RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 HAS3O00219 553 aa16.41■□□□□ 0.22
SLIRP-210ENST00000557431 CXCL10P02778 98 aa16.41■□□□□ 0.22
SLIRP-210ENST00000557431 HSDL1Q3SXM5 330 aa16.41■□□□□ 0.22
SLIRP-210ENST00000557431 MCF2L2Q86YR7 1114 aa16.41■□□□□ 0.22
SLIRP-210ENST00000557431 DHX37Q8IY37 1157 aaKnown RBP16.41■□□□□ 0.22
SLIRP-210ENST00000557431 ANKS1AQ92625 1134 aa16.41■□□□□ 0.22
SLIRP-210ENST00000557431 IWS1Q96ST2 819 aa16.41■□□□□ 0.22
SLIRP-210ENST00000557431 PDCD2LQ9BRP1 358 aa16.41■□□□□ 0.22
SLIRP-210ENST00000557431 SUGCTQ9HAC7 445 aa16.41■□□□□ 0.22
SLIRP-210ENST00000557431 SENP2Q9HC62 589 aa16.41■□□□□ 0.22
SLIRP-210ENST00000557431 BDP1A6H8Y1 2624 aa16.41■□□□□ 0.22
SLIRP-210ENST00000557431 LINC01553A4QN01 128 aa16.4■□□□□ 0.22
SLIRP-210ENST00000557431 GJB5O95377 273 aa16.4■□□□□ 0.22
SLIRP-210ENST00000557431 GGPS1O95749 300 aa16.4■□□□□ 0.22
SLIRP-210ENST00000557431 F2P00734 622 aa16.4■□□□□ 0.22
SLIRP-210ENST00000557431 SP2Q02086 613 aa16.4■□□□□ 0.22
SLIRP-210ENST00000557431 RBL2Q08999 1139 aa16.4■□□□□ 0.22
SLIRP-210ENST00000557431 IMMTQ16891 758 aaKnown RBP16.4■□□□□ 0.22
SLIRP-210ENST00000557431 AAK1Q2M2I8 961 aa16.4■□□□□ 0.22
SLIRP-210ENST00000557431 IFIT1BQ5T764 474 aaKnown RBP16.4■□□□□ 0.22
SLIRP-210ENST00000557431 HLA-CQ95604 372 aa16.4■□□□□ 0.22
SLIRP-210ENST00000557431 AMNQ9BXJ7 453 aa16.4■□□□□ 0.22
SLIRP-210ENST00000557431 MAD2L2Q9UI95 211 aa16.4■□□□□ 0.22
SLIRP-210ENST00000557431 FAM86C2PA6NEL3 165 aa16.39■□□□□ 0.21
SLIRP-210ENST00000557431 KLRF2D3W0D1 207 aa16.39■□□□□ 0.21
SLIRP-210ENST00000557431 EIF3JO75822 258 aaKnown RBP16.39■□□□□ 0.21
SLIRP-210ENST00000557431 UBA1P22314 1058 aaKnown RBP16.39■□□□□ 0.21
SLIRP-210ENST00000557431 HSD17B4P51659 736 aa16.39■□□□□ 0.21
SLIRP-210ENST00000557431 PGM5Q15124 567 aa16.39■□□□□ 0.21
SLIRP-210ENST00000557431 SEC23AQ15436 765 aa16.39■□□□□ 0.21
SLIRP-210ENST00000557431 CCDC178Q5BJE1 867 aa16.39■□□□□ 0.21
SLIRP-210ENST00000557431 MYSM1Q5VVJ2 828 aa16.39■□□□□ 0.21
SLIRP-210ENST00000557431 FCHSD1Q86WN1 690 aa16.39■□□□□ 0.21
SLIRP-210ENST00000557431 PPTC7Q8NI37 304 aa16.39■□□□□ 0.21
SLIRP-210ENST00000557431 PIBF1Q8WXW3 757 aa16.39■□□□□ 0.21
SLIRP-210ENST00000557431 SPATA33Q96N06 139 aa16.39■□□□□ 0.21
SLIRP-210ENST00000557431 PIGSQ96S52 555 aa16.39■□□□□ 0.21
SLIRP-210ENST00000557431 C17orf80Q9BSJ5 609 aa16.39■□□□□ 0.21
SLIRP-210ENST00000557431 UBAC1Q9BSL1 405 aa16.39■□□□□ 0.21
SLIRP-210ENST00000557431 DSCC1Q9BVC3 393 aa16.39■□□□□ 0.21
SLIRP-210ENST00000557431 CD320Q9NPF0 282 aa16.39■□□□□ 0.21
SLIRP-210ENST00000557431 TELO2Q9Y4R8 837 aa16.39■□□□□ 0.21
SLIRP-210ENST00000557431 CTSHP09668 335 aa16.38■□□□□ 0.21
SLIRP-210ENST00000557431 NUCB1Q02818 461 aa16.38■□□□□ 0.21
SLIRP-210ENST00000557431 PTK7Q13308 1070 aa16.38■□□□□ 0.21
SLIRP-210ENST00000557431 LAMC2Q13753 1193 aa16.38■□□□□ 0.21
SLIRP-210ENST00000557431 CELF3Q5SZQ8 465 aaKnown RBP16.38■□□□□ 0.21
SLIRP-210ENST00000557431 DBF4BQ8NFT6 615 aa16.38■□□□□ 0.21
SLIRP-210ENST00000557431 EXOC6Q8TAG9 804 aa16.38■□□□□ 0.21
SLIRP-210ENST00000557431 EMID1Q96A84 441 aaPredicted RBP16.38■□□□□ 0.21
SLIRP-210ENST00000557431 KATNAL1Q9BW62 490 aa16.38■□□□□ 0.21
SLIRP-210ENST00000557431 OSBPL3Q9H4L5 887 aa16.38■□□□□ 0.21
SLIRP-210ENST00000557431 COG5Q9UP83 839 aa16.38■□□□□ 0.21
SLIRP-210ENST00000557431 PCDHA1Q9Y5I3 950 aa16.38■□□□□ 0.21
SLIRP-210ENST00000557431 TAF6LQ9Y6J9 622 aa16.38■□□□□ 0.21
SLIRP-210ENST00000557431 ABHD14A-ACY1A0A1B0GW23 586 aa16.37■□□□□ 0.21
SLIRP-210ENST00000557431 LGR5O75473 907 aa16.37■□□□□ 0.21
SLIRP-210ENST00000557431 THPOP40225 353 aa16.37■□□□□ 0.21
SLIRP-210ENST00000557431 IKBKEQ14164 716 aa16.37■□□□□ 0.21
SLIRP-210ENST00000557431 TICAM2Q86XR7 235 aa16.37■□□□□ 0.21
SLIRP-210ENST00000557431 MYOCDQ8IZQ8 938 aa16.37■□□□□ 0.21
SLIRP-210ENST00000557431 MTMR8Q96EF0 704 aa16.37■□□□□ 0.21
SLIRP-210ENST00000557431 YTHDC1Q96MU7 727 aaKnown RBP16.37■□□□□ 0.21
SLIRP-210ENST00000557431 TGS1Q96RS0 853 aaKnown RBP16.37■□□□□ 0.21
SLIRP-210ENST00000557431 C16orf70Q9BSU1 422 aa16.37■□□□□ 0.21
SLIRP-210ENST00000557431 LRFN3Q9BTN0 628 aa16.37■□□□□ 0.21
SLIRP-210ENST00000557431 KRT23Q9C075 422 aa16.37■□□□□ 0.21
SLIRP-210ENST00000557431 RWDD1Q9H446 243 aaPredicted RBP16.37■□□□□ 0.21
SLIRP-210ENST00000557431 ZBTB5O15062 677 aa16.36■□□□□ 0.21
SLIRP-210ENST00000557431 CYTH3O43739 400 aa16.36■□□□□ 0.21
SLIRP-210ENST00000557431 HOXD8P13378 290 aaPredicted RBP16.36■□□□□ 0.21
SLIRP-210ENST00000557431 ERVK-21P61565 698 aa16.36■□□□□ 0.21
SLIRP-210ENST00000557431 RAD9AQ99638 391 aa16.36■□□□□ 0.21
SLIRP-210ENST00000557431 SUPT16HQ9Y5B9 1047 aaKnown RBP16.36■□□□□ 0.21
SLIRP-210ENST00000557431 EVPLQ92817 2033 aa16.35■□□□□ 0.21
SLIRP-210ENST00000557431 PALM3A6NDB9 673 aaPredicted RBP16.35■□□□□ 0.21
SLIRP-210ENST00000557431 TREHO43280 583 aa16.35■□□□□ 0.21
SLIRP-210ENST00000557431 UPP2O95045 317 aa16.35■□□□□ 0.21
SLIRP-210ENST00000557431 PLA2G5P39877 138 aa16.35■□□□□ 0.21
SLIRP-210ENST00000557431 GHRHRQ02643 423 aa16.35■□□□□ 0.21
SLIRP-210ENST00000557431 STOX1Q6ZVD7 989 aa16.35■□□□□ 0.21
SLIRP-210ENST00000557431 VSIG10LQ86VR7 867 aa16.35■□□□□ 0.21
SLIRP-210ENST00000557431 TRIM50Q86XT4 487 aa16.35■□□□□ 0.21
SLIRP-210ENST00000557431 C1QTNF1Q9BXJ1 281 aa16.35■□□□□ 0.21
SLIRP-210ENST00000557431 UBE2ZQ9H832 354 aaPredicted RBP16.35■□□□□ 0.21
SLIRP-210ENST00000557431 MLXIPQ9HAP2 919 aa16.35■□□□□ 0.21
SLIRP-210ENST00000557431 C11orf16Q9NQ32 467 aa16.35■□□□□ 0.21
SLIRP-210ENST00000557431 C17orf102A2RUQ5 167 aa16.34■□□□□ 0.21
SLIRP-210ENST00000557431 RSPH10B2B2RC85 870 aa16.34■□□□□ 0.21
SLIRP-210ENST00000557431 LGALS2P05162 132 aa16.34■□□□□ 0.21
SLIRP-210ENST00000557431 RSPH10BP0C881 870 aa16.34■□□□□ 0.21
SLIRP-210ENST00000557431 SMIM10L2AP0DMW4 78 aa16.34■□□□□ 0.21
SLIRP-210ENST00000557431 SMIM10L2BP0DMW5 78 aa16.34■□□□□ 0.21
SLIRP-210ENST00000557431 GSPT1P15170 499 aaKnown RBP16.34■□□□□ 0.21
SLIRP-210ENST00000557431 IL9P15248 144 aa16.34■□□□□ 0.21
SLIRP-210ENST00000557431 PDE4AP27815 886 aa16.34■□□□□ 0.21
SLIRP-210ENST00000557431 CCND2P30279 289 aa16.34■□□□□ 0.21
SLIRP-210ENST00000557431 SP4Q02446 784 aa16.34■□□□□ 0.21
SLIRP-210ENST00000557431 PTH1RQ03431 593 aa16.34■□□□□ 0.21
SLIRP-210ENST00000557431 SEMA3FQ13275 785 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 117.9 ms