RNA–Protein interactions for RNA: ENST00000556833.1

CHD8-211, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-211ENST00000556833 PCDHA1Q9Y5I3 950 aa17.19■□□□□ 0.34
CHD8-211ENST00000556833 MICAL3Q7RTP6 2002 aa17.19■□□□□ 0.34
CHD8-211ENST00000556833 HIP1O00291 1037 aa17.18■□□□□ 0.34
CHD8-211ENST00000556833 EIF3JO75822 258 aaKnown RBP17.18■□□□□ 0.34
CHD8-211ENST00000556833 RGS20O76081 388 aa17.18■□□□□ 0.34
CHD8-211ENST00000556833 GGPS1O95749 300 aa17.18■□□□□ 0.34
CHD8-211ENST00000556833 HSD17B4P51659 736 aa17.18■□□□□ 0.34
CHD8-211ENST00000556833 SLC35G1Q2M3R5 365 aa17.18■□□□□ 0.34
CHD8-211ENST00000556833 ZNF618Q5T7W0 954 aa17.18■□□□□ 0.34
CHD8-211ENST00000556833 CNKSR3Q6P9H4 555 aa17.18■□□□□ 0.34
CHD8-211ENST00000556833 SESTD1Q86VW0 696 aa17.18■□□□□ 0.34
CHD8-211ENST00000556833 PPTC7Q8NI37 304 aa17.18■□□□□ 0.34
CHD8-211ENST00000556833 SPATA33Q96N06 139 aa17.18■□□□□ 0.34
CHD8-211ENST00000556833 PIGSQ96S52 555 aa17.18■□□□□ 0.34
CHD8-211ENST00000556833 PDCD2LQ9BRP1 358 aa17.18■□□□□ 0.34
CHD8-211ENST00000556833 BCAS3Q9H6U6 928 aa17.18■□□□□ 0.34
CHD8-211ENST00000556833 CTNNA3Q9UI47 895 aa17.18■□□□□ 0.34
CHD8-211ENST00000556833 LPXNO60711 386 aa17.17■□□□□ 0.34
CHD8-211ENST00000556833 F2P00734 622 aa17.17■□□□□ 0.34
CHD8-211ENST00000556833 UBA1P22314 1058 aaKnown RBP17.17■□□□□ 0.34
CHD8-211ENST00000556833 SP2Q02086 613 aa17.17■□□□□ 0.34
CHD8-211ENST00000556833 LAMC2Q13753 1193 aa17.17■□□□□ 0.34
CHD8-211ENST00000556833 MBTPS1Q14703 1052 aa17.17■□□□□ 0.34
CHD8-211ENST00000556833 PGM5Q15124 567 aa17.17■□□□□ 0.34
CHD8-211ENST00000556833 SEC23AQ15436 765 aa17.17■□□□□ 0.34
CHD8-211ENST00000556833 HSDL1Q3SXM5 330 aa17.17■□□□□ 0.34
CHD8-211ENST00000556833 KATNAL1Q9BW62 490 aa17.17■□□□□ 0.34
CHD8-211ENST00000556833 CNNM2Q9H8M5 875 aa17.17■□□□□ 0.34
CHD8-211ENST00000556833 TAF6LQ9Y6J9 622 aa17.17■□□□□ 0.34
CHD8-211ENST00000556833 ZBTB5O15062 677 aa17.16■□□□□ 0.34
CHD8-211ENST00000556833 GSPT1P15170 499 aaKnown RBP17.16■□□□□ 0.34
CHD8-211ENST00000556833 PDE4AP27815 886 aa17.16■□□□□ 0.34
CHD8-211ENST00000556833 TRIM71Q2Q1W2 868 aaKnown RBP17.16■□□□□ 0.34
CHD8-211ENST00000556833 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.16■□□□□ 0.34
CHD8-211ENST00000556833 HAS3O00219 553 aa17.15■□□□□ 0.34
CHD8-211ENST00000556833 IFIT3O14879 490 aaKnown RBP17.15■□□□□ 0.34
CHD8-211ENST00000556833 CTSHP09668 335 aa17.15■□□□□ 0.34
CHD8-211ENST00000556833 THPOP40225 353 aa17.15■□□□□ 0.34
CHD8-211ENST00000556833 PTH1RQ03431 593 aa17.15■□□□□ 0.34
CHD8-211ENST00000556833 PTK7Q13308 1070 aa17.15■□□□□ 0.34
CHD8-211ENST00000556833 AAK1Q2M2I8 961 aa17.15■□□□□ 0.34
CHD8-211ENST00000556833 CELF3Q5SZQ8 465 aaKnown RBP17.15■□□□□ 0.34
CHD8-211ENST00000556833 MYSM1Q5VVJ2 828 aa17.15■□□□□ 0.34
CHD8-211ENST00000556833 TRAF7Q6Q0C0 670 aa17.15■□□□□ 0.34
CHD8-211ENST00000556833 EMID1Q96A84 441 aaPredicted RBP17.15■□□□□ 0.34
CHD8-211ENST00000556833 PALM3A6NDB9 673 aaPredicted RBP17.14■□□□□ 0.33
CHD8-211ENST00000556833 CXCL10P02778 98 aa17.14■□□□□ 0.33
CHD8-211ENST00000556833 CCND2P30279 289 aa17.14■□□□□ 0.33
CHD8-211ENST00000556833 SP4Q02446 784 aa17.14■□□□□ 0.33
CHD8-211ENST00000556833 GRM4Q14833 912 aa17.14■□□□□ 0.33
CHD8-211ENST00000556833 MYOCDQ8IZQ8 938 aa17.14■□□□□ 0.33
CHD8-211ENST00000556833 HLA-CQ95604 372 aa17.14■□□□□ 0.33
CHD8-211ENST00000556833 MTMR8Q96EF0 704 aa17.14■□□□□ 0.33
CHD8-211ENST00000556833 OSBPL7Q9BZF2 842 aa17.14■□□□□ 0.33
CHD8-211ENST00000556833 MLXIPQ9HAP2 919 aa17.14■□□□□ 0.33
CHD8-211ENST00000556833 TELO2Q9Y4R8 837 aa17.14■□□□□ 0.33
CHD8-211ENST00000556833 LINC01553A4QN01 128 aa17.13■□□□□ 0.33
CHD8-211ENST00000556833 GCOM1H8Y6P7 765 aaPredicted RBP17.13■□□□□ 0.33
CHD8-211ENST00000556833 CYTH3O43739 400 aa17.13■□□□□ 0.33
CHD8-211ENST00000556833 GJB5O95377 273 aa17.13■□□□□ 0.33
CHD8-211ENST00000556833 POLR2MP0CAP2 368 aa17.13■□□□□ 0.33
CHD8-211ENST00000556833 POU3F3P20264 500 aaPredicted RBP17.13■□□□□ 0.33
CHD8-211ENST00000556833 RBL2Q08999 1139 aa17.13■□□□□ 0.33
CHD8-211ENST00000556833 TRDNQ13061 729 aa17.13■□□□□ 0.33
CHD8-211ENST00000556833 IKBKEQ14164 716 aa17.13■□□□□ 0.33
CHD8-211ENST00000556833 STOX1Q6ZVD7 989 aa17.13■□□□□ 0.33
CHD8-211ENST00000556833 VSIG10LQ86VR7 867 aa17.13■□□□□ 0.33
CHD8-211ENST00000556833 TRIM50Q86XT4 487 aa17.13■□□□□ 0.33
CHD8-211ENST00000556833 MYL10Q9BUA6 226 aa17.13■□□□□ 0.33
CHD8-211ENST00000556833 SUGCTQ9HAC7 445 aa17.13■□□□□ 0.33
CHD8-211ENST00000556833 RTEL1Q9NZ71 1219 aa17.13■□□□□ 0.33
CHD8-211ENST00000556833 NLRC5Q86WI3 1866 aa17.13■□□□□ 0.33
CHD8-211ENST00000556833 ABHD14A-ACY1A0A1B0GW23 586 aa17.12■□□□□ 0.33
CHD8-211ENST00000556833 C17orf102A2RUQ5 167 aa17.12■□□□□ 0.33
CHD8-211ENST00000556833 LGR5O75473 907 aa17.12■□□□□ 0.33
CHD8-211ENST00000556833 CYP21A2P08686 494 aa17.12■□□□□ 0.33
CHD8-211ENST00000556833 SMIM10L2AP0DMW4 78 aa17.12■□□□□ 0.33
CHD8-211ENST00000556833 SMIM10L2BP0DMW5 78 aa17.12■□□□□ 0.33
CHD8-211ENST00000556833 IRX6P78412 446 aaPredicted RBP17.12■□□□□ 0.33
CHD8-211ENST00000556833 WTAPQ15007 396 aa17.12■□□□□ 0.33
CHD8-211ENST00000556833 TTC22Q5TAA0 569 aa17.12■□□□□ 0.33
CHD8-211ENST00000556833 DBF4BQ8NFT6 615 aa17.12■□□□□ 0.33
CHD8-211ENST00000556833 ATP6V0A1Q93050 837 aa17.12■□□□□ 0.33
CHD8-211ENST00000556833 TGS1Q96RS0 853 aaKnown RBP17.12■□□□□ 0.33
CHD8-211ENST00000556833 RAD9AQ99638 391 aa17.12■□□□□ 0.33
CHD8-211ENST00000556833 C17orf80Q9BSJ5 609 aa17.12■□□□□ 0.33
CHD8-211ENST00000556833 C16orf70Q9BSU1 422 aa17.12■□□□□ 0.33
CHD8-211ENST00000556833 EPHX3Q9H6B9 360 aa17.12■□□□□ 0.33
CHD8-211ENST00000556833 KAT6AQ92794 2004 aa17.12■□□□□ 0.33
CHD8-211ENST00000556833 ERICH2A1L162 156 aa17.11■□□□□ 0.33
CHD8-211ENST00000556833 RSPH10B2B2RC85 870 aa17.11■□□□□ 0.33
CHD8-211ENST00000556833 NOP56O00567 594 aaKnown RBP17.11■□□□□ 0.33
CHD8-211ENST00000556833 TREHO43280 583 aa17.11■□□□□ 0.33
CHD8-211ENST00000556833 UPP2O95045 317 aa17.11■□□□□ 0.33
CHD8-211ENST00000556833 LGALS2P05162 132 aa17.11■□□□□ 0.33
CHD8-211ENST00000556833 RSPH10BP0C881 870 aa17.11■□□□□ 0.33
CHD8-211ENST00000556833 NT5C2P49902 561 aa17.11■□□□□ 0.33
CHD8-211ENST00000556833 AAMPQ13685 434 aa17.11■□□□□ 0.33
CHD8-211ENST00000556833 UTP14CQ5TAP6 766 aaKnown RBP17.11■□□□□ 0.33
CHD8-211ENST00000556833 CYFIP1Q7L576 1253 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms