RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 STK36Q9NRP7 1315 aa14.29□□□□□ -0.12
SLIRP-209ENST00000557342 LTBP2Q14767 1821 aa14.29□□□□□ -0.12
SLIRP-209ENST00000557342 DCDC2CA8MYV0 355 aa14.28□□□□□ -0.12
SLIRP-209ENST00000557342 SPATA31C2B4DYI2 1134 aa14.28□□□□□ -0.12
SLIRP-209ENST00000557342 TLR3O15455 904 aaKnown RBP14.28□□□□□ -0.12
SLIRP-209ENST00000557342 MAFGO15525 162 aa14.28□□□□□ -0.12
SLIRP-209ENST00000557342 PPFIA3O75145 1194 aa14.28□□□□□ -0.12
SLIRP-209ENST00000557342 PURAQ00577 322 aaKnown RBP14.28□□□□□ -0.12
SLIRP-209ENST00000557342 TLE2Q04725 743 aa14.28□□□□□ -0.12
SLIRP-209ENST00000557342 ITGA7Q13683 1181 aa14.28□□□□□ -0.12
SLIRP-209ENST00000557342 NEDD9Q14511 834 aa14.28□□□□□ -0.12
SLIRP-209ENST00000557342 DGKDQ16760 1214 aa14.28□□□□□ -0.12
SLIRP-209ENST00000557342 ME3Q16798 604 aa14.28□□□□□ -0.12
SLIRP-209ENST00000557342 CELF3Q5SZQ8 465 aaKnown RBP14.28□□□□□ -0.12
SLIRP-209ENST00000557342 REXO1Q8N1G1 1221 aaKnown RBP14.28□□□□□ -0.12
SLIRP-209ENST00000557342 GIMAP8Q8ND71 665 aaPredicted RBP14.28□□□□□ -0.12
SLIRP-209ENST00000557342 PPTC7Q8NI37 304 aa14.28□□□□□ -0.12
SLIRP-209ENST00000557342 AFG1LQ8WV93 481 aa14.28□□□□□ -0.12
SLIRP-209ENST00000557342 GPRASP2Q96D09 838 aa14.28□□□□□ -0.12
SLIRP-209ENST00000557342 ZFP91Q96JP5 570 aaPredicted RBP14.28□□□□□ -0.12
SLIRP-209ENST00000557342 MLXIPQ9HAP2 919 aa14.28□□□□□ -0.12
SLIRP-209ENST00000557342 VPS54Q9P1Q0 977 aa14.28□□□□□ -0.12
SLIRP-209ENST00000557342 PQBP1O60828 265 aaKnown RBP14.27□□□□□ -0.13
SLIRP-209ENST00000557342 GGPS1O95749 300 aa14.27□□□□□ -0.13
SLIRP-209ENST00000557342 MMP3P08254 477 aa14.27□□□□□ -0.13
SLIRP-209ENST00000557342 CLTBP09497 229 aa14.27□□□□□ -0.13
SLIRP-209ENST00000557342 SYN1P17600 705 aa14.27□□□□□ -0.13
SLIRP-209ENST00000557342 XBP1P17861 261 aa14.27□□□□□ -0.13
SLIRP-209ENST00000557342 UBA1P22314 1058 aaKnown RBP14.27□□□□□ -0.13
SLIRP-209ENST00000557342 SREBF1P36956 1147 aa14.27□□□□□ -0.13
SLIRP-209ENST00000557342 CDK7P50613 346 aa14.27□□□□□ -0.13
SLIRP-209ENST00000557342 NLRP5P59047 1200 aa14.27□□□□□ -0.13
SLIRP-209ENST00000557342 MYSM1Q5VVJ2 828 aa14.27□□□□□ -0.13
SLIRP-209ENST00000557342 JAKMIP3Q5VZ66 844 aa14.27□□□□□ -0.13
SLIRP-209ENST00000557342 GALNT17Q6IS24 598 aa14.27□□□□□ -0.13
SLIRP-209ENST00000557342 SLC43A3Q8NBI5 491 aa14.27□□□□□ -0.13
SLIRP-209ENST00000557342 WASF1Q92558 559 aa14.27□□□□□ -0.13
SLIRP-209ENST00000557342 GTF3C6Q969F1 213 aa14.27□□□□□ -0.13
SLIRP-209ENST00000557342 SENP7Q9BQF6 1050 aa14.27□□□□□ -0.13
SLIRP-209ENST00000557342 JADE2Q9NQC1 790 aa14.27□□□□□ -0.13
SLIRP-209ENST00000557342 TMEM260Q9NX78 707 aa14.27□□□□□ -0.13
SLIRP-209ENST00000557342 LIMCH1Q9UPQ0 1083 aa14.27□□□□□ -0.13
SLIRP-209ENST00000557342 UBIAD1Q9Y5Z9 338 aa14.27□□□□□ -0.13
SLIRP-209ENST00000557342 SP2Q02086 613 aa14.26□□□□□ -0.13
SLIRP-209ENST00000557342 MTMR1Q13613 665 aa14.26□□□□□ -0.13
SLIRP-209ENST00000557342 RABEP1Q15276 862 aa14.26□□□□□ -0.13
SLIRP-209ENST00000557342 METTL7BQ6UX53 244 aa14.26□□□□□ -0.13
SLIRP-209ENST00000557342 PGBD1Q96JS3 809 aa14.26□□□□□ -0.13
SLIRP-209ENST00000557342 ZSCAN31Q96LW9 406 aaPredicted RBP14.26□□□□□ -0.13
SLIRP-209ENST00000557342 SPATA33Q96N06 139 aa14.26□□□□□ -0.13
SLIRP-209ENST00000557342 KIF2CQ99661 725 aa14.26□□□□□ -0.13
SLIRP-209ENST00000557342 LBHD1Q9BQE6 289 aaPredicted RBP14.26□□□□□ -0.13
SLIRP-209ENST00000557342 MXRA8Q9BRK3 442 aa14.26□□□□□ -0.13
SLIRP-209ENST00000557342 KATNAL1Q9BW62 490 aa14.26□□□□□ -0.13
SLIRP-209ENST00000557342 PRDM5Q9NQX1 630 aaPredicted RBP14.26□□□□□ -0.13
SLIRP-209ENST00000557342 PDLIM7Q9NR12 457 aa14.26□□□□□ -0.13
SLIRP-209ENST00000557342 NOP56O00567 594 aaKnown RBP14.25□□□□□ -0.13
SLIRP-209ENST00000557342 PPFIA4O75335 1185 aa14.25□□□□□ -0.13
SLIRP-209ENST00000557342 LARGE1O95461 756 aa14.25□□□□□ -0.13
SLIRP-209ENST00000557342 ITGB5P18084 799 aa14.25□□□□□ -0.13
SLIRP-209ENST00000557342 ZNF76P36508 570 aa14.25□□□□□ -0.13
SLIRP-209ENST00000557342 PSMC6P62333 389 aa14.25□□□□□ -0.13
SLIRP-209ENST00000557342 ARHGAP4P98171 946 aa14.25□□□□□ -0.13
SLIRP-209ENST00000557342 SEMA3FQ13275 785 aa14.25□□□□□ -0.13
SLIRP-209ENST00000557342 NFRKBQ6P4R8 1299 aa14.25□□□□□ -0.13
SLIRP-209ENST00000557342 FAM126BQ8IXS8 530 aa14.25□□□□□ -0.13
SLIRP-209ENST00000557342 NECAB1Q8N987 351 aa14.25□□□□□ -0.13
SLIRP-209ENST00000557342 TMEM39AQ9NV64 488 aa14.25□□□□□ -0.13
SLIRP-209ENST00000557342 ORC3Q9UBD5 711 aaPredicted RBP14.25□□□□□ -0.13
SLIRP-209ENST00000557342 PCDHA4Q9UN74 947 aa14.25□□□□□ -0.13
SLIRP-209ENST00000557342 KAT6AQ92794 2004 aa14.24□□□□□ -0.13
SLIRP-209ENST00000557342 GRIN2DO15399 1336 aa14.24□□□□□ -0.13
SLIRP-209ENST00000557342 KIAA0355O15063 1070 aa14.24□□□□□ -0.13
SLIRP-209ENST00000557342 ST18O60284 1047 aa14.24□□□□□ -0.13
SLIRP-209ENST00000557342 CTDNEP1O95476 244 aa14.24□□□□□ -0.13
SLIRP-209ENST00000557342 CYP3A4P08684 503 aa14.24□□□□□ -0.13
SLIRP-209ENST00000557342 HOXD8P13378 290 aaPredicted RBP14.24□□□□□ -0.13
SLIRP-209ENST00000557342 BMP8BP34820 402 aa14.24□□□□□ -0.13
SLIRP-209ENST00000557342 PTPN11Q06124 597 aaPredicted RBP14.24□□□□□ -0.13
SLIRP-209ENST00000557342 FAAP100Q0VG06 881 aa14.24□□□□□ -0.13
SLIRP-209ENST00000557342 HSDL1Q3SXM5 330 aa14.24□□□□□ -0.13
SLIRP-209ENST00000557342 CEP55Q53EZ4 464 aa14.24□□□□□ -0.13
SLIRP-209ENST00000557342 CHRDL2Q6WN34 429 aa14.24□□□□□ -0.13
SLIRP-209ENST00000557342 CYFIP1Q7L576 1253 aa14.24□□□□□ -0.13
SLIRP-209ENST00000557342 NIPA1Q7RTP0 329 aa14.24□□□□□ -0.13
SLIRP-209ENST00000557342 DAGLBQ8NCG7 672 aa14.24□□□□□ -0.13
SLIRP-209ENST00000557342 SH2B1Q9NRF2 756 aaPredicted RBP14.24□□□□□ -0.13
SLIRP-209ENST00000557342 SORBS3O60504 671 aa14.23□□□□□ -0.13
SLIRP-209ENST00000557342 CD4P01730 458 aa14.23□□□□□ -0.13
SLIRP-209ENST00000557342 SUPT20HL2P0C7V6 817 aa14.23□□□□□ -0.13
SLIRP-209ENST00000557342 RAG1P15918 1043 aa14.23□□□□□ -0.13
SLIRP-209ENST00000557342 KCNA2P16389 499 aa14.23□□□□□ -0.13
SLIRP-209ENST00000557342 MAGEA10P43363 369 aaPredicted RBP14.23□□□□□ -0.13
SLIRP-209ENST00000557342 NBPF20Q3BBV1 942 aa14.23□□□□□ -0.13
SLIRP-209ENST00000557342 FAM47CQ5HY64 1035 aa14.23□□□□□ -0.13
SLIRP-209ENST00000557342 SH3RF1Q7Z6J0 888 aa14.23□□□□□ -0.13
SLIRP-209ENST00000557342 BLIDQ8IZY5 108 aa14.23□□□□□ -0.13
SLIRP-209ENST00000557342 NSUN7Q8NE18 718 aaKnown RBP14.23□□□□□ -0.13
SLIRP-209ENST00000557342 GDF15Q99988 308 aa14.23□□□□□ -0.13
SLIRP-209ENST00000557342 COLQQ9Y215 455 aaPredicted RBP14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms