RNA–Protein interactions for RNA: ENST00000557588.5

ABCD4-228, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3 BASIC

Gene ABCD4, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-228ENST00000557588 HAND2P61296 217 aa21.44■■□□□ 1.02
ABCD4-228ENST00000557588 ZNF200P98182 395 aaPredicted RBP21.44■■□□□ 1.02
ABCD4-228ENST00000557588 HIC1Q14526 733 aa21.44■■□□□ 1.02
ABCD4-228ENST00000557588 CSPP1Q1MSJ5 1256 aa21.44■■□□□ 1.02
ABCD4-228ENST00000557588 MCMDC2Q4G0Z9 681 aa21.44■■□□□ 1.02
ABCD4-228ENST00000557588 EPC2Q52LR7 807 aa21.44■■□□□ 1.02
ABCD4-228ENST00000557588 PLEKHG4Q58EX7 1191 aa21.44■■□□□ 1.02
ABCD4-228ENST00000557588 MFSD6Q6ZSS7 791 aa21.44■■□□□ 1.02
ABCD4-228ENST00000557588 TICAM2Q86XR7 235 aa21.44■■□□□ 1.02
ABCD4-228ENST00000557588 DBF4BQ8NFT6 615 aa21.44■■□□□ 1.02
ABCD4-228ENST00000557588 PABPC5Q96DU9 382 aaKnown RBP21.44■■□□□ 1.02
ABCD4-228ENST00000557588 UBA5Q9GZZ9 404 aa21.44■■□□□ 1.02
ABCD4-228ENST00000557588 KCNH6Q9H252 994 aa21.44■■□□□ 1.02
ABCD4-228ENST00000557588 PXMP2Q9NR77 195 aa21.44■■□□□ 1.02
ABCD4-228ENST00000557588 MYH7BA7E2Y1 1941 aa21.44■■□□□ 1.02
ABCD4-228ENST00000557588 ZNF318Q5VUA4 2279 aa21.44■■□□□ 1.02
ABCD4-228ENST00000557588 ATG2AQ2TAZ0 1938 aa21.43■■□□□ 1.02
ABCD4-228ENST00000557588 POTEB3A0JP26 581 aa21.43■■□□□ 1.02
ABCD4-228ENST00000557588 H3BNC9 293 aa21.43■■□□□ 1.02
ABCD4-228ENST00000557588 H3BQ06 376 aaPredicted RBP21.43■■□□□ 1.02
ABCD4-228ENST00000557588 EIF2AK2P19525 551 aaKnown RBP21.43■■□□□ 1.02
ABCD4-228ENST00000557588 MRE11P49959 708 aa21.43■■□□□ 1.02
ABCD4-228ENST00000557588 ZP2Q05996 745 aa21.43■■□□□ 1.02
ABCD4-228ENST00000557588 ARHGEF16Q5VV41 709 aa21.43■■□□□ 1.02
ABCD4-228ENST00000557588 POTEBQ6S5H4 581 aa21.43■■□□□ 1.02
ABCD4-228ENST00000557588 ZNF589Q86UQ0 364 aaPredicted RBP21.43■■□□□ 1.02
ABCD4-228ENST00000557588 DGKHQ86XP1 1220 aa21.43■■□□□ 1.02
ABCD4-228ENST00000557588 DHX37Q8IY37 1157 aaKnown RBP21.43■■□□□ 1.02
ABCD4-228ENST00000557588 ADGRF4Q8IZF3 695 aa21.43■■□□□ 1.02
ABCD4-228ENST00000557588 BANK1Q8NDB2 785 aa21.43■■□□□ 1.02
ABCD4-228ENST00000557588 UIMC1Q96RL1 719 aa21.43■■□□□ 1.02
ABCD4-228ENST00000557588 RNF41Q9H4P4 317 aaPredicted RBP21.43■■□□□ 1.02
ABCD4-228ENST00000557588 PRKAG3Q9UGI9 489 aa21.43■■□□□ 1.02
ABCD4-228ENST00000557588 PCDHB15Q9Y5E8 787 aa21.43■■□□□ 1.02
ABCD4-228ENST00000557588 NEDD4P46934 1319 aa21.43■■□□□ 1.02
ABCD4-228ENST00000557588 RSPH10B2B2RC85 870 aa21.42■■□□□ 1.02
ABCD4-228ENST00000557588 PPFIA4O75335 1185 aa21.42■■□□□ 1.02
ABCD4-228ENST00000557588 NR3C2P08235 984 aa21.42■■□□□ 1.02
ABCD4-228ENST00000557588 RSPH10BP0C881 870 aa21.42■■□□□ 1.02
ABCD4-228ENST00000557588 HOXC8P31273 242 aa21.42■■□□□ 1.02
ABCD4-228ENST00000557588 NT5C2P49902 561 aa21.42■■□□□ 1.02
ABCD4-228ENST00000557588 NHLH1Q02575 133 aa21.42■■□□□ 1.02
ABCD4-228ENST00000557588 GHRHRQ02643 423 aa21.42■■□□□ 1.02
ABCD4-228ENST00000557588 QRICH1Q2TAL8 776 aa21.42■■□□□ 1.02
ABCD4-228ENST00000557588 PNMA1Q8ND90 353 aa21.42■■□□□ 1.02
ABCD4-228ENST00000557588 ESR2Q92731 530 aa21.42■■□□□ 1.02
ABCD4-228ENST00000557588 FAM50BQ9Y247 325 aa21.42■■□□□ 1.02
ABCD4-228ENST00000557588 MRPL11Q9Y3B7 192 aaKnown RBP21.42■■□□□ 1.02
ABCD4-228ENST00000557588 CCDC171Q6TFL3 1326 aa21.41■■□□□ 1.02
ABCD4-228ENST00000557588 THPOP40225 353 aa21.41■■□□□ 1.02
ABCD4-228ENST00000557588 ASPRV1Q53RT3 343 aa21.41■■□□□ 1.02
ABCD4-228ENST00000557588 MYSM1Q5VVJ2 828 aa21.41■■□□□ 1.02
ABCD4-228ENST00000557588 FBXO11Q86XK2 927 aa21.41■■□□□ 1.02
ABCD4-228ENST00000557588 C19orf67A6NJJ6 358 aa21.4■■□□□ 1.02
ABCD4-228ENST00000557588 RGS20O76081 388 aa21.4■■□□□ 1.02
ABCD4-228ENST00000557588 HSD17B4P51659 736 aa21.4■■□□□ 1.02
ABCD4-228ENST00000557588 GPM6BQ13491 265 aa21.4■■□□□ 1.02
ABCD4-228ENST00000557588 HSDL1Q3SXM5 330 aa21.4■■□□□ 1.02
ABCD4-228ENST00000557588 TCEAL5Q5H9L2 206 aa21.4■■□□□ 1.02
ABCD4-228ENST00000557588 CELF3Q5SZQ8 465 aaKnown RBP21.4■■□□□ 1.02
ABCD4-228ENST00000557588 YME1L1Q96TA2 773 aa21.4■■□□□ 1.02
ABCD4-228ENST00000557588 ZKSCAN3Q9BRR0 538 aa21.4■■□□□ 1.02
ABCD4-228ENST00000557588 NSUN3Q9H649 340 aaKnown RBP21.4■■□□□ 1.02
ABCD4-228ENST00000557588 C5orf42Q9H799 3197 aa21.39■■□□□ 1.02
ABCD4-228ENST00000557588 OPLAHO14841 1288 aa21.39■■□□□ 1.01
ABCD4-228ENST00000557588 CAND2O75155 1236 aa21.39■■□□□ 1.01
ABCD4-228ENST00000557588 KCNV1Q6PIU1 500 aa21.39■■□□□ 1.01
ABCD4-228ENST00000557588 TMEM192Q8IY95 271 aa21.39■■□□□ 1.01
ABCD4-228ENST00000557588 ANKS1AQ92625 1134 aa21.39■■□□□ 1.01
ABCD4-228ENST00000557588 TOP1MTQ969P6 601 aa21.39■■□□□ 1.01
ABCD4-228ENST00000557588 SPATA33Q96N06 139 aa21.39■■□□□ 1.01
ABCD4-228ENST00000557588 PDCD2LQ9BRP1 358 aa21.39■■□□□ 1.01
ABCD4-228ENST00000557588 C16orf70Q9BSU1 422 aa21.39■■□□□ 1.01
ABCD4-228ENST00000557588 NMIQ13287 307 aaPredicted RBP21.38■■□□□ 1.01
ABCD4-228ENST00000557588 CCDC178Q5BJE1 867 aa21.38■■□□□ 1.01
ABCD4-228ENST00000557588 ADHFE1Q8IWW8 467 aa21.38■■□□□ 1.01
ABCD4-228ENST00000557588 SEPT8Q92599 483 aa21.38■■□□□ 1.01
ABCD4-228ENST00000557588 FBXL18Q96ME1 805 aa21.38■■□□□ 1.01
ABCD4-228ENST00000557588 KAT14Q9H8E8 782 aa21.38■■□□□ 1.01
ABCD4-228ENST00000557588 JMJD4Q9H9V9 463 aa21.38■■□□□ 1.01
ABCD4-228ENST00000557588 TRIOO75962 3097 aa21.37■■□□□ 1.01
ABCD4-228ENST00000557588 C17orf102A2RUQ5 167 aa21.37■■□□□ 1.01
ABCD4-228ENST00000557588 GGPS1O95749 300 aa21.37■■□□□ 1.01
ABCD4-228ENST00000557588 CFBP00751 764 aa21.37■■□□□ 1.01
ABCD4-228ENST00000557588 UBA1P22314 1058 aaKnown RBP21.37■■□□□ 1.01
ABCD4-228ENST00000557588 PDE1AP54750 535 aa21.37■■□□□ 1.01
ABCD4-228ENST00000557588 IQCA1Q86XH1 822 aa21.37■■□□□ 1.01
ABCD4-228ENST00000557588 ATP6V0A1Q93050 837 aa21.37■■□□□ 1.01
ABCD4-228ENST00000557588 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.36■■□□□ 1.01
ABCD4-228ENST00000557588 STOX1Q6ZVD7 989 aa21.36■■□□□ 1.01
ABCD4-228ENST00000557588 MAP3K20Q9NYL2 800 aaKnown RBP21.36■■□□□ 1.01
ABCD4-228ENST00000557588 NCK2O43639 380 aa21.35■■□□□ 1.01
ABCD4-228ENST00000557588 DHX16O60231 1041 aaKnown RBP21.35■■□□□ 1.01
ABCD4-228ENST00000557588 PARP1P09874 1014 aaKnown RBP21.35■■□□□ 1.01
ABCD4-228ENST00000557588 SMIM10L2AP0DMW4 78 aa21.35■■□□□ 1.01
ABCD4-228ENST00000557588 SMIM10L2BP0DMW5 78 aa21.35■■□□□ 1.01
ABCD4-228ENST00000557588 TGFB3P10600 412 aa21.35■■□□□ 1.01
ABCD4-228ENST00000557588 LTBRP36941 435 aa21.35■■□□□ 1.01
ABCD4-228ENST00000557588 SP2Q02086 613 aa21.35■■□□□ 1.01
ABCD4-228ENST00000557588 CTC1Q2NKJ3 1217 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms