RNA–Protein interactions for RNA: ENST00000557005.1

SYNE2-223, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 5,804 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-223ENST00000557005 GMNCA6NCL1 334 aa5.44□□□□□ -1.54
SYNE2-223ENST00000557005 CCDC169A6NNP5 214 aa5.44□□□□□ -1.54
SYNE2-223ENST00000557005 ATP2A1O14983 1001 aa5.44□□□□□ -1.54
SYNE2-223ENST00000557005 PLS3P13797 630 aa5.44□□□□□ -1.54
SYNE2-223ENST00000557005 IFNAR1P17181 557 aa5.44□□□□□ -1.54
SYNE2-223ENST00000557005 SLC1A4P43007 532 aa5.44□□□□□ -1.54
SYNE2-223ENST00000557005 LRRC14Q15048 493 aa5.44□□□□□ -1.54
SYNE2-223ENST00000557005 ZNF365Q70YC5 407 aa5.44□□□□□ -1.54
SYNE2-223ENST00000557005 FNBP4Q8N3X1 1017 aaPredicted RBP5.44□□□□□ -1.54
SYNE2-223ENST00000557005 RETREG2Q8NC44 543 aa5.44□□□□□ -1.54
SYNE2-223ENST00000557005 TTC16Q8NEE8 873 aa5.44□□□□□ -1.54
SYNE2-223ENST00000557005 LZTS2Q9BRK4 669 aa5.44□□□□□ -1.54
SYNE2-223ENST00000557005 NYXQ9GZU5 481 aa5.44□□□□□ -1.54
SYNE2-223ENST00000557005 CNOT10Q9H9A5 744 aaKnown RBP5.44□□□□□ -1.54
SYNE2-223ENST00000557005 RBM12Q9NTZ6 932 aaKnown RBP5.44□□□□□ -1.54
SYNE2-223ENST00000557005 AGPAT5Q9NUQ2 364 aa5.44□□□□□ -1.54
SYNE2-223ENST00000557005 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.44□□□□□ -1.54
SYNE2-223ENST00000557005 ITIH6Q6UXX5 1313 aa5.44□□□□□ -1.54
SYNE2-223ENST00000557005 UFL1O94874 794 aa5.44□□□□□ -1.54
SYNE2-223ENST00000557005 SP4Q02446 784 aa5.44□□□□□ -1.54
SYNE2-223ENST00000557005 MESDQ14696 234 aa5.44□□□□□ -1.54
SYNE2-223ENST00000557005 ANKRD40Q6AI12 368 aa5.44□□□□□ -1.54
SYNE2-223ENST00000557005 EMBQ6PCB8 327 aa5.44□□□□□ -1.54
SYNE2-223ENST00000557005 FAM47EQ6ZV65 393 aa5.44□□□□□ -1.54
SYNE2-223ENST00000557005 ZIM3Q96PE6 472 aa5.44□□□□□ -1.54
SYNE2-223ENST00000557005 SPATS2LQ9NUQ6 558 aaKnown RBP5.44□□□□□ -1.54
SYNE2-223ENST00000557005 GCNT4Q9P109 453 aa5.44□□□□□ -1.54
SYNE2-223ENST00000557005 WDR19Q8NEZ3 1342 aa5.44□□□□□ -1.54
SYNE2-223ENST00000557005 SIGLEC1Q9BZZ2 1709 aa5.44□□□□□ -1.54
SYNE2-223ENST00000557005 PLEKHG2Q9H7P9 1386 aa5.44□□□□□ -1.54
SYNE2-223ENST00000557005 PHF20L1A8MW92 1017 aa5.43□□□□□ -1.54
SYNE2-223ENST00000557005 PDE8BO95263 885 aa5.43□□□□□ -1.54
SYNE2-223ENST00000557005 USP17L8P0C7I0 530 aa5.43□□□□□ -1.54
SYNE2-223ENST00000557005 MDH1P40925 334 aaKnown RBP5.43□□□□□ -1.54
SYNE2-223ENST00000557005 STAT1P42224 750 aa5.43□□□□□ -1.54
SYNE2-223ENST00000557005 PMS2P54278 862 aa5.43□□□□□ -1.54
SYNE2-223ENST00000557005 CUL1Q13616 776 aa5.43□□□□□ -1.54
SYNE2-223ENST00000557005 CLUL1Q15846 466 aa5.43□□□□□ -1.54
SYNE2-223ENST00000557005 EXOC3L4Q17RC7 722 aa5.43□□□□□ -1.54
SYNE2-223ENST00000557005 HIBCHQ6NVY1 386 aaPredicted RBP5.43□□□□□ -1.54
SYNE2-223ENST00000557005 ZNF449Q6P9G9 518 aa5.43□□□□□ -1.54
SYNE2-223ENST00000557005 CCNI2Q6ZMN8 369 aaPredicted RBP5.43□□□□□ -1.54
SYNE2-223ENST00000557005 NOC2LQ9Y3T9 749 aaKnown RBP5.43□□□□□ -1.54
SYNE2-223ENST00000557005 TBX22Q9Y458 520 aa5.43□□□□□ -1.54
SYNE2-223ENST00000557005 HEG1Q9ULI3 1381 aa5.43□□□□□ -1.54
SYNE2-223ENST00000557005 ERVV-2B6SEH9 535 aa5.43□□□□□ -1.54
SYNE2-223ENST00000557005 KLRF2D3W0D1 207 aa5.43□□□□□ -1.54
SYNE2-223ENST00000557005 POC1B-GALNT4F8VUJ3 575 aa5.43□□□□□ -1.54
SYNE2-223ENST00000557005 HARSP12081 509 aaKnown RBP5.43□□□□□ -1.54
SYNE2-223ENST00000557005 ATP2A2P16615 1042 aaKnown RBP5.43□□□□□ -1.54
SYNE2-223ENST00000557005 FGFR4P22455 802 aa5.43□□□□□ -1.54
SYNE2-223ENST00000557005 EZH2Q15910 746 aaKnown RBP5.43□□□□□ -1.54
SYNE2-223ENST00000557005 HLFQ16534 295 aa5.43□□□□□ -1.54
SYNE2-223ENST00000557005 CFAP157Q5JU67 520 aa5.43□□□□□ -1.54
SYNE2-223ENST00000557005 LIN9Q5TKA1 542 aa5.43□□□□□ -1.54
SYNE2-223ENST00000557005 KCTD1Q719H9 257 aa5.43□□□□□ -1.54
SYNE2-223ENST00000557005 HS2ST1Q7LGA3 356 aa5.43□□□□□ -1.54
SYNE2-223ENST00000557005 VPS52Q8N1B4 723 aa5.43□□□□□ -1.54
SYNE2-223ENST00000557005 RAD54LQ92698 747 aa5.43□□□□□ -1.54
SYNE2-223ENST00000557005 COA7Q96BR5 231 aa5.43□□□□□ -1.54
SYNE2-223ENST00000557005 STRBPQ96SI9 672 aaKnown RBP5.43□□□□□ -1.54
SYNE2-223ENST00000557005 VIPAS39Q9H9C1 493 aa5.43□□□□□ -1.54
SYNE2-223ENST00000557005 FBXL5Q9UKA1 691 aa5.43□□□□□ -1.54
SYNE2-223ENST00000557005 GRID2IPA4D2P6 1211 aa5.43□□□□□ -1.54
SYNE2-223ENST00000557005 K7ENM7 598 aa5.43□□□□□ -1.54
SYNE2-223ENST00000557005 PSMD14O00487 310 aa5.43□□□□□ -1.54
SYNE2-223ENST00000557005 EXOC3O60645 756 aa5.43□□□□□ -1.54
SYNE2-223ENST00000557005 FGGP02679 453 aa5.43□□□□□ -1.54
SYNE2-223ENST00000557005 BCRP11274 1271 aa5.43□□□□□ -1.54
SYNE2-223ENST00000557005 TMOD1P28289 359 aa5.43□□□□□ -1.54
SYNE2-223ENST00000557005 PDXDC1Q6P996 788 aa5.43□□□□□ -1.54
SYNE2-223ENST00000557005 CEP128Q6ZU80 1094 aa5.43□□□□□ -1.54
SYNE2-223ENST00000557005 KRT26Q7Z3Y9 468 aa5.43□□□□□ -1.54
SYNE2-223ENST00000557005 CASKIN2Q8WXE0 1202 aa5.43□□□□□ -1.54
SYNE2-223ENST00000557005 NLRP3Q96P20 1036 aa5.43□□□□□ -1.54
SYNE2-223ENST00000557005 OSBPL1AQ9BXW6 950 aa5.43□□□□□ -1.54
SYNE2-223ENST00000557005 SH2D4AQ9H788 454 aa5.43□□□□□ -1.54
SYNE2-223ENST00000557005 MAGEF1Q9HAY2 307 aa5.43□□□□□ -1.54
SYNE2-223ENST00000557005 CCDC87Q9NVE4 849 aa5.43□□□□□ -1.54
SYNE2-223ENST00000557005 BTG4Q9NY30 223 aa5.43□□□□□ -1.54
SYNE2-223ENST00000557005 CEP72Q9P209 647 aa5.43□□□□□ -1.54
SYNE2-223ENST00000557005 PASKQ96RG2 1323 aa5.43□□□□□ -1.54
SYNE2-223ENST00000557005 LRRD1A4D1F6 860 aa5.43□□□□□ -1.54
SYNE2-223ENST00000557005 WDR91A4D1P6 747 aa5.43□□□□□ -1.54
SYNE2-223ENST00000557005 LAD1O00515 517 aa5.43□□□□□ -1.54
SYNE2-223ENST00000557005 SUN1O94901 812 aa5.43□□□□□ -1.54
SYNE2-223ENST00000557005 CCNE1P24864 410 aa5.43□□□□□ -1.54
SYNE2-223ENST00000557005 SLC16A2P36021 539 aa5.43□□□□□ -1.54
SYNE2-223ENST00000557005 BTDP43251 543 aa5.43□□□□□ -1.54
SYNE2-223ENST00000557005 ZNF211Q13398 564 aaPredicted RBP5.43□□□□□ -1.54
SYNE2-223ENST00000557005 COL9A3Q14050 684 aaPredicted RBP5.43□□□□□ -1.54
SYNE2-223ENST00000557005 ERFEQ4G0M1 354 aa5.43□□□□□ -1.54
SYNE2-223ENST00000557005 CCDC38Q502W7 563 aa5.43□□□□□ -1.54
SYNE2-223ENST00000557005 FAM102BQ5T8I3 360 aa5.43□□□□□ -1.54
SYNE2-223ENST00000557005 TRAPPC11Q7Z392 1133 aa5.43□□□□□ -1.54
SYNE2-223ENST00000557005 GRK7Q8WTQ7 553 aa5.43□□□□□ -1.54
SYNE2-223ENST00000557005 CASZ1Q86V15 1759 aa5.43□□□□□ -1.54
SYNE2-223ENST00000557005 HIP1RO75146 1068 aa5.43□□□□□ -1.54
SYNE2-223ENST00000557005 LRRN2O75325 713 aa5.43□□□□□ -1.54
SYNE2-223ENST00000557005 ACSL3O95573 720 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms