RNA–Protein interactions for RNA: ENST00000557418.1

FOXA1-205, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 392 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-205ENST00000557418 NBPF20Q3BBV1 942 aa24.24■■□□□ 1.47
FOXA1-205ENST00000557418 KCNV1Q6PIU1 500 aa24.24■■□□□ 1.47
FOXA1-205ENST00000557418 TMTC3Q6ZXV5 915 aa24.24■■□□□ 1.47
FOXA1-205ENST00000557418 HIPK3Q9H422 1215 aa24.24■■□□□ 1.47
FOXA1-205ENST00000557418 SH2B1Q9NRF2 756 aaPredicted RBP24.24■■□□□ 1.47
FOXA1-205ENST00000557418 CYP2C18P33260 490 aa24.23■■□□□ 1.47
FOXA1-205ENST00000557418 LAMC2Q13753 1193 aa24.23■■□□□ 1.47
FOXA1-205ENST00000557418 FAM47CQ5HY64 1035 aa24.23■■□□□ 1.47
FOXA1-205ENST00000557418 CCDC82Q8N4S0 544 aa24.23■■□□□ 1.47
FOXA1-205ENST00000557418 CUL5Q93034 780 aa24.23■■□□□ 1.47
FOXA1-205ENST00000557418 RNPC3Q96LT9 517 aaKnown RBP24.23■■□□□ 1.47
FOXA1-205ENST00000557418 CSF2RAP15509 400 aa24.22■■□□□ 1.47
FOXA1-205ENST00000557418 Q7L0L9 218 aa24.22■■□□□ 1.47
FOXA1-205ENST00000557418 DHX37Q8IY37 1157 aaKnown RBP24.22■■□□□ 1.47
FOXA1-205ENST00000557418 SMARCC2Q8TAQ2 1214 aa24.22■■□□□ 1.47
FOXA1-205ENST00000557418 CCDC196A0A1B0GTZ2 297 aa24.21■■□□□ 1.47
FOXA1-205ENST00000557418 CTDNEP1O95476 244 aa24.21■■□□□ 1.47
FOXA1-205ENST00000557418 MMP3P08254 477 aa24.21■■□□□ 1.47
FOXA1-205ENST00000557418 CHMP4BP1P59074 171 aa24.21■■□□□ 1.47
FOXA1-205ENST00000557418 NFRKBQ6P4R8 1299 aa24.21■■□□□ 1.47
FOXA1-205ENST00000557418 IL31RAQ8NI17 732 aa24.21■■□□□ 1.47
FOXA1-205ENST00000557418 ZFP91Q96JP5 570 aaPredicted RBP24.21■■□□□ 1.47
FOXA1-205ENST00000557418 TRMT13Q9NUP7 481 aaKnown RBP24.21■■□□□ 1.47
FOXA1-205ENST00000557418 SCN10AQ9Y5Y9 1956 aa24.21■■□□□ 1.47
FOXA1-205ENST00000557418 CNTNAP5Q8WYK1 1306 aa24.2■■□□□ 1.46
FOXA1-205ENST00000557418 K7ELQ4 463 aaPredicted RBP24.2■■□□□ 1.46
FOXA1-205ENST00000557418 RGS20O76081 388 aa24.2■■□□□ 1.46
FOXA1-205ENST00000557418 TGFB3P10600 412 aa24.2■■□□□ 1.46
FOXA1-205ENST00000557418 PTPN11Q06124 597 aaPredicted RBP24.2■■□□□ 1.46
FOXA1-205ENST00000557418 DGKDQ16760 1214 aa24.2■■□□□ 1.46
FOXA1-205ENST00000557418 EMID1Q96A84 441 aaPredicted RBP24.2■■□□□ 1.46
FOXA1-205ENST00000557418 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.2■■□□□ 1.46
FOXA1-205ENST00000557418 NOC4LQ9BVI4 516 aaKnown RBP24.2■■□□□ 1.46
FOXA1-205ENST00000557418 hCG_1642624A0A1W2PR95 340 aa24.19■■□□□ 1.46
FOXA1-205ENST00000557418 IFNAR1P17181 557 aa24.19■■□□□ 1.46
FOXA1-205ENST00000557418 CUL4AQ13619 759 aa24.19■■□□□ 1.46
FOXA1-205ENST00000557418 FAM109BQ6ICB4 259 aaPredicted RBP24.19■■□□□ 1.46
FOXA1-205ENST00000557418 USP17L6PQ6QN14 398 aa24.19■■□□□ 1.46
FOXA1-205ENST00000557418 C16orf59Q7L2K0 433 aa24.19■■□□□ 1.46
FOXA1-205ENST00000557418 CCDC83Q8IWF9 413 aa24.19■■□□□ 1.46
FOXA1-205ENST00000557418 PSTPIP2Q9H939 334 aa24.19■■□□□ 1.46
FOXA1-205ENST00000557418 MTMR10Q9NXD2 777 aa24.19■■□□□ 1.46
FOXA1-205ENST00000557418 PIK3CDO00329 1044 aa24.18■■□□□ 1.46
FOXA1-205ENST00000557418 STAM2O75886 525 aa24.18■■□□□ 1.46
FOXA1-205ENST00000557418 ACRP10323 421 aa24.18■■□□□ 1.46
FOXA1-205ENST00000557418 CYP2C9P11712 490 aa24.18■■□□□ 1.46
FOXA1-205ENST00000557418 CCL23P55773 120 aa24.18■■□□□ 1.46
FOXA1-205ENST00000557418 SMAD3P84022 425 aaKnown RBP24.18■■□□□ 1.46
FOXA1-205ENST00000557418 TMEM240Q5SV17 173 aa24.18■■□□□ 1.46
FOXA1-205ENST00000557418 HSCBQ8IWL3 235 aa24.18■■□□□ 1.46
FOXA1-205ENST00000557418 PPP1R13LQ8WUF5 828 aa24.18■■□□□ 1.46
FOXA1-205ENST00000557418 IL23AQ9NPF7 189 aa24.18■■□□□ 1.46
FOXA1-205ENST00000557418 RBM19Q9Y4C8 960 aaKnown RBP24.18■■□□□ 1.46
FOXA1-205ENST00000557418 UMODL1Q5DID0 1318 aa24.17■■□□□ 1.46
FOXA1-205ENST00000557418 MEIS2O14770 477 aa24.17■■□□□ 1.46
FOXA1-205ENST00000557418 GNPTABQ3T906 1256 aa24.17■■□□□ 1.46
FOXA1-205ENST00000557418 CELF3Q5SZQ8 465 aaKnown RBP24.17■■□□□ 1.46
FOXA1-205ENST00000557418 MYSM1Q5VVJ2 828 aa24.17■■□□□ 1.46
FOXA1-205ENST00000557418 ZNF365Q70YC5 407 aa24.17■■□□□ 1.46
FOXA1-205ENST00000557418 NSUN7Q8NE18 718 aaKnown RBP24.17■■□□□ 1.46
FOXA1-205ENST00000557418 PPTC7Q8NI37 304 aa24.17■■□□□ 1.46
FOXA1-205ENST00000557418 RTEL1Q9NZ71 1219 aa24.17■■□□□ 1.46
FOXA1-205ENST00000557418 HSFX4A0A1B0GTS1 333 aaPredicted RBP24.16■■□□□ 1.46
FOXA1-205ENST00000557418 HSFX3A0A1B0GWH4 333 aaPredicted RBP24.16■■□□□ 1.46
FOXA1-205ENST00000557418 SORBS3O60504 671 aa24.16■■□□□ 1.46
FOXA1-205ENST00000557418 DTNBO60941 627 aa24.16■■□□□ 1.46
FOXA1-205ENST00000557418 PPFIA4O75335 1185 aa24.16■■□□□ 1.46
FOXA1-205ENST00000557418 GGPS1O95749 300 aa24.16■■□□□ 1.46
FOXA1-205ENST00000557418 MRPS9P82933 396 aaKnown RBP24.16■■□□□ 1.46
FOXA1-205ENST00000557418 SP2Q02086 613 aa24.16■■□□□ 1.46
FOXA1-205ENST00000557418 PSRC1Q6PGN9 363 aaPredicted RBP24.16■■□□□ 1.46
FOXA1-205ENST00000557418 RPUSD2Q8IZ73 545 aaKnown RBP24.16■■□□□ 1.46
FOXA1-205ENST00000557418 KAT2BQ92831 832 aa24.16■■□□□ 1.46
FOXA1-205ENST00000557418 SPATA33Q96N06 139 aa24.16■■□□□ 1.46
FOXA1-205ENST00000557418 MLXIPQ9HAP2 919 aa24.16■■□□□ 1.46
FOXA1-205ENST00000557418 NOD1Q9Y239 953 aa24.16■■□□□ 1.46
FOXA1-205ENST00000557418 FRMPD4Q14CM0 1322 aa24.15■■□□□ 1.46
FOXA1-205ENST00000557418 CPLX1O14810 134 aa24.15■■□□□ 1.46
FOXA1-205ENST00000557418 FGBP02675 491 aa24.15■■□□□ 1.46
FOXA1-205ENST00000557418 ZNF697Q5TEC3 545 aa24.15■■□□□ 1.46
FOXA1-205ENST00000557418 XRRA1Q6P2D8 792 aa24.15■■□□□ 1.46
FOXA1-205ENST00000557418 HEATR3Q7Z4Q2 680 aa24.15■■□□□ 1.46
FOXA1-205ENST00000557418 PHKBQ93100 1093 aa24.15■■□□□ 1.46
FOXA1-205ENST00000557418 RETREG2Q8NC44 543 aa24.14■■□□□ 1.45
FOXA1-205ENST00000557418 GPKOWQ92917 476 aaPredicted RBP eCLIP24.14■■□□□ 1.45
FOXA1-205ENST00000557418 LLPHQ9BRT6 129 aaKnown RBP24.14■■□□□ 1.45
FOXA1-205ENST00000557418 KATNAL1Q9BW62 490 aa24.14■■□□□ 1.45
FOXA1-205ENST00000557418 RNF26Q9BY78 433 aaPredicted RBP24.14■■□□□ 1.45
FOXA1-205ENST00000557418 WNT8AQ9H1J5 351 aa24.14■■□□□ 1.45
FOXA1-205ENST00000557418 V9GY48 417 aaPredicted RBP24.14■■□□□ 1.45
FOXA1-205ENST00000557418 SPATA31C2B4DYI2 1134 aa24.13■■□□□ 1.45
FOXA1-205ENST00000557418 PRPF3O43395 683 aaKnown RBP24.13■■□□□ 1.45
FOXA1-205ENST00000557418 JAK2O60674 1132 aa24.13■■□□□ 1.45
FOXA1-205ENST00000557418 PPFIA3O75145 1194 aa24.13■■□□□ 1.45
FOXA1-205ENST00000557418 UBA1P22314 1058 aaKnown RBP24.13■■□□□ 1.45
FOXA1-205ENST00000557418 ICAM3P32942 547 aa24.13■■□□□ 1.45
FOXA1-205ENST00000557418 PSEN2P49810 448 aa24.13■■□□□ 1.45
FOXA1-205ENST00000557418 PTGISQ16647 500 aa24.13■■□□□ 1.45
FOXA1-205ENST00000557418 HSDL1Q3SXM5 330 aa24.13■■□□□ 1.45
FOXA1-205ENST00000557418 PCNX4Q63HM2 1172 aa24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms