RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 CACNB1Q02641 598 aaPredicted RBP20.46■□□□□ 0.87
SDR39U1-220ENST00000556548 CATSPER3Q86XQ3 398 aa20.46■□□□□ 0.87
SDR39U1-220ENST00000556548 C16orf45Q96MC5 204 aaPredicted RBP20.46■□□□□ 0.87
SDR39U1-220ENST00000556548 SRRTQ9BXP5 876 aaKnown RBP20.46■□□□□ 0.87
SDR39U1-220ENST00000556548 NT5C3AQ9H0P0 336 aa20.46■□□□□ 0.87
SDR39U1-220ENST00000556548 KDM3AQ9Y4C1 1321 aa20.46■□□□□ 0.87
SDR39U1-220ENST00000556548 CYP4A11Q02928 519 aa20.45■□□□□ 0.87
SDR39U1-220ENST00000556548 TCP11X2Q5H9J9 407 aa20.45■□□□□ 0.87
SDR39U1-220ENST00000556548 CNNM4Q6P4Q7 775 aa20.45■□□□□ 0.87
SDR39U1-220ENST00000556548 UNC13DQ70J99 1090 aa20.45■□□□□ 0.87
SDR39U1-220ENST00000556548 IRF2BP1Q8IU81 584 aa20.45■□□□□ 0.87
SDR39U1-220ENST00000556548 WNK4Q96J92 1243 aa20.45■□□□□ 0.87
SDR39U1-220ENST00000556548 TBX3O15119 743 aa20.45■□□□□ 0.86
SDR39U1-220ENST00000556548 CHMP2AO43633 222 aa20.45■□□□□ 0.86
SDR39U1-220ENST00000556548 PLA2G4BP0C869 781 aa20.45■□□□□ 0.86
SDR39U1-220ENST00000556548 PSMC6P62333 389 aa20.45■□□□□ 0.86
SDR39U1-220ENST00000556548 ANKRD40Q6AI12 368 aa20.45■□□□□ 0.86
SDR39U1-220ENST00000556548 GLIS3Q8NEA6 775 aa20.45■□□□□ 0.86
SDR39U1-220ENST00000556548 FAM20AQ96MK3 541 aa20.45■□□□□ 0.86
SDR39U1-220ENST00000556548 CTAGE1Q96RT6 745 aa20.45■□□□□ 0.86
SDR39U1-220ENST00000556548 RNF181Q9P0P0 153 aa20.45■□□□□ 0.86
SDR39U1-220ENST00000556548 HMGCS2P54868 508 aa20.44■□□□□ 0.86
SDR39U1-220ENST00000556548 BACE1P56817 501 aa20.44■□□□□ 0.86
SDR39U1-220ENST00000556548 LRRC41Q15345 812 aa20.44■□□□□ 0.86
SDR39U1-220ENST00000556548 FILIP1LQ4L180 1135 aa20.44■□□□□ 0.86
SDR39U1-220ENST00000556548 MUM1L1Q5H9M0 696 aa20.44■□□□□ 0.86
SDR39U1-220ENST00000556548 HYIQ5T013 277 aa20.44■□□□□ 0.86
SDR39U1-220ENST00000556548 TTI2Q6NXR4 508 aa20.44■□□□□ 0.86
SDR39U1-220ENST00000556548 CPLX3Q8WVH0 158 aa20.44■□□□□ 0.86
SDR39U1-220ENST00000556548 COL20A1Q9P218 1284 aa20.44■□□□□ 0.86
SDR39U1-220ENST00000556548 ZNF112Q9UJU3 913 aa20.44■□□□□ 0.86
SDR39U1-220ENST00000556548 VAV3Q9UKW4 847 aa20.44■□□□□ 0.86
SDR39U1-220ENST00000556548 CTDP1Q9Y5B0 961 aaPredicted RBP20.44■□□□□ 0.86
SDR39U1-220ENST00000556548 EML1O00423 815 aa20.44■□□□□ 0.86
SDR39U1-220ENST00000556548 N4BP3O15049 544 aa20.44■□□□□ 0.86
SDR39U1-220ENST00000556548 TBX2Q13207 712 aaPredicted RBP20.44■□□□□ 0.86
SDR39U1-220ENST00000556548 ZNF280CQ8ND82 737 aa20.44■□□□□ 0.86
SDR39U1-220ENST00000556548 CLEC4DQ8WXI8 215 aa20.44■□□□□ 0.86
SDR39U1-220ENST00000556548 P2RX5Q93086 422 aa20.44■□□□□ 0.86
SDR39U1-220ENST00000556548 DHTKD1Q96HY7 919 aaPredicted RBP20.44■□□□□ 0.86
SDR39U1-220ENST00000556548 DUSP9Q99956 384 aaKnown RBP20.44■□□□□ 0.86
SDR39U1-220ENST00000556548 SLC38A10Q9HBR0 1119 aa20.44■□□□□ 0.86
SDR39U1-220ENST00000556548 TBC1D7Q9P0N9 293 aa20.44■□□□□ 0.86
SDR39U1-220ENST00000556548 LIMA1Q9UHB6 759 aaKnown RBP20.44■□□□□ 0.86
SDR39U1-220ENST00000556548 PPP1R9AQ9ULJ8 1098 aa20.44■□□□□ 0.86
SDR39U1-220ENST00000556548 HAUS3Q68CZ6 603 aa20.43■□□□□ 0.86
SDR39U1-220ENST00000556548 GPBP1Q86WP2 473 aa20.43■□□□□ 0.86
SDR39U1-220ENST00000556548 CSGALNACT2Q8N6G5 542 aa20.43■□□□□ 0.86
SDR39U1-220ENST00000556548 GINM1Q9NU53 330 aa20.43■□□□□ 0.86
SDR39U1-220ENST00000556548 RGL1Q9NZL6 768 aa20.43■□□□□ 0.86
SDR39U1-220ENST00000556548 PVALEFA0A1B0GWK0 134 aa20.43■□□□□ 0.86
SDR39U1-220ENST00000556548 PES1O00541 588 aaKnown RBP20.43■□□□□ 0.86
SDR39U1-220ENST00000556548 SPATA31C1P0DKV0 1188 aa20.43■□□□□ 0.86
SDR39U1-220ENST00000556548 COPB1P53618 953 aaKnown RBP20.43■□□□□ 0.86
SDR39U1-220ENST00000556548 USP14P54578 494 aa20.43■□□□□ 0.86
SDR39U1-220ENST00000556548 CEP135Q66GS9 1140 aa20.43■□□□□ 0.86
SDR39U1-220ENST00000556548 ERMNQ8TAM6 284 aa20.43■□□□□ 0.86
SDR39U1-220ENST00000556548 DNAJC19Q96DA6 116 aa20.43■□□□□ 0.86
SDR39U1-220ENST00000556548 ATG4CQ96DT6 458 aa20.43■□□□□ 0.86
SDR39U1-220ENST00000556548 KLRG1Q96E93 195 aa20.43■□□□□ 0.86
SDR39U1-220ENST00000556548 ARP10275 920 aa20.42■□□□□ 0.86
SDR39U1-220ENST00000556548 CCNE1P24864 410 aa20.42■□□□□ 0.86
SDR39U1-220ENST00000556548 PABPC4Q13310 644 aaKnown RBP eCLIP20.42■□□□□ 0.86
SDR39U1-220ENST00000556548 ANKRD20A12PQ8NF67 263 aa20.42■□□□□ 0.86
SDR39U1-220ENST00000556548 LRRC27Q9C0I9 530 aa20.42■□□□□ 0.86
SDR39U1-220ENST00000556548 SEMA6BQ9H3T3 888 aa20.42■□□□□ 0.86
SDR39U1-220ENST00000556548 PKD2L1Q9P0L9 805 aa20.42■□□□□ 0.86
SDR39U1-220ENST00000556548 CEP55Q53EZ4 464 aa20.42■□□□□ 0.86
SDR39U1-220ENST00000556548 LRCH2Q5VUJ6 765 aa20.42■□□□□ 0.86
SDR39U1-220ENST00000556548 EHMT1Q9H9B1 1298 aa20.42■□□□□ 0.86
SDR39U1-220ENST00000556548 AS3MTQ9HBK9 375 aa20.42■□□□□ 0.86
SDR39U1-220ENST00000556548 PANK4Q9NVE7 773 aa20.42■□□□□ 0.86
SDR39U1-220ENST00000556548 HSD17B4P51659 736 aa20.41■□□□□ 0.86
SDR39U1-220ENST00000556548 COASYQ13057 564 aa20.41■□□□□ 0.86
SDR39U1-220ENST00000556548 SEMA3FQ13275 785 aa20.41■□□□□ 0.86
SDR39U1-220ENST00000556548 TC2NQ8N9U0 490 aa20.41■□□□□ 0.86
SDR39U1-220ENST00000556548 IL31RAQ8NI17 732 aa20.41■□□□□ 0.86
SDR39U1-220ENST00000556548 EIF2AK1Q9BQI3 630 aaKnown RBP20.41■□□□□ 0.86
SDR39U1-220ENST00000556548 SYT17Q9BSW7 474 aa20.41■□□□□ 0.86
SDR39U1-220ENST00000556548 ZHX3Q9H4I2 956 aa20.41■□□□□ 0.86
SDR39U1-220ENST00000556548 BMP2KQ9NSY1 1161 aaPredicted RBP20.41■□□□□ 0.86
SDR39U1-220ENST00000556548 KRT18P05783 430 aaKnown RBP20.41■□□□□ 0.86
SDR39U1-220ENST00000556548 YBX3P16989 372 aaKnown RBP eCLIP20.41■□□□□ 0.86
SDR39U1-220ENST00000556548 RPA1P27694 616 aa20.41■□□□□ 0.86
SDR39U1-220ENST00000556548 SPAG1Q07617 926 aa20.41■□□□□ 0.86
SDR39U1-220ENST00000556548 RBL2Q08999 1139 aa20.41■□□□□ 0.86
SDR39U1-220ENST00000556548 SMAP1Q8IYB5 467 aaPredicted RBP20.41■□□□□ 0.86
SDR39U1-220ENST00000556548 PURBQ96QR8 312 aaKnown RBP20.41■□□□□ 0.86
SDR39U1-220ENST00000556548 FGFBP2Q9BYJ0 223 aa20.41■□□□□ 0.86
SDR39U1-220ENST00000556548 POLD4Q9HCU8 107 aa20.41■□□□□ 0.86
SDR39U1-220ENST00000556548 SSC5DA1L4H1 1573 aa20.4■□□□□ 0.86
SDR39U1-220ENST00000556548 LRRC10BA6NIK2 292 aa20.4■□□□□ 0.86
SDR39U1-220ENST00000556548 NRDCO43847 1150 aa20.4■□□□□ 0.86
SDR39U1-220ENST00000556548 ZBED4O75132 1171 aa20.4■□□□□ 0.86
SDR39U1-220ENST00000556548 CYP11B2P19099 503 aa20.4■□□□□ 0.86
SDR39U1-220ENST00000556548 PBX1P40424 430 aa20.4■□□□□ 0.86
SDR39U1-220ENST00000556548 CTTNQ14247 550 aaKnown RBP20.4■□□□□ 0.86
SDR39U1-220ENST00000556548 ARSHQ5FYA8 562 aa20.4■□□□□ 0.86
SDR39U1-220ENST00000556548 E4F1Q66K89 784 aaPredicted RBP20.4■□□□□ 0.86
SDR39U1-220ENST00000556548 OTOP1Q7RTM1 612 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms