RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 PXMP2Q9NR77 195 aa9.57□□□□□ -0.88
PSEN1-223ENST00000557511 PRKAG2Q9UGJ0 569 aa9.57□□□□□ -0.88
PSEN1-223ENST00000557511 RBBP6Q7Z6E9 1792 aaKnown RBP9.57□□□□□ -0.88
PSEN1-223ENST00000557511 hCG_1642624A0A1W2PR95 340 aa9.56□□□□□ -0.88
PSEN1-223ENST00000557511 STAM2O75886 525 aa9.56□□□□□ -0.88
PSEN1-223ENST00000557511 CABYRO75952 493 aa9.56□□□□□ -0.88
PSEN1-223ENST00000557511 TXNP10599 105 aaKnown RBP9.56□□□□□ -0.88
PSEN1-223ENST00000557511 XBP1P17861 261 aa9.56□□□□□ -0.88
PSEN1-223ENST00000557511 PDIA3P30101 505 aaKnown RBP9.56□□□□□ -0.88
PSEN1-223ENST00000557511 ADD1P35611 737 aaKnown RBP9.56□□□□□ -0.88
PSEN1-223ENST00000557511 CPT1AP50416 773 aa9.56□□□□□ -0.88
PSEN1-223ENST00000557511 ADCY7P51828 1080 aa9.56□□□□□ -0.88
PSEN1-223ENST00000557511 CCT2P78371 535 aaKnown RBP9.56□□□□□ -0.88
PSEN1-223ENST00000557511 SSRP1Q08945 709 aaKnown RBP9.56□□□□□ -0.88
PSEN1-223ENST00000557511 STK3Q13188 491 aa9.56□□□□□ -0.88
PSEN1-223ENST00000557511 DUSP28Q4G0W2 176 aa9.56□□□□□ -0.88
PSEN1-223ENST00000557511 MCTP2Q6DN12 878 aa9.56□□□□□ -0.88
PSEN1-223ENST00000557511 SEPT14Q6ZU15 432 aa9.56□□□□□ -0.88
PSEN1-223ENST00000557511 TLK2Q86UE8 772 aa9.56□□□□□ -0.88
PSEN1-223ENST00000557511 CCDC148Q8NFR7 591 aa9.56□□□□□ -0.88
PSEN1-223ENST00000557511 GLT1D1Q96MS3 346 aa9.56□□□□□ -0.88
PSEN1-223ENST00000557511 SLC26A6Q9BXS9 759 aa9.56□□□□□ -0.88
PSEN1-223ENST00000557511 C6orf50Q9HD87 102 aa9.56□□□□□ -0.88
PSEN1-223ENST00000557511 Q9Y3F1 56 aa9.56□□□□□ -0.88
PSEN1-223ENST00000557511 MRVI1Q9Y6F6 885 aa9.56□□□□□ -0.88
PSEN1-223ENST00000557511 CNTNAP5Q8WYK1 1306 aa9.56□□□□□ -0.88
PSEN1-223ENST00000557511 SYNRGQ9UMZ2 1314 aa9.56□□□□□ -0.88
PSEN1-223ENST00000557511 KIAA0100Q14667 2235 aaKnown RBP9.55□□□□□ -0.88
PSEN1-223ENST00000557511 PIK3CDO00329 1044 aa9.55□□□□□ -0.88
PSEN1-223ENST00000557511 PRPF3O43395 683 aaKnown RBP9.55□□□□□ -0.88
PSEN1-223ENST00000557511 FOSP01100 380 aaPredicted RBP9.55□□□□□ -0.88
PSEN1-223ENST00000557511 SCG2P13521 617 aa9.55□□□□□ -0.88
PSEN1-223ENST00000557511 EDNRBP24530 442 aa9.55□□□□□ -0.88
PSEN1-223ENST00000557511 GNA11P29992 359 aa9.55□□□□□ -0.88
PSEN1-223ENST00000557511 CDC27P30260 824 aa9.55□□□□□ -0.88
PSEN1-223ENST00000557511 NEK4P51957 841 aa9.55□□□□□ -0.88
PSEN1-223ENST00000557511 GJA9P57773 515 aa9.55□□□□□ -0.88
PSEN1-223ENST00000557511 GHRHRQ02643 423 aa9.55□□□□□ -0.88
PSEN1-223ENST00000557511 COL9A3Q14050 684 aaPredicted RBP9.55□□□□□ -0.88
PSEN1-223ENST00000557511 SLC35G1Q2M3R5 365 aa9.55□□□□□ -0.88
PSEN1-223ENST00000557511 PRPF38BQ5VTL8 546 aaKnown RBP9.55□□□□□ -0.88
PSEN1-223ENST00000557511 TAPT1Q6NXT6 567 aa9.55□□□□□ -0.88
PSEN1-223ENST00000557511 XRRA1Q6P2D8 792 aa9.55□□□□□ -0.88
PSEN1-223ENST00000557511 THSD4Q6ZMP0 1018 aa9.55□□□□□ -0.88
PSEN1-223ENST00000557511 UBE2Q1Q7Z7E8 422 aa9.55□□□□□ -0.88
PSEN1-223ENST00000557511 NLRX1Q86UT6 975 aa9.55□□□□□ -0.88
PSEN1-223ENST00000557511 OR6J1Q8NGC5 347 aa9.55□□□□□ -0.88
PSEN1-223ENST00000557511 BICD2Q8TD16 824 aa9.55□□□□□ -0.88
PSEN1-223ENST00000557511 GPKOWQ92917 476 aaPredicted RBP eCLIP9.55□□□□□ -0.88
PSEN1-223ENST00000557511 FERMT2Q96AC1 680 aa9.55□□□□□ -0.88
PSEN1-223ENST00000557511 LRCH3Q96II8 777 aa9.55□□□□□ -0.88
PSEN1-223ENST00000557511 PDCD2LQ9BRP1 358 aa9.55□□□□□ -0.88
PSEN1-223ENST00000557511 RNF26Q9BY78 433 aaPredicted RBP9.55□□□□□ -0.88
PSEN1-223ENST00000557511 C22orf23Q9BZE7 217 aa9.55□□□□□ -0.88
PSEN1-223ENST00000557511 ALDH8A1Q9H2A2 487 aaPredicted RBP9.55□□□□□ -0.88
PSEN1-223ENST00000557511 STARD7Q9NQZ5 370 aa9.55□□□□□ -0.88
PSEN1-223ENST00000557511 PDGFCQ9NRA1 345 aa9.55□□□□□ -0.88
PSEN1-223ENST00000557511 POLR3EQ9NVU0 708 aa9.55□□□□□ -0.88
PSEN1-223ENST00000557511 BARHL2Q9NY43 387 aa9.55□□□□□ -0.88
PSEN1-223ENST00000557511 GTF3C3Q9Y5Q9 886 aa9.55□□□□□ -0.88
PSEN1-223ENST00000557511 PLXNA1Q9UIW2 1896 aa9.54□□□□□ -0.88
PSEN1-223ENST00000557511 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.54□□□□□ -0.88
PSEN1-223ENST00000557511 SMCO2A6NFE2 343 aa9.54□□□□□ -0.88
PSEN1-223ENST00000557511 C3orf80F5H4A9 247 aa9.54□□□□□ -0.88
PSEN1-223ENST00000557511 KPNA6O60684 536 aa9.54□□□□□ -0.88
PSEN1-223ENST00000557511 ADAMTS4O75173 837 aa9.54□□□□□ -0.88
PSEN1-223ENST00000557511 DEXIO95424 95 aa9.54□□□□□ -0.88
PSEN1-223ENST00000557511 GH1P01241 217 aa9.54□□□□□ -0.88
PSEN1-223ENST00000557511 ASGR1P07306 291 aa9.54□□□□□ -0.88
PSEN1-223ENST00000557511 IFNAR1P17181 557 aa9.54□□□□□ -0.88
PSEN1-223ENST00000557511 SMPD1P17405 629 aa9.54□□□□□ -0.88
PSEN1-223ENST00000557511 CST5P28325 142 aaPredicted RBP9.54□□□□□ -0.88
PSEN1-223ENST00000557511 ACLYP53396 1101 aa9.54□□□□□ -0.88
PSEN1-223ENST00000557511 EVCP57679 992 aa9.54□□□□□ -0.88
PSEN1-223ENST00000557511 TOB2Q14106 344 aaPredicted RBP9.54□□□□□ -0.88
PSEN1-223ENST00000557511 PGM5Q15124 567 aa9.54□□□□□ -0.88
PSEN1-223ENST00000557511 KCNA10Q16322 511 aa9.54□□□□□ -0.88
PSEN1-223ENST00000557511 FSCN1Q16658 493 aaKnown RBP9.54□□□□□ -0.88
PSEN1-223ENST00000557511 PFKFB3Q16875 520 aaPredicted RBP9.54□□□□□ -0.88
PSEN1-223ENST00000557511 WWC2Q6AWC2 1192 aa9.54□□□□□ -0.88
PSEN1-223ENST00000557511 USP17L6PQ6QN14 398 aa9.54□□□□□ -0.88
PSEN1-223ENST00000557511 VSIG10LQ86VR7 867 aa9.54□□□□□ -0.88
PSEN1-223ENST00000557511 DHX37Q8IY37 1157 aaKnown RBP9.54□□□□□ -0.88
PSEN1-223ENST00000557511 C7orf61Q8IZ16 206 aa9.54□□□□□ -0.88
PSEN1-223ENST00000557511 IL27Q8NEV9 243 aa9.54□□□□□ -0.88
PSEN1-223ENST00000557511 WASF1Q92558 559 aa9.54□□□□□ -0.88
PSEN1-223ENST00000557511 LENG1Q96BZ8 264 aaPredicted RBP9.54□□□□□ -0.88
PSEN1-223ENST00000557511 KATNBL1Q9H079 304 aa9.54□□□□□ -0.88
PSEN1-223ENST00000557511 UPF3AQ9H1J1 476 aaKnown RBP9.54□□□□□ -0.88
PSEN1-223ENST00000557511 COL20A1Q9P218 1284 aa9.54□□□□□ -0.88
PSEN1-223ENST00000557511 PHF24Q9UPV7 400 aa9.54□□□□□ -0.88
PSEN1-223ENST00000557511 ATP11BQ9Y2G3 1177 aa9.54□□□□□ -0.88
PSEN1-223ENST00000557511 ZNFX1Q9P2E3 1918 aaKnown RBP9.54□□□□□ -0.88
PSEN1-223ENST00000557511 ASTN1O14525 1302 aa9.54□□□□□ -0.88
PSEN1-223ENST00000557511 MROH7Q68CQ1 1323 aa9.54□□□□□ -0.88
PSEN1-223ENST00000557511 NID2Q14112 1375 aa9.53□□□□□ -0.88
PSEN1-223ENST00000557511 A0A0U1RQG5 324 aaPredicted RBP9.53□□□□□ -0.88
PSEN1-223ENST00000557511 A0A1W2PQ45 241 aaPredicted RBP9.53□□□□□ -0.88
PSEN1-223ENST00000557511 A0A1W2PQY0 241 aa9.53□□□□□ -0.88
PSEN1-223ENST00000557511 RBM47A0AV96 593 aaKnown RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms