 511 aa16.35■□□□□ 0.21
USP3-205ENST00000557884 MXRA8Q9BRK3 442 aa16.35■□□□□ 0.21
USP3-205ENST00000557884 SENP6Q9GZR1 1112 aaPredicted RBP16.35■□□□□ 0.21
USP3-205ENST00000557884 BCAS3Q9H6U6 928 aa16.35■□□□□ 0.21
USP3-205ENST00000557884 BRMS1Q9HCU9 246 aa16.35■□□□□ 0.21
USP3-205ENST00000557884 Q9Y3F1 56 aa16.35■□□□□ 0.21
USP3-205ENST00000557884 DNAH12Q6ZR08 3092 aa16.34■□□□□ 0.21
USP3-205ENST00000557884 CCDC194A0A1B0GVG4 234 aa16.34■□□□□ 0.21
USP3-205ENST00000557884 GGPS1O95749 300 aa16.34■□□□□ 0.21
USP3-205ENST00000557884 MMP1P03956 469 aa16.34■□□□□ 0.21
USP3-205ENST00000557884 COL6A1P12109 1028 aa16.34■□□□□ 0.21
USP3-205ENST00000557884 GJB2P29033 226 aa16.34■□□□□ 0.21
USP3-205ENST00000557884 ICAM3P32942 547 aa16.34■□□□□ 0.21
USP3-205ENST00000557884 RGS19P49795 217 aa16.34■□□□□ 0.21
USP3-205ENST00000557884 NR5A1Q13285 461 aa16.34■□□□□ 0.21
USP3-205ENST00000557884 MTMR1Q13613 665 aa16.34■□□□□ 0.21
USP3-205ENST00000557884 CEP55Q53EZ4 464 aa16.34■□□□□ 0.21
USP3-205ENST00000557884 KCNV1Q6PIU1 500 aa16.34■□□□□ 0.21
USP3-205ENST00000557884 DHX37Q8IY37 1157 aaKnown RBP16.34■□□□□ 0.21
USP3-205ENST00000557884 DIS3L2Q8IYB7 885 aaKnown RBP16.34■□□□□ 0.21
USP3-205ENST00000557884 TBCKQ8TEA7 893 aa16.34■□□□□ 0.21
USP3-205ENST00000557884 AFG1LQ8WV93 481 aa16.34■□□□□ 0.21
USP3-205ENST00000557884 CRYGNQ8WXF5 182 aa16.34■□□□□ 0.21
USP3-205ENST00000557884 GPRASP2Q96D09 838 aa16.34■□□□□ 0.21
USP3-205ENST00000557884 UIMC1Q96RL1 719 aa16.34■□□□□ 0.21
USP3-205ENST00000557884 JADE2Q9NQC1 790 aa16.34■□□□□ 0.21
USP3-205ENST00000557884 SMC3Q9UQE7 1217 aa16.34■□□□□ 0.21
USP3-205ENST00000557884 FAM86B1E9PN63 330 aa16.33■□□□□ 0.2
USP3-205ENST00000557884 K7ELQ4 463 aaPredicted RBP16.33■□□□□ 0.2
USP3-205ENST00000557884 CYP3A4P08684 503 aa16.33■□□□□ 0.2
USP3-205ENST00000557884 FAM86B2P0C5J1 330 aa16.33■□□□□ 0.2
USP3-205ENST00000557884 ARP10275 920 aa16.33■□□□□ 0.2
USP3-205ENST00000557884 TGFB3P10600 412 aa16.33■□□□□ 0.2
USP3-205ENST00000557884 CST5P28325 142 aaPredicted RBP16.33■□□□□ 0.2
USP3-205ENST00000557884 ACLYP53396 1101 aa16.33■□□□□ 0.2
USP3-205ENST00000557884 ATN1P54259 1190 aaPredicted RBP16.33■□□□□ 0.2
USP3-205ENST00000557884 CUL4AQ13619 759 aa16.33■□□□□ 0.2
USP3-205ENST00000557884 NONOQ15233 471 aaKnown RBP eCLIP16.33■□□□□ 0.2
USP3-205ENST00000557884 INF2Q27J81 1249 aa16.33■□□□□ 0.2
USP3-205ENST00000557884 EARS2Q5JPH6 523 aaKnown RBP16.33■□□□□ 0.2
USP3-205ENST00000557884 CELF3Q5SZQ8 465 aaKnown RBP16.33■□□□□ 0.2
USP3-205ENST00000557884 CCSAPQ6IQ19 270 aaPredicted RBP16.33■□□□□ 0.2
USP3-205ENST00000557884 PIK3AP1Q6ZUJ8 805 aa16.33■□□□□ 0.2
USP3-205ENST00000557884 KRT25Q7Z3Z0 450 aa16.33■□□□□ 0.2
USP3-205ENST00000557884 FOXD4L1Q9NU39 408 aa16.33■□□□□ 0.2
USP3-205ENST00000557884 PHF24Q9UPV7 400 aa16.33■□□□□ 0.2
USP3-205ENST00000557884 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.33■□□□□ 0.2
USP3-205ENST00000557884 A0A1W2PQ45 241 aaPredicted RBP16.32■□□□□ 0.2
USP3-205ENST00000557884 A0A1W2PQY0 241 aa16.32■□□□□ 0.2
USP3-205ENST00000557884 FAM205CA6NFA0 338 aa16.32■□□□□ 0.2
USP3-205ENST00000557884 BTBD18B2RXH4 712 aa16.32■□□□□ 0.2
USP3-205ENST00000557884 EDIL3O43854 480 aa16.32■□□□□ 0.2
USP3-205ENST00000557884 ATP9AO75110 1047 aa16.32■□□□□ 0.2
USP3-205ENST00000557884 ASGR1P07306 291 aa16.32■□□□□ 0.2
USP3-205ENST00000557884 MYL3P08590 195 aa16.32■□□□□ 0.2
USP3-205ENST00000557884 CPT1AP50416 773 aa16.32■□□□□ 0.2
USP3-205ENST00000557884 NKX3-2P78367 333 aa16.32■□□□□ 0.2
USP3-205ENST00000557884 SP4Q02446 784 aa16.32■□□□□ 0.2
USP3-205ENST00000557884 LAMC2Q13753 1193 aa16.32■□□□□ 0.2
USP3-205ENST00000557884 SAFBQ15424 915 aaKnown RBP eCLIP16.32■□□□□ 0.2
USP3-205ENST00000557884 MYSM1Q5VVJ2 828 aa16.32■□□□□ 0.2
USP3-205ENST00000557884 CXCL17Q6UXB2 119 aa16.32■□□□□ 0.2
USP3-205ENST00000557884 CYFIP1Q7L576 1253 aa16.32■□□□□ 0.2
USP3-205ENST00000557884 PLA2G4DQ86XP0 818 aa16.32■□□□□ 0.2
USP3-205ENST00000557884 HSCBQ8IWL3 235 aa16.32■□□□□ 0.2
USP3-205ENST00000557884 PCSK9Q8NBP7 692 aaKnown RBP16.32■□□□□ 0.2
USP3-205ENST00000557884 FBXO18Q8NFZ0 1043 aa16.32■□□□□ 0.2
USP3-205ENST00000557884 SNX21Q969T3 373 aa16.32■□□□□ 0.2
USP3-205ENST00000557884 VTI1AQ96AJ9 217 aa16.32■□□□□ 0.2
USP3-205ENST00000557884 CDHR1Q96JP9 859 aa16.32■□□□□ 0.2
USP3-205ENST00000557884 TSEN34Q9BSV6 310 aaKnown RBP16.32■□□□□ 0.2
USP3-205ENST00000557884 MLXIPQ9HAP2 919 aa16.32■□□□□ 0.2
USP3-205ENST00000557884 KCNH7Q9NS40 1196 aa16.32■□□□□ 0.2
USP3-205ENST00000557884 KIF3AQ9Y496 699 aa16.32■□□□□ 0.2
USP3-205ENST00000557884 MOXD2PA6NHM9 499 aa16.31■□□□□ 0.2
USP3-205ENST00000557884 MEIS1O00470 390 aa16.31■□□□□ 0.2
USP3-205ENST00000557884 ZEB2O60315 1214 aa16.31■□□□□ 0.2
USP3-205ENST00000557884 KCNA2P16389 499 aa16.31■□□□□ 0.2
USP3-205ENST00000557884 NEDD9Q14511 834 aa16.31■□□□□ 0.2
USP3-205ENST00000557884 PRR16Q569H4 304 aa16.31■□□□□ 0.2
USP3-205ENST00000557884 BRDTQ58F21 947 aaPredicted RBP16.31■□□□□ 0.2
USP3-205ENST00000557884 TNFRSF25Q93038 417 aa16.31■□□□□ 0.2
USP3-205ENST00000557884 EMID1Q96A84 441 aaPredicted RBP16.31■□□□□ 0.2
USP3-205ENST00000557884 SPATA33Q96N06 139 aa16.31■□□□□ 0.2
USP3-205ENST00000557884 AGO4Q9HCK5 861 aaKnown RBP16.31■□□□□ 0.2
USP3-205ENST00000557884 TELO2Q9Y4R8 837 aa16.31■□□□□ 0.2
USP3-205ENST00000557884 IGLV3-22A0A075B6J6 115 aa16.3■□□□□ 0.2
USP3-205ENST00000557884 A6NJR5 290 aa16.3■□□□□ 0.2
USP3-205ENST00000557884 TDP2O95551 362 aa16.3■□□□□ 0.2
USP3-205ENST00000557884 MMP3P08254 477 aa16.3■□□□□ 0.2
USP3-205ENST00000557884 CIITAP33076 1130 aa16.3■□□□□ 0.2
USP3-205ENST00000557884 USP11P51784 963 aa16.3■□□□□ 0.2
USP3-205ENST00000557884 MLLT1Q03111 559 aaPredicted RBP16.3■□□□□ 0.2
USP3-205ENST00000557884 LRRC26Q2I0M4 334 aa16.3■□□□□ 0.2
USP3-205ENST00000557884 LETM2Q2VYF4 491 aa16.3■□□□□ 0.2
USP3-205ENST00000557884 METTL7BQ6UX53 244 aa16.3■□□□□ 0.2
USP3-205ENST00000557884 SENP7Q9BQF6 1050 aa16.3■□□□□ 0.2
USP3-205ENST00000557884 STARD7Q9NQZ5 370 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms