RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 NAALADL2Q58DX5 795 aa5.64□□□□□ -1.51
TMEM260-210ENST00000556422 OLFML1Q6UWY5 402 aa5.64□□□□□ -1.51
TMEM260-210ENST00000556422 GBP6Q6ZN66 633 aa5.64□□□□□ -1.51
TMEM260-210ENST00000556422 OTUD6AQ7L8S5 288 aa5.64□□□□□ -1.51
TMEM260-210ENST00000556422 APTXQ7Z2E3 356 aaKnown RBP5.64□□□□□ -1.51
TMEM260-210ENST00000556422 NCAPG2Q86XI2 1143 aa5.64□□□□□ -1.51
TMEM260-210ENST00000556422 TRMT44Q8IYL2 757 aaKnown RBP5.64□□□□□ -1.51
TMEM260-210ENST00000556422 GABPB2Q8TAK5 448 aaPredicted RBP5.64□□□□□ -1.51
TMEM260-210ENST00000556422 LRRC15Q8TF66 581 aa5.64□□□□□ -1.51
TMEM260-210ENST00000556422 CTNNBL1Q8WYA6 563 aaPredicted RBP5.64□□□□□ -1.51
TMEM260-210ENST00000556422 DHX38Q92620 1227 aaKnown RBP5.64□□□□□ -1.51
TMEM260-210ENST00000556422 PRIMPOLQ96LW4 560 aa5.64□□□□□ -1.51
TMEM260-210ENST00000556422 ZMYND12Q9H0C1 365 aa5.64□□□□□ -1.51
TMEM260-210ENST00000556422 TMEM60Q9H2L4 133 aa5.64□□□□□ -1.51
TMEM260-210ENST00000556422 DNAJC18Q9H819 358 aa5.64□□□□□ -1.51
TMEM260-210ENST00000556422 IFT122Q9HBG6 1241 aa5.64□□□□□ -1.51
TMEM260-210ENST00000556422 IMPACTQ9P2X3 320 aa5.64□□□□□ -1.51
TMEM260-210ENST00000556422 TTF2Q9UNY4 1162 aaKnown RBP5.64□□□□□ -1.51
TMEM260-210ENST00000556422 LINC00854A0A1B0GVQ3 168 aa5.64□□□□□ -1.51
TMEM260-210ENST00000556422 TRIM66O15016 1216 aa5.64□□□□□ -1.51
TMEM260-210ENST00000556422 FAM163BP0C2L3 166 aa5.64□□□□□ -1.51
TMEM260-210ENST00000556422 SNHG28P0DPA3 235 aa5.64□□□□□ -1.51
TMEM260-210ENST00000556422 PDHBP11177 359 aa5.64□□□□□ -1.51
TMEM260-210ENST00000556422 AKR1B1P15121 316 aa5.64□□□□□ -1.51
TMEM260-210ENST00000556422 CALML3P27482 149 aa5.64□□□□□ -1.51
TMEM260-210ENST00000556422 CDC25AP30304 524 aa5.64□□□□□ -1.51
TMEM260-210ENST00000556422 SCNN1DP51172 638 aa5.64□□□□□ -1.51
TMEM260-210ENST00000556422 DMPKQ09013 629 aa5.64□□□□□ -1.51
TMEM260-210ENST00000556422 CUL4BQ13620 913 aa5.64□□□□□ -1.51
TMEM260-210ENST00000556422 TBC1D10BQ4KMP7 808 aaPredicted RBP5.64□□□□□ -1.51
TMEM260-210ENST00000556422 CCDC174Q6PII3 467 aa5.64□□□□□ -1.51
TMEM260-210ENST00000556422 DPP8Q6V1X1 898 aaPredicted RBP5.64□□□□□ -1.51
TMEM260-210ENST00000556422 ANKRD13BQ86YJ7 626 aa5.64□□□□□ -1.51
TMEM260-210ENST00000556422 EFCAB13Q8IY85 973 aa5.64□□□□□ -1.51
TMEM260-210ENST00000556422 MYOCDQ8IZQ8 938 aa5.64□□□□□ -1.51
TMEM260-210ENST00000556422 SMARCE1Q969G3 411 aa5.64□□□□□ -1.51
TMEM260-210ENST00000556422 MASTLQ96GX5 879 aa5.64□□□□□ -1.51
TMEM260-210ENST00000556422 DHRS1Q96LJ7 313 aa5.64□□□□□ -1.51
TMEM260-210ENST00000556422 ZC3H12CQ9C0D7 883 aaKnown RBP5.64□□□□□ -1.51
TMEM260-210ENST00000556422 ZNF287Q9HBT7 754 aa5.64□□□□□ -1.51
TMEM260-210ENST00000556422 MTMR4Q9NYA4 1195 aa5.64□□□□□ -1.51
TMEM260-210ENST00000556422 TBC1D7Q9P0N9 293 aa5.64□□□□□ -1.51
TMEM260-210ENST00000556422 GJA3Q9Y6H8 435 aa5.64□□□□□ -1.51
TMEM260-210ENST00000556422 USP17L5A8MUK1 530 aa5.64□□□□□ -1.51
TMEM260-210ENST00000556422 EDIL3O43854 480 aa5.64□□□□□ -1.51
TMEM260-210ENST00000556422 ZNF189O75820 626 aaPredicted RBP5.64□□□□□ -1.51
TMEM260-210ENST00000556422 SNUPNO95149 360 aaKnown RBP5.64□□□□□ -1.51
TMEM260-210ENST00000556422 SHMT1P34896 483 aa5.64□□□□□ -1.51
TMEM260-210ENST00000556422 AFMP43652 599 aa5.64□□□□□ -1.51
TMEM260-210ENST00000556422 GNAQP50148 359 aa5.64□□□□□ -1.51
TMEM260-210ENST00000556422 HSP90AA4PQ58FG1 418 aa5.64□□□□□ -1.51
TMEM260-210ENST00000556422 CFAP58Q5T655 872 aa5.64□□□□□ -1.51
TMEM260-210ENST00000556422 ARL6IP4Q66PJ3 421 aaKnown RBP5.64□□□□□ -1.51
TMEM260-210ENST00000556422 CDC42EP5Q6NZY7 148 aa5.64□□□□□ -1.51
TMEM260-210ENST00000556422 TMC6Q7Z403 805 aa5.64□□□□□ -1.51
TMEM260-210ENST00000556422 HEATR3Q7Z4Q2 680 aa5.64□□□□□ -1.51
TMEM260-210ENST00000556422 SUGP1Q8IWZ8 645 aaKnown RBP5.64□□□□□ -1.51
TMEM260-210ENST00000556422 MLKLQ8NB16 471 aa5.64□□□□□ -1.51
TMEM260-210ENST00000556422 SLC43A3Q8NBI5 491 aa5.64□□□□□ -1.51
TMEM260-210ENST00000556422 MIPOL1Q8TD10 442 aa5.64□□□□□ -1.51
TMEM260-210ENST00000556422 WHAMMQ8TF30 809 aa5.64□□□□□ -1.51
TMEM260-210ENST00000556422 STAMQ92783 540 aa5.64□□□□□ -1.51
TMEM260-210ENST00000556422 CENPTQ96BT3 561 aa5.64□□□□□ -1.51
TMEM260-210ENST00000556422 C16orf45Q96MC5 204 aaPredicted RBP5.64□□□□□ -1.51
TMEM260-210ENST00000556422 DBNDD1Q9H9R9 158 aa5.64□□□□□ -1.51
TMEM260-210ENST00000556422 KCND1Q9NSA2 647 aa5.64□□□□□ -1.51
TMEM260-210ENST00000556422 BOLA2-SMG1P6H3BVE0 249 aa5.63□□□□□ -1.51
TMEM260-210ENST00000556422 TOP1P11387 765 aaKnown RBP5.63□□□□□ -1.51
TMEM260-210ENST00000556422 ALDH1B1P30837 517 aa5.63□□□□□ -1.51
TMEM260-210ENST00000556422 KANK3Q6NY19 840 aa5.63□□□□□ -1.51
TMEM260-210ENST00000556422 SNX32Q86XE0 403 aa5.63□□□□□ -1.51
TMEM260-210ENST00000556422 ZFPM1Q8IX07 1006 aa5.63□□□□□ -1.51
TMEM260-210ENST00000556422 SMYD4Q8IYR2 804 aaPredicted RBP5.63□□□□□ -1.51
TMEM260-210ENST00000556422 RNF168Q8IYW5 571 aaPredicted RBP5.63□□□□□ -1.51
TMEM260-210ENST00000556422 RIOX1Q9H6W3 641 aa5.63□□□□□ -1.51
TMEM260-210ENST00000556422 AS3MTQ9HBK9 375 aa5.63□□□□□ -1.51
TMEM260-210ENST00000556422 NFE2L3Q9Y4A8 694 aa5.63□□□□□ -1.51
TMEM260-210ENST00000556422 PP2D1A8MPX8 630 aa5.63□□□□□ -1.51
TMEM260-210ENST00000556422 NEMFO60524 1076 aa5.63□□□□□ -1.51
TMEM260-210ENST00000556422 B3GALNT1O75752 331 aa5.63□□□□□ -1.51
TMEM260-210ENST00000556422 CSPG5O95196 566 aa5.63□□□□□ -1.51
TMEM260-210ENST00000556422 PARP1P09874 1014 aaKnown RBP5.63□□□□□ -1.51
TMEM260-210ENST00000556422 TGFB3P10600 412 aa5.63□□□□□ -1.51
TMEM260-210ENST00000556422 UBASH3AP57075 661 aa5.63□□□□□ -1.51
TMEM260-210ENST00000556422 POLR2FP61218 127 aaKnown RBP5.63□□□□□ -1.51
TMEM260-210ENST00000556422 SKIV2LQ15477 1246 aaKnown RBP5.63□□□□□ -1.51
TMEM260-210ENST00000556422 SHROOM1Q2M3G4 852 aaPredicted RBP5.63□□□□□ -1.51
TMEM260-210ENST00000556422 E4F1Q66K89 784 aaPredicted RBP5.63□□□□□ -1.51
TMEM260-210ENST00000556422 HHIPL2Q6UWX4 724 aa5.63□□□□□ -1.51
TMEM260-210ENST00000556422 TMEM139Q8IV31 216 aa5.63□□□□□ -1.51
TMEM260-210ENST00000556422 VSTM4Q8IW00 320 aa5.63□□□□□ -1.51
TMEM260-210ENST00000556422 SAMD14Q8IZD0 417 aaPredicted RBP5.63□□□□□ -1.51
TMEM260-210ENST00000556422 USP33Q8TEY7 942 aa5.63□□□□□ -1.51
TMEM260-210ENST00000556422 PIGSQ96S52 555 aa5.63□□□□□ -1.51
TMEM260-210ENST00000556422 SAMSN1Q9NSI8 373 aaKnown RBP5.63□□□□□ -1.51
TMEM260-210ENST00000556422 SERPINB13Q9UIV8 391 aa5.63□□□□□ -1.51
TMEM260-210ENST00000556422 HOOK1Q9UJC3 728 aaKnown RBP5.63□□□□□ -1.51
TMEM260-210ENST00000556422 SERPINA10Q9UK55 444 aa5.63□□□□□ -1.51
TMEM260-210ENST00000556422 COL4A5P29400 1685 aa5.63□□□□□ -1.51
TMEM260-210ENST00000556422 KIF13BQ9NQT8 1826 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms