RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 DHX37Q8IY37 1157 aaKnown RBP26.18■■□□□ 1.78
TDP1-216ENST00000556867 PPTC7Q8NI37 304 aa26.18■■□□□ 1.78
TDP1-216ENST00000556867 MTG1Q9BT17 334 aaPredicted RBP26.18■■□□□ 1.78
TDP1-216ENST00000556867 ANO3Q9BYT9 981 aa26.18■■□□□ 1.78
TDP1-216ENST00000556867 C22orf23Q9BZE7 217 aa26.18■■□□□ 1.78
TDP1-216ENST00000556867 PRO3102Q9H379 93 aa26.18■■□□□ 1.78
TDP1-216ENST00000556867 C6orf50Q9HD87 102 aa26.18■■□□□ 1.78
TDP1-216ENST00000556867 SH3GLB2Q9NR46 395 aa26.18■■□□□ 1.78
TDP1-216ENST00000556867 PRKAG2Q9UGJ0 569 aa26.18■■□□□ 1.78
TDP1-216ENST00000556867 GRIN2DO15399 1336 aa26.17■■□□□ 1.78
TDP1-216ENST00000556867 DEXIO95424 95 aa26.17■■□□□ 1.78
TDP1-216ENST00000556867 GGPS1O95749 300 aa26.17■■□□□ 1.78
TDP1-216ENST00000556867 CLTBP09497 229 aa26.17■■□□□ 1.78
TDP1-216ENST00000556867 RBM25P49756 843 aaKnown RBP26.17■■□□□ 1.78
TDP1-216ENST00000556867 SP2Q02086 613 aa26.17■■□□□ 1.78
TDP1-216ENST00000556867 MYSM1Q5VVJ2 828 aa26.17■■□□□ 1.78
TDP1-216ENST00000556867 NLRX1Q86UT6 975 aa26.17■■□□□ 1.78
TDP1-216ENST00000556867 KIF2CQ99661 725 aa26.17■■□□□ 1.78
TDP1-216ENST00000556867 GDF15Q99988 308 aa26.17■■□□□ 1.78
TDP1-216ENST00000556867 DCDC2CA8MYV0 355 aa26.16■■□□□ 1.78
TDP1-216ENST00000556867 GNA11P29992 359 aa26.16■■□□□ 1.78
TDP1-216ENST00000556867 PSMC6P62333 389 aa26.16■■□□□ 1.78
TDP1-216ENST00000556867 MCTP2Q6DN12 878 aa26.16■■□□□ 1.78
TDP1-216ENST00000556867 GPRASP2Q96D09 838 aa26.16■■□□□ 1.78
TDP1-216ENST00000556867 TMEM260Q9NX78 707 aa26.16■■□□□ 1.78
TDP1-216ENST00000556867 VPS54Q9P1Q0 977 aa26.16■■□□□ 1.78
TDP1-216ENST00000556867 COLQQ9Y215 455 aaPredicted RBP26.16■■□□□ 1.78
TDP1-216ENST00000556867 UBIAD1Q9Y5Z9 338 aa26.16■■□□□ 1.78
TDP1-216ENST00000556867 TRIOBPQ9H2D6 2365 aa26.15■■□□□ 1.78
TDP1-216ENST00000556867 DOCK5Q9H7D0 1870 aa26.15■■□□□ 1.78
TDP1-216ENST00000556867 HOXD8P13378 290 aaPredicted RBP26.15■■□□□ 1.78
TDP1-216ENST00000556867 ITGB5P18084 799 aa26.15■■□□□ 1.78
TDP1-216ENST00000556867 SREBF1P36956 1147 aa26.15■■□□□ 1.78
TDP1-216ENST00000556867 MAGEA10P43363 369 aaPredicted RBP26.15■■□□□ 1.78
TDP1-216ENST00000556867 FAAP100Q0VG06 881 aa26.15■■□□□ 1.78
TDP1-216ENST00000556867 ME3Q16798 604 aa26.15■■□□□ 1.78
TDP1-216ENST00000556867 SH3RF1Q7Z6J0 888 aa26.15■■□□□ 1.78
TDP1-216ENST00000556867 FAM126BQ8IXS8 530 aa26.15■■□□□ 1.78
TDP1-216ENST00000556867 FAM177A1Q8N128 213 aaPredicted RBP26.15■■□□□ 1.78
TDP1-216ENST00000556867 REXO1Q8N1G1 1221 aaKnown RBP26.15■■□□□ 1.78
TDP1-216ENST00000556867 CDHR1Q96JP9 859 aa26.15■■□□□ 1.78
TDP1-216ENST00000556867 PGBD1Q96JS3 809 aa26.15■■□□□ 1.78
TDP1-216ENST00000556867 PRDM5Q9NQX1 630 aaPredicted RBP26.15■■□□□ 1.78
TDP1-216ENST00000556867 RANBP2P49792 3224 aaKnown RBP26.15■■□□□ 1.78
TDP1-216ENST00000556867 STK36Q9NRP7 1315 aa26.14■■□□□ 1.78
TDP1-216ENST00000556867 TRIM43BA6NCK2 446 aa26.14■■□□□ 1.78
TDP1-216ENST00000556867 KIAA0355O15063 1070 aa26.14■■□□□ 1.78
TDP1-216ENST00000556867 LARGE1O95461 756 aa26.14■■□□□ 1.78
TDP1-216ENST00000556867 NEDD9Q14511 834 aa26.14■■□□□ 1.78
TDP1-216ENST00000556867 DGKDQ16760 1214 aa26.14■■□□□ 1.78
TDP1-216ENST00000556867 BICD2Q8TD16 824 aa26.14■■□□□ 1.78
TDP1-216ENST00000556867 GTF3C6Q969F1 213 aa26.14■■□□□ 1.78
TDP1-216ENST00000556867 TRIM43Q96BQ3 446 aaPredicted RBP26.14■■□□□ 1.78
TDP1-216ENST00000556867 SPATA33Q96N06 139 aa26.14■■□□□ 1.78
TDP1-216ENST00000556867 SENP7Q9BQF6 1050 aa26.14■■□□□ 1.78
TDP1-216ENST00000556867 ADAMTS3O15072 1205 aa26.13■■□□□ 1.77
TDP1-216ENST00000556867 TLR3O15455 904 aaKnown RBP26.13■■□□□ 1.77
TDP1-216ENST00000556867 HSDL1Q3SXM5 330 aa26.13■■□□□ 1.77
TDP1-216ENST00000556867 JAKMIP3Q5VZ66 844 aa26.13■■□□□ 1.77
TDP1-216ENST00000556867 MLXIPQ9HAP2 919 aa26.13■■□□□ 1.77
TDP1-216ENST00000556867 JADE2Q9NQC1 790 aa26.13■■□□□ 1.77
TDP1-216ENST00000556867 CTDNEP1O95476 244 aa26.12■■□□□ 1.77
TDP1-216ENST00000556867 CD4P01730 458 aa26.12■■□□□ 1.77
TDP1-216ENST00000556867 BMP8BP34820 402 aa26.12■■□□□ 1.77
TDP1-216ENST00000556867 METTL7BQ6UX53 244 aa26.12■■□□□ 1.77
TDP1-216ENST00000556867 UPF2Q9HAU5 1272 aaKnown RBP26.12■■□□□ 1.77
TDP1-216ENST00000556867 TMEM39AQ9NV64 488 aa26.12■■□□□ 1.77
TDP1-216ENST00000556867 PCDH10Q9P2E7 1040 aa26.12■■□□□ 1.77
TDP1-216ENST00000556867 TBX21Q9UL17 535 aa26.12■■□□□ 1.77
TDP1-216ENST00000556867 GTF3C3Q9Y5Q9 886 aa26.12■■□□□ 1.77
TDP1-216ENST00000556867 MAFGO15525 162 aa26.11■■□□□ 1.77
TDP1-216ENST00000556867 SORBS3O60504 671 aa26.11■■□□□ 1.77
TDP1-216ENST00000556867 PPFIA4O75335 1185 aa26.11■■□□□ 1.77
TDP1-216ENST00000556867 ARHGAP4P98171 946 aa26.11■■□□□ 1.77
TDP1-216ENST00000556867 MTMR1Q13613 665 aa26.11■■□□□ 1.77
TDP1-216ENST00000556867 NECAB1Q8N987 351 aa26.11■■□□□ 1.77
TDP1-216ENST00000556867 GIMAP8Q8ND71 665 aaPredicted RBP26.11■■□□□ 1.77
TDP1-216ENST00000556867 CRYGNQ8WXF5 182 aa26.11■■□□□ 1.77
TDP1-216ENST00000556867 LBHD1Q9BQE6 289 aaPredicted RBP26.11■■□□□ 1.77
TDP1-216ENST00000556867 MXRA8Q9BRK3 442 aa26.11■■□□□ 1.77
TDP1-216ENST00000556867 BCAS3Q9H6U6 928 aa26.11■■□□□ 1.77
TDP1-216ENST00000556867 KCNA2P16389 499 aa26.1■■□□□ 1.77
TDP1-216ENST00000556867 NLRP5P59047 1200 aa26.1■■□□□ 1.77
TDP1-216ENST00000556867 MDM2Q00987 491 aaPredicted RBP26.1■■□□□ 1.77
TDP1-216ENST00000556867 NBPF20Q3BBV1 942 aa26.1■■□□□ 1.77
TDP1-216ENST00000556867 NFRKBQ6P4R8 1299 aa26.1■■□□□ 1.77
TDP1-216ENST00000556867 CYFIP1Q7L576 1253 aa26.1■■□□□ 1.77
TDP1-216ENST00000556867 KAT2BQ92831 832 aa26.1■■□□□ 1.77
TDP1-216ENST00000556867 AIFM3Q96NN9 605 aa26.1■■□□□ 1.77
TDP1-216ENST00000556867 F2P00734 622 aa26.09■■□□□ 1.77
TDP1-216ENST00000556867 CEP55Q53EZ4 464 aa26.09■■□□□ 1.77
TDP1-216ENST00000556867 RASGRP4Q8TDF6 673 aa26.09■■□□□ 1.77
TDP1-216ENST00000556867 PCDHA4Q9UN74 947 aa26.09■■□□□ 1.77
TDP1-216ENST00000556867 LIMCH1Q9UPQ0 1083 aa26.09■■□□□ 1.77
TDP1-216ENST00000556867 A0A1W2PPC1 479 aa26.08■■□□□ 1.77
TDP1-216ENST00000556867 NOP56O00567 594 aaKnown RBP26.08■■□□□ 1.77
TDP1-216ENST00000556867 B4GALT4O60513 344 aa26.08■■□□□ 1.77
TDP1-216ENST00000556867 ATP9AO75110 1047 aa26.08■■□□□ 1.77
TDP1-216ENST00000556867 CYP3A4P08684 503 aa26.08■■□□□ 1.77
TDP1-216ENST00000556867 ZNF286BP0CG31 522 aa26.08■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms