RNA–Protein interactions for RNA: ENST00000556938.1

SLC38A6-220, Transcript of solute carrier family 38 member 6, humanhuman

TSL 4

Gene SLC38A6, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A6-220ENST00000556938 CDIP1Q9H305 208 aa6.25□□□□□ -1.41
SLC38A6-220ENST00000556938 PPARGC1AQ9UBK2 798 aaKnown RBP6.25□□□□□ -1.41
SLC38A6-220ENST00000556938 SH3D21A4FU49 640 aa6.24□□□□□ -1.41
SLC38A6-220ENST00000556938 CYP2C8P10632 490 aa6.24□□□□□ -1.41
SLC38A6-220ENST00000556938 PABPC1P11940 636 aaKnown RBP6.24□□□□□ -1.41
SLC38A6-220ENST00000556938 INSRRP14616 1297 aa6.24□□□□□ -1.41
SLC38A6-220ENST00000556938 ATP2B1P20020 1258 aa6.24□□□□□ -1.41
SLC38A6-220ENST00000556938 STAT5AP42229 794 aa6.24□□□□□ -1.41
SLC38A6-220ENST00000556938 KCNC1P48547 511 aa6.24□□□□□ -1.41
SLC38A6-220ENST00000556938 EFEMP1Q12805 493 aa6.24□□□□□ -1.41
SLC38A6-220ENST00000556938 NTRK3Q16288 839 aa6.24□□□□□ -1.41
SLC38A6-220ENST00000556938 KCNT2Q6UVM3 1135 aa6.24□□□□□ -1.41
SLC38A6-220ENST00000556938 SPATC1Q76KD6 591 aa6.24□□□□□ -1.41
SLC38A6-220ENST00000556938 STK32CQ86UX6 486 aa6.24□□□□□ -1.41
SLC38A6-220ENST00000556938 ZBTB8AQ96BR9 441 aa6.24□□□□□ -1.41
SLC38A6-220ENST00000556938 GPR27Q9NS67 375 aa6.24□□□□□ -1.41
SLC38A6-220ENST00000556938 PPP1R1BQ9UD71 204 aaPredicted RBP6.24□□□□□ -1.41
SLC38A6-220ENST00000556938 MSRB2Q9Y3D2 182 aa6.24□□□□□ -1.41
SLC38A6-220ENST00000556938 BLACEA4D250 179 aa6.23□□□□□ -1.41
SLC38A6-220ENST00000556938 HGSO14964 777 aaPredicted RBP6.23□□□□□ -1.41
SLC38A6-220ENST00000556938 TADA3O75528 432 aa6.23□□□□□ -1.41
SLC38A6-220ENST00000556938 FGFR1P11362 822 aa6.23□□□□□ -1.41
SLC38A6-220ENST00000556938 ERICH6BQ5W0A0 696 aa6.23□□□□□ -1.41
SLC38A6-220ENST00000556938 NSMFQ6X4W1 530 aa6.23□□□□□ -1.41
SLC38A6-220ENST00000556938 FAM126BQ8IXS8 530 aa6.23□□□□□ -1.41
SLC38A6-220ENST00000556938 LINC00482Q8N8I6 264 aa6.23□□□□□ -1.41
SLC38A6-220ENST00000556938 ARRDC4Q8NCT1 418 aa6.23□□□□□ -1.41
SLC38A6-220ENST00000556938 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.23□□□□□ -1.41
SLC38A6-220ENST00000556938 JAM3Q9BX67 310 aa6.23□□□□□ -1.41
SLC38A6-220ENST00000556938 ZNF652Q9Y2D9 606 aa6.23□□□□□ -1.41
SLC38A6-220ENST00000556938 TRAV20A0A0B4J274 112 aa6.22□□□□□ -1.41
SLC38A6-220ENST00000556938 TCRBV5S2A0A599 114 aa6.22□□□□□ -1.41
SLC38A6-220ENST00000556938 CCDC85CA6NKD9 419 aa6.22□□□□□ -1.41
SLC38A6-220ENST00000556938 U2SURPO15042 1029 aaKnown RBP6.22□□□□□ -1.41
SLC38A6-220ENST00000556938 PDPK1O15530 556 aa6.22□□□□□ -1.41
SLC38A6-220ENST00000556938 GTF2F1P35269 517 aaKnown RBP eCLIP6.22□□□□□ -1.41
SLC38A6-220ENST00000556938 PUM1Q14671 1186 aaKnown RBP eCLIP6.22□□□□□ -1.41
SLC38A6-220ENST00000556938 CR1LQ2VPA4 569 aa6.22□□□□□ -1.41
SLC38A6-220ENST00000556938 SPATS1Q496A3 300 aa6.22□□□□□ -1.41
SLC38A6-220ENST00000556938 STEAP3Q658P3 488 aa6.22□□□□□ -1.41
SLC38A6-220ENST00000556938 CARFQ8N187 725 aa6.22□□□□□ -1.41
SLC38A6-220ENST00000556938 LRRC47Q8N1G4 583 aaKnown RBP6.22□□□□□ -1.41
SLC38A6-220ENST00000556938 TEPSINQ96N21 525 aa6.22□□□□□ -1.41
SLC38A6-220ENST00000556938 C8orf37Q96NL8 207 aa6.22□□□□□ -1.41
SLC38A6-220ENST00000556938 C11orf84Q9BUA3 381 aaPredicted RBP6.22□□□□□ -1.41
SLC38A6-220ENST00000556938 SPATA9Q9BWV2 254 aa6.22□□□□□ -1.41
SLC38A6-220ENST00000556938 EPB41L1Q9H4G0 881 aa6.22□□□□□ -1.41
SLC38A6-220ENST00000556938 DGKIO75912 1065 aa6.21□□□□□ -1.42
SLC38A6-220ENST00000556938 SARSP49591 514 aaKnown RBP6.21□□□□□ -1.42
SLC38A6-220ENST00000556938 CHRNA2Q15822 529 aa6.21□□□□□ -1.42
SLC38A6-220ENST00000556938 EMC4Q5J8M3 183 aa6.21□□□□□ -1.42
SLC38A6-220ENST00000556938 NT5DC1Q5TFE4 455 aa6.21□□□□□ -1.42
SLC38A6-220ENST00000556938 RSPO2Q6UXX9 243 aaPredicted RBP6.21□□□□□ -1.42
SLC38A6-220ENST00000556938 ZC3H18Q86VM9 953 aaKnown RBP6.21□□□□□ -1.42
SLC38A6-220ENST00000556938 DCAF4Q8WV16 495 aa6.21□□□□□ -1.42
SLC38A6-220ENST00000556938 PFDN2Q9UHV9 154 aa6.21□□□□□ -1.42
SLC38A6-220ENST00000556938 PCDHB4Q9Y5E5 795 aa6.21□□□□□ -1.42
SLC38A6-220ENST00000556938 THBS2P35442 1172 aa6.2□□□□□ -1.42
SLC38A6-220ENST00000556938 ITGA1P56199 1179 aa6.2□□□□□ -1.42
SLC38A6-220ENST00000556938 IFRD2Q12894 506 aaPredicted RBP6.2□□□□□ -1.42
SLC38A6-220ENST00000556938 RASGRF1Q13972 1273 aa6.2□□□□□ -1.42
SLC38A6-220ENST00000556938 LBX2Q6XYB7 198 aa6.2□□□□□ -1.42
SLC38A6-220ENST00000556938 TTLL7Q6ZT98 887 aa6.2□□□□□ -1.42
SLC38A6-220ENST00000556938 KYQ8NBH2 561 aa6.2□□□□□ -1.42
SLC38A6-220ENST00000556938 PIP4K2CQ8TBX8 421 aa6.2□□□□□ -1.42
SLC38A6-220ENST00000556938 ZNF669Q96BR6 464 aaPredicted RBP6.2□□□□□ -1.42
SLC38A6-220ENST00000556938 YIPF4Q9BSR8 244 aa6.2□□□□□ -1.42
SLC38A6-220ENST00000556938 BDH2Q9BUT1 245 aa6.2□□□□□ -1.42
SLC38A6-220ENST00000556938 CCDC113Q9H0I3 377 aa6.2□□□□□ -1.42
SLC38A6-220ENST00000556938 NTMQ9P121 344 aa6.2□□□□□ -1.42
SLC38A6-220ENST00000556938 ASXL2Q76L83 1435 aa6.19□□□□□ -1.42
SLC38A6-220ENST00000556938 SMARCA5O60264 1052 aaPredicted RBP6.19□□□□□ -1.42
SLC38A6-220ENST00000556938 ADCY3O60266 1144 aa6.19□□□□□ -1.42
SLC38A6-220ENST00000556938 DIAPH1O60610 1272 aaKnown RBP6.19□□□□□ -1.42
SLC38A6-220ENST00000556938 NKX3-2P78367 333 aa6.19□□□□□ -1.42
SLC38A6-220ENST00000556938 PLP2Q04941 152 aa6.19□□□□□ -1.42
SLC38A6-220ENST00000556938 MTERF2Q49AM1 385 aa6.19□□□□□ -1.42
SLC38A6-220ENST00000556938 NBPF6Q5VWK0 638 aa6.19□□□□□ -1.42
SLC38A6-220ENST00000556938 FOXB2Q5VYV0 432 aa6.19□□□□□ -1.42
SLC38A6-220ENST00000556938 FRMD5Q7Z6J6 570 aa6.19□□□□□ -1.42
SLC38A6-220ENST00000556938 NBPF4Q96M43 638 aa6.19□□□□□ -1.42
SLC38A6-220ENST00000556938 SMOC1Q9H4F8 434 aa6.19□□□□□ -1.42
SLC38A6-220ENST00000556938 PCDH18Q9HCL0 1135 aa6.19□□□□□ -1.42
SLC38A6-220ENST00000556938 MYOTQ9UBF9 498 aa6.19□□□□□ -1.42
SLC38A6-220ENST00000556938 PRICKLE3O43900 615 aaPredicted RBP6.18□□□□□ -1.42
SLC38A6-220ENST00000556938 NOBOXO60393 691 aa6.18□□□□□ -1.42
SLC38A6-220ENST00000556938 LRG1P02750 347 aa6.18□□□□□ -1.42
SLC38A6-220ENST00000556938 COL6A2P12110 1019 aa6.18□□□□□ -1.42
SLC38A6-220ENST00000556938 GPR85P60893 370 aa6.18□□□□□ -1.42
SLC38A6-220ENST00000556938 SSRP1Q08945 709 aaKnown RBP6.18□□□□□ -1.42
SLC38A6-220ENST00000556938 STYK1Q6J9G0 422 aa6.18□□□□□ -1.42
SLC38A6-220ENST00000556938 ZNF761Q86XN6 746 aaPredicted RBP6.18□□□□□ -1.42
SLC38A6-220ENST00000556938 RBM12BQ8IXT5 1001 aaKnown RBP6.18□□□□□ -1.42
SLC38A6-220ENST00000556938 TOE1Q96GM8 510 aaKnown RBP6.18□□□□□ -1.42
SLC38A6-220ENST00000556938 KCNJ15Q99712 375 aa6.18□□□□□ -1.42
SLC38A6-220ENST00000556938 SLC6A20Q9NP91 592 aa6.18□□□□□ -1.42
SLC38A6-220ENST00000556938 USP40Q9NVE5 1235 aa6.18□□□□□ -1.42
SLC38A6-220ENST00000556938 DTLQ9NZJ0 730 aa6.18□□□□□ -1.42
SLC38A6-220ENST00000556938 SIRPGQ9P1W8 387 aa6.18□□□□□ -1.42
SLC38A6-220ENST00000556938 SLC27A2O14975 620 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms