RNA–Protein interactions for RNA: ENST00000557302.1

SHMT2-228, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-228ENST00000557302 FIBPO43427 364 aa15.52■□□□□ 0.08
SHMT2-228ENST00000557302 TGFB3P10600 412 aa15.52■□□□□ 0.08
SHMT2-228ENST00000557302 ICAM3P32942 547 aa15.52■□□□□ 0.08
SHMT2-228ENST00000557302 ACLYP53396 1101 aa15.52■□□□□ 0.08
SHMT2-228ENST00000557302 DAGLBQ8NCG7 672 aa15.52■□□□□ 0.08
SHMT2-228ENST00000557302 RASGRP4Q8TDF6 673 aa15.52■□□□□ 0.08
SHMT2-228ENST00000557302 GPRASP2Q96D09 838 aa15.52■□□□□ 0.08
SHMT2-228ENST00000557302 KCNJ14Q9UNX9 436 aa15.52■□□□□ 0.08
SHMT2-228ENST00000557302 A0A1W2PQ45 241 aaPredicted RBP15.51■□□□□ 0.07
SHMT2-228ENST00000557302 A0A1W2PQY0 241 aa15.51■□□□□ 0.07
SHMT2-228ENST00000557302 SPATA31C2B4DYI2 1134 aa15.51■□□□□ 0.07
SHMT2-228ENST00000557302 CD2BP2O95400 341 aaKnown RBP15.51■□□□□ 0.07
SHMT2-228ENST00000557302 ASGR1P07306 291 aa15.51■□□□□ 0.07
SHMT2-228ENST00000557302 UBA1P22314 1058 aaKnown RBP15.51■□□□□ 0.07
SHMT2-228ENST00000557302 ARHGAP4P98171 946 aa15.51■□□□□ 0.07
SHMT2-228ENST00000557302 ARHGAP1Q07960 439 aa15.51■□□□□ 0.07
SHMT2-228ENST00000557302 LAMC2Q13753 1193 aa15.51■□□□□ 0.07
SHMT2-228ENST00000557302 DHX37Q8IY37 1157 aaKnown RBP15.51■□□□□ 0.07
SHMT2-228ENST00000557302 BLIDQ8IZY5 108 aa15.51■□□□□ 0.07
SHMT2-228ENST00000557302 DPF3Q92784 378 aa15.51■□□□□ 0.07
SHMT2-228ENST00000557302 CDHR1Q96JP9 859 aa15.51■□□□□ 0.07
SHMT2-228ENST00000557302 PHF20Q9BVI0 1012 aa15.51■□□□□ 0.07
SHMT2-228ENST00000557302 UBIAD1Q9Y5Z9 338 aa15.51■□□□□ 0.07
SHMT2-228ENST00000557302 A6NJR5 290 aa15.5■□□□□ 0.07
SHMT2-228ENST00000557302 GGPS1O95749 300 aa15.5■□□□□ 0.07
SHMT2-228ENST00000557302 ITGB5P18084 799 aa15.5■□□□□ 0.07
SHMT2-228ENST00000557302 ZNF76P36508 570 aa15.5■□□□□ 0.07
SHMT2-228ENST00000557302 ATN1P54259 1190 aaPredicted RBP15.5■□□□□ 0.07
SHMT2-228ENST00000557302 HMGN5P82970 282 aaKnown RBP15.5■□□□□ 0.07
SHMT2-228ENST00000557302 SEMA3FQ13275 785 aa15.5■□□□□ 0.07
SHMT2-228ENST00000557302 TRIM29Q14134 588 aa15.5■□□□□ 0.07
SHMT2-228ENST00000557302 NEDD9Q14511 834 aa15.5■□□□□ 0.07
SHMT2-228ENST00000557302 NPY5RQ15761 445 aa15.5■□□□□ 0.07
SHMT2-228ENST00000557302 CELF3Q5SZQ8 465 aaKnown RBP15.5■□□□□ 0.07
SHMT2-228ENST00000557302 EMID1Q96A84 441 aaPredicted RBP15.5■□□□□ 0.07
SHMT2-228ENST00000557302 TMX3Q96JJ7 454 aa15.5■□□□□ 0.07
SHMT2-228ENST00000557302 GLT1D1Q96MS3 346 aa15.5■□□□□ 0.07
SHMT2-228ENST00000557302 MXRA8Q9BRK3 442 aa15.5■□□□□ 0.07
SHMT2-228ENST00000557302 JADE2Q9NQC1 790 aa15.5■□□□□ 0.07
SHMT2-228ENST00000557302 STARD7Q9NQZ5 370 aa15.5■□□□□ 0.07
SHMT2-228ENST00000557302 GJB4Q9NTQ9 266 aa15.5■□□□□ 0.07
SHMT2-228ENST00000557302 POLR3EQ9NVU0 708 aa15.5■□□□□ 0.07
SHMT2-228ENST00000557302 KIAA1217Q5T5P2 1943 aa15.5■□□□□ 0.07
SHMT2-228ENST00000557302 MAFGO15525 162 aa15.49■□□□□ 0.07
SHMT2-228ENST00000557302 CABYRO75952 493 aa15.49■□□□□ 0.07
SHMT2-228ENST00000557302 CYP3A4P08684 503 aa15.49■□□□□ 0.07
SHMT2-228ENST00000557302 SP2Q02086 613 aa15.49■□□□□ 0.07
SHMT2-228ENST00000557302 MTMR1Q13613 665 aa15.49■□□□□ 0.07
SHMT2-228ENST00000557302 LRRC26Q2I0M4 334 aa15.49■□□□□ 0.07
SHMT2-228ENST00000557302 CEP55Q53EZ4 464 aa15.49■□□□□ 0.07
SHMT2-228ENST00000557302 CXCL17Q6UXB2 119 aa15.49■□□□□ 0.07
SHMT2-228ENST00000557302 AFG1LQ8WV93 481 aa15.49■□□□□ 0.07
SHMT2-228ENST00000557302 CRYGNQ8WXF5 182 aa15.49■□□□□ 0.07
SHMT2-228ENST00000557302 VTI1AQ96AJ9 217 aa15.49■□□□□ 0.07
SHMT2-228ENST00000557302 SPATA33Q96N06 139 aa15.49■□□□□ 0.07
SHMT2-228ENST00000557302 MLXIPQ9HAP2 919 aa15.49■□□□□ 0.07
SHMT2-228ENST00000557302 BRMS1Q9HCU9 246 aa15.49■□□□□ 0.07
SHMT2-228ENST00000557302 ELP1O95163 1332 aa15.48■□□□□ 0.07
SHMT2-228ENST00000557302 M0R2N6 131 aa15.48■□□□□ 0.07
SHMT2-228ENST00000557302 EVI5O60447 810 aa15.48■□□□□ 0.07
SHMT2-228ENST00000557302 SORBS3O60504 671 aa15.48■□□□□ 0.07
SHMT2-228ENST00000557302 KPNA6O60684 536 aa15.48■□□□□ 0.07
SHMT2-228ENST00000557302 MYL3P08590 195 aa15.48■□□□□ 0.07
SHMT2-228ENST00000557302 FOSBP53539 338 aa15.48■□□□□ 0.07
SHMT2-228ENST00000557302 MYSM1Q5VVJ2 828 aa15.48■□□□□ 0.07
SHMT2-228ENST00000557302 SLC39A5Q6ZMH5 540 aa15.48■□□□□ 0.07
SHMT2-228ENST00000557302 KRT25Q7Z3Z0 450 aa15.48■□□□□ 0.07
SHMT2-228ENST00000557302 FAM184AQ8NB25 1140 aa15.48■□□□□ 0.07
SHMT2-228ENST00000557302 GIMAP8Q8ND71 665 aaPredicted RBP15.48■□□□□ 0.07
SHMT2-228ENST00000557302 PPTC7Q8NI37 304 aa15.48■□□□□ 0.07
SHMT2-228ENST00000557302 SENP7Q9BQF6 1050 aa15.48■□□□□ 0.07
SHMT2-228ENST00000557302 DNAH12Q6ZR08 3092 aa15.48■□□□□ 0.07
SHMT2-228ENST00000557302 A0A0U1RQG5 324 aaPredicted RBP15.47■□□□□ 0.07
SHMT2-228ENST00000557302 CCDC194A0A1B0GVG4 234 aa15.47■□□□□ 0.07
SHMT2-228ENST00000557302 MEIS1O00470 390 aa15.47■□□□□ 0.07
SHMT2-228ENST00000557302 MMP3P08254 477 aa15.47■□□□□ 0.07
SHMT2-228ENST00000557302 KRT2P35908 639 aa15.47■□□□□ 0.07
SHMT2-228ENST00000557302 RTP1P59025 263 aa15.47■□□□□ 0.07
SHMT2-228ENST00000557302 PURAQ00577 322 aaKnown RBP15.47■□□□□ 0.07
SHMT2-228ENST00000557302 SNX17Q15036 470 aa15.47■□□□□ 0.07
SHMT2-228ENST00000557302 NONOQ15233 471 aaKnown RBP eCLIP15.47■□□□□ 0.07
SHMT2-228ENST00000557302 C1orf53Q5VUE5 145 aa15.47■□□□□ 0.07
SHMT2-228ENST00000557302 KRT40Q6A162 431 aa15.47■□□□□ 0.07
SHMT2-228ENST00000557302 METTL7BQ6UX53 244 aa15.47■□□□□ 0.07
SHMT2-228ENST00000557302 CYFIP1Q7L576 1253 aa15.47■□□□□ 0.07
SHMT2-228ENST00000557302 NIPA1Q7RTP0 329 aa15.47■□□□□ 0.07
SHMT2-228ENST00000557302 CYP2W1Q8TAV3 490 aa15.47■□□□□ 0.07
SHMT2-228ENST00000557302 MTG1Q9BT17 334 aaPredicted RBP15.47■□□□□ 0.07
SHMT2-228ENST00000557302 KCNH7Q9NS40 1196 aa15.47■□□□□ 0.07
SHMT2-228ENST00000557302 PKD2L1Q9P0L9 805 aa15.47■□□□□ 0.07
SHMT2-228ENST00000557302 ATP11BQ9Y2G3 1177 aa15.47■□□□□ 0.07
SHMT2-228ENST00000557302 KIF3AQ9Y496 699 aa15.47■□□□□ 0.07
SHMT2-228ENST00000557302 NR2E3Q9Y5X4 410 aa15.47■□□□□ 0.07
SHMT2-228ENST00000557302 FAM86B1E9PN63 330 aa15.46■□□□□ 0.07
SHMT2-228ENST00000557302 NOP56O00567 594 aaKnown RBP15.46■□□□□ 0.07
SHMT2-228ENST00000557302 MMP1P03956 469 aa15.46■□□□□ 0.07
SHMT2-228ENST00000557302 FAM86B2P0C5J1 330 aa15.46■□□□□ 0.07
SHMT2-228ENST00000557302 KCNA2P16389 499 aa15.46■□□□□ 0.07
SHMT2-228ENST00000557302 USP11P51784 963 aa15.46■□□□□ 0.07
SHMT2-228ENST00000557302 SETQ01105 290 aaPredicted RBP15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms