RNA–Protein interactions for RNA: ENST00000556898.5

ATXN3-244, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 990 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-244ENST00000556898 CAP1Q01518 475 aa6.21□□□□□ -1.42
ATXN3-244ENST00000556898 SEPT2Q15019 361 aa6.21□□□□□ -1.42
ATXN3-244ENST00000556898 SEC23AQ15436 765 aa6.21□□□□□ -1.42
ATXN3-244ENST00000556898 FOXD4L6Q3SYB3 417 aaPredicted RBP6.21□□□□□ -1.42
ATXN3-244ENST00000556898 CERKLQ49MI3 558 aaPredicted RBP6.21□□□□□ -1.42
ATXN3-244ENST00000556898 TMEM67Q5HYA8 995 aa6.21□□□□□ -1.42
ATXN3-244ENST00000556898 ZNF468Q5VIY5 522 aaPredicted RBP6.21□□□□□ -1.42
ATXN3-244ENST00000556898 RCSD1Q6JBY9 416 aa6.21□□□□□ -1.42
ATXN3-244ENST00000556898 FOXD4L3Q6VB84 417 aaPredicted RBP6.21□□□□□ -1.42
ATXN3-244ENST00000556898 METTL16Q86W50 562 aaKnown RBP6.21□□□□□ -1.42
ATXN3-244ENST00000556898 FOXP4Q8IVH2 680 aaPredicted RBP6.21□□□□□ -1.42
ATXN3-244ENST00000556898 CCDC144CPQ8IYA2 1237 aa6.21□□□□□ -1.42
ATXN3-244ENST00000556898 ENAHQ8N8S7 591 aaPredicted RBP6.21□□□□□ -1.42
ATXN3-244ENST00000556898 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.21□□□□□ -1.42
ATXN3-244ENST00000556898 ESR2Q92731 530 aa6.21□□□□□ -1.42
ATXN3-244ENST00000556898 SNX21Q969T3 373 aa6.21□□□□□ -1.42
ATXN3-244ENST00000556898 MDFIQ99750 246 aa6.21□□□□□ -1.42
ATXN3-244ENST00000556898 DHX36Q9H2U1 1008 aaKnown RBP6.21□□□□□ -1.42
ATXN3-244ENST00000556898 LY9Q9HBG7 655 aa6.21□□□□□ -1.42
ATXN3-244ENST00000556898 AVENQ9NQS1 362 aaPredicted RBP6.21□□□□□ -1.42
ATXN3-244ENST00000556898 ZDHHC3Q9NYG2 299 aa6.21□□□□□ -1.42
ATXN3-244ENST00000556898 NAP1L2Q9ULW6 460 aaPredicted RBP6.21□□□□□ -1.42
ATXN3-244ENST00000556898 MTMR7Q9Y216 660 aa6.21□□□□□ -1.42
ATXN3-244ENST00000556898 NR2E3Q9Y5X4 410 aa6.21□□□□□ -1.42
ATXN3-244ENST00000556898 COL2A1P02458 1487 aaPredicted RBP6.21□□□□□ -1.42
ATXN3-244ENST00000556898 KRTAP9-6A0A140TA67 174 aa6.2□□□□□ -1.42
ATXN3-244ENST00000556898 A0A1W2PPC1 479 aa6.2□□□□□ -1.42
ATXN3-244ENST00000556898 BACH1O14867 736 aa6.2□□□□□ -1.42
ATXN3-244ENST00000556898 EFSO43281 561 aa6.2□□□□□ -1.42
ATXN3-244ENST00000556898 GH2P01242 217 aa6.2□□□□□ -1.42
ATXN3-244ENST00000556898 FAM157BP0CG42 384 aa6.2□□□□□ -1.42
ATXN3-244ENST00000556898 GTF2A2P52657 109 aa6.2□□□□□ -1.42
ATXN3-244ENST00000556898 SEC13P55735 322 aa6.2□□□□□ -1.42
ATXN3-244ENST00000556898 FGD1P98174 961 aa6.2□□□□□ -1.42
ATXN3-244ENST00000556898 ATP2B2Q01814 1243 aa6.2□□□□□ -1.42
ATXN3-244ENST00000556898 DPYDQ12882 1025 aa6.2□□□□□ -1.42
ATXN3-244ENST00000556898 KIF22Q14807 665 aa6.2□□□□□ -1.42
ATXN3-244ENST00000556898 WTAPQ15007 396 aa6.2□□□□□ -1.42
ATXN3-244ENST00000556898 TAF1CQ15572 869 aaPredicted RBP6.2□□□□□ -1.42
ATXN3-244ENST00000556898 ABCB5Q2M3G0 1257 aa6.2□□□□□ -1.42
ATXN3-244ENST00000556898 SIAH1Q8IUQ4 282 aa6.2□□□□□ -1.42
ATXN3-244ENST00000556898 CCDC83Q8IWF9 413 aa6.2□□□□□ -1.42
ATXN3-244ENST00000556898 HSCBQ8IWL3 235 aa6.2□□□□□ -1.42
ATXN3-244ENST00000556898 CMTR1Q8N1G2 835 aaKnown RBP6.2□□□□□ -1.42
ATXN3-244ENST00000556898 LRRC47Q8N1G4 583 aaKnown RBP6.2□□□□□ -1.42
ATXN3-244ENST00000556898 ACER1Q8TDN7 264 aa6.2□□□□□ -1.42
ATXN3-244ENST00000556898 ZDHHC1Q8WTX9 485 aa6.2□□□□□ -1.42
ATXN3-244ENST00000556898 ZKSCAN4Q969J2 545 aaPredicted RBP6.2□□□□□ -1.42
ATXN3-244ENST00000556898 CEP95Q96GE4 821 aa6.2□□□□□ -1.42
ATXN3-244ENST00000556898 TMX3Q96JJ7 454 aa6.2□□□□□ -1.42
ATXN3-244ENST00000556898 TMEM47Q9BQJ4 181 aa6.2□□□□□ -1.42
ATXN3-244ENST00000556898 HTATIP2Q9BUP3 242 aa6.2□□□□□ -1.42
ATXN3-244ENST00000556898 ALDH8A1Q9H2A2 487 aaPredicted RBP6.2□□□□□ -1.42
ATXN3-244ENST00000556898 PRO3102Q9H379 93 aa6.2□□□□□ -1.42
ATXN3-244ENST00000556898 CNNM2Q9H8M5 875 aa6.2□□□□□ -1.42
ATXN3-244ENST00000556898 NCOA5Q9HCD5 579 aaKnown RBP6.2□□□□□ -1.42
ATXN3-244ENST00000556898 SWAP70Q9UH65 585 aa6.2□□□□□ -1.42
ATXN3-244ENST00000556898 NOVA2Q9UNW9 492 aaKnown RBP6.2□□□□□ -1.42
ATXN3-244ENST00000556898 CCL15-CCL14A0A0B4J2E2 113 aa6.19□□□□□ -1.42
ATXN3-244ENST00000556898 A0A1W2PRG0 241 aa6.19□□□□□ -1.42
ATXN3-244ENST00000556898 HMGB1P09429 215 aaKnown RBP6.19□□□□□ -1.42
ATXN3-244ENST00000556898 EEF2P13639 858 aaKnown RBP6.19□□□□□ -1.42
ATXN3-244ENST00000556898 PDIA3P30101 505 aaKnown RBP6.19□□□□□ -1.42
ATXN3-244ENST00000556898 CDC27P30260 824 aa6.19□□□□□ -1.42
ATXN3-244ENST00000556898 GATA4P43694 442 aa6.19□□□□□ -1.42
ATXN3-244ENST00000556898 SCRN1Q12765 414 aa6.19□□□□□ -1.42
ATXN3-244ENST00000556898 TNFAIP1Q13829 316 aa6.19□□□□□ -1.42
ATXN3-244ENST00000556898 RAB3GAP1Q15042 981 aa6.19□□□□□ -1.42
ATXN3-244ENST00000556898 CCL15Q16663 113 aa6.19□□□□□ -1.42
ATXN3-244ENST00000556898 RSPO4Q2I0M5 234 aaPredicted RBP6.19□□□□□ -1.42
ATXN3-244ENST00000556898 KIAA1755Q5JYT7 1200 aa6.19□□□□□ -1.42
ATXN3-244ENST00000556898 NFXL1Q6ZNB6 911 aa6.19□□□□□ -1.42
ATXN3-244ENST00000556898 SH3TC2Q8TF17 1288 aa6.19□□□□□ -1.42
ATXN3-244ENST00000556898 NUP133Q8WUM0 1156 aa6.19□□□□□ -1.42
ATXN3-244ENST00000556898 BRI3BPQ8WY22 251 aa6.19□□□□□ -1.42
ATXN3-244ENST00000556898 OPTNQ96CV9 577 aa6.19□□□□□ -1.42
ATXN3-244ENST00000556898 TMEM87BQ96K49 555 aa6.19□□□□□ -1.42
ATXN3-244ENST00000556898 ARID3AQ99856 593 aa6.19□□□□□ -1.42
ATXN3-244ENST00000556898 UBAC1Q9BSL1 405 aa6.19□□□□□ -1.42
ATXN3-244ENST00000556898 ZNF341Q9BYN7 854 aa6.19□□□□□ -1.42
ATXN3-244ENST00000556898 AGXT2Q9BYV1 514 aa6.19□□□□□ -1.42
ATXN3-244ENST00000556898 CPVLQ9H3G5 476 aa6.19□□□□□ -1.42
ATXN3-244ENST00000556898 ELP3Q9H9T3 547 aa6.19□□□□□ -1.42
ATXN3-244ENST00000556898 MARK1Q9P0L2 795 aa6.19□□□□□ -1.42
ATXN3-244ENST00000556898 SCHIP1Q9P0W5 487 aaPredicted RBP6.19□□□□□ -1.42
ATXN3-244ENST00000556898 CLIP2Q9UDT6 1046 aa6.19□□□□□ -1.42
ATXN3-244ENST00000556898 HERC5Q9UII4 1024 aaKnown RBP6.19□□□□□ -1.42
ATXN3-244ENST00000556898 ZBTB21Q9ULJ3 1066 aa6.19□□□□□ -1.42
ATXN3-244ENST00000556898 PRR12Q9ULL5 1215 aa6.19□□□□□ -1.42
ATXN3-244ENST00000556898 STX8Q9UNK0 236 aa6.19□□□□□ -1.42
ATXN3-244ENST00000556898 LIMCH1Q9UPQ0 1083 aa6.19□□□□□ -1.42
ATXN3-244ENST00000556898 WDR19Q8NEZ3 1342 aa6.19□□□□□ -1.42
ATXN3-244ENST00000556898 ERICH2A1L162 156 aa6.18□□□□□ -1.42
ATXN3-244ENST00000556898 CCDC69A6NI79 296 aa6.18□□□□□ -1.42
ATXN3-244ENST00000556898 GOLGA8AA7E2F4 631 aa6.18□□□□□ -1.42
ATXN3-244ENST00000556898 SFI1A8K8P3 1242 aa6.18□□□□□ -1.42
ATXN3-244ENST00000556898 GOLGA8BA8MQT2 603 aa6.18□□□□□ -1.42
ATXN3-244ENST00000556898 TLR2O60603 784 aa6.18□□□□□ -1.42
ATXN3-244ENST00000556898 JAK2O60674 1132 aa6.18□□□□□ -1.42
ATXN3-244ENST00000556898 PFKFB2O60825 505 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms